| GenBank top hits | e value | %identity | Alignment |
|---|
| AQA29583.1 reverse transcriptase [Zea mays] | 2.7e-73 | 33.5 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARC-------------------
MP FW EA T V+LLNR+PT +L+ +TP++AWY KKPA+H +VFGC Y+K RPHL+ L+ RG KVV IGY+ G++
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARC-------------------
Query: ---------------------------------------------------------------------------TSSMILRGASSRVARRHLQREHLLA
TS+ ++ + R H++ L+
Subjt: ---------------------------------------------------------------------------TSSMILRGASSRVARRHLQREHLLA
Query: VERCTGG----------MEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRS--YEAQ
+ ++++ G PG +++ AELH +S ++ EA+ P W+ +AIG Y+ +
Subjt: VERCTGG----------MEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRS--YEAQ
Query: GPSGDEGLR----------PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH---
D ++ Q+ VDF+EVFAPVAR + VRLLL I AH+ W VH+MDVK AFLN EL+E +YV+Q GF+ + KVLRLHKAL+
Subjt: GPSGDEGLR----------PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH---
Query: ---------------------C------------EHRLIVGVYVDDLLITRGD----------------------------MKVLGDSRG------AYAK
C E RLIVGVYVDDL+IT GD ++V ++G AYA
Subjt: ---------------------C------------EHRLIVGVYVDDLLITRGD----------------------------MKVLGDSRG------AYAK
Query: KLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKY-CVGRG
K+L+ AGLA N + TPME +L+L K TT +VD T YRS++ SLRYL N+ PDLAY VGY+SRFMEA R+EHL AVKR+LRYVAGT W + Y G+
Subjt: KLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKY-CVGRG
Query: KEKLELVGYNDSDMAGDV
+ +L+GY+DSD+AGDV
Subjt: KEKLELVGYNDSDMAGDV
|
|
| CAD41367.2 OSJNBa0088A01.6 [Oryza sativa Japonica Group] | 5.9e-73 | 36.84 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
MP R+W EA T V+LLNR+PT+SL TP+EAW+ KKPA+ + R FGC Y+K RPHL L R +V IGY GA+ +V+R +
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
Query: REHL--------------------LAVERCTGG-------------------MEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL--
E VE T G M DL+G PG A R EE ELH ++ ++ F EAE++ W
Subjt: REHL--------------------LAVERCTGG-------------------MEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL--
Query: -----------------------KAIGRSY------EAQGPSGDEGLR------PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLN
+AIG + +A+G R Q+ +DFEEVF PVARL+ VRLLL A W VH+MDVK AFLN
Subjt: -----------------------KAIGRSY------EAQGPSGDEGLR------PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLN
Query: RELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------CEH----------RLIVGVYVDDLLIT----------RGDMK
EL E +YV+Q GF+ +VLRL KAL+ CEH RL+VGVYVDDL+IT +G+MK
Subjt: RELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------CEH----------RLIVGVYVDDLLIT----------RGDMK
Query: VLGD------------------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRF
L S+ AYA+++L+ AG+ NP+ TPME RL+L K +V+ T YR IV LRYLV+T PD+A+ VGYVSRF
Subjt: VLGD------------------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRF
Query: MEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
MEA EH AVKRILRY+AGT + Y + ++LVGY+D+DMAGD
Subjt: MEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
|
|
| CAE03692.2 OSJNBb0026E15.10 [Oryza sativa Japonica Group] | 1.1e-79 | 36.68 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
+P RFW EA T V+LLNRSPT+SLD +TP+EAWY + PA+H R FGC ++K+ +P L LD R +V +GYE G++ + + S RV H+
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
Query: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
R+ + AVE T +D
Subjt: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
Query: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRSYEAQGPSGDEGL------------R
L+G PPG A R LE+ ELH +S D+ AEAE P W +AIG + + ++G
Subjt: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRSYEAQGPSGDEGL------------R
Query: PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH----------------------
Q+Q VDF+EVFA VARL+ VRLLL + AH W+VH+MDVK AFLN EL E +YV Q GF+ +++ +KV RLHKAL+
Subjt: PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH----------------------
Query: ----CEH----------RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPME
EH RL+VGVYVDDL+IT +G+M +V DS G AYA K+L+ AGL D NP +TPME
Subjt: ----CEH----------RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPME
Query: ARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
RL+LRK VD+T YRS+V SLRYLVNT PDLA+ VGYVSRFME+ RE+HL AV+RILRYVAGTR W +++ G LVGY+DSD+AGD
Subjt: ARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
|
|
| CAH66352.1 OSIGBa0135C09.3 [Oryza sativa] | 8.3e-83 | 38.38 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
+P RFW EA T V+LLNRSPT+SLD +TP+EAWY ++PA+H R FGC ++K+ +P L LD R +V +GYE G++ + + S RV H+
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
Query: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
R+ + AVE T +D
Subjt: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
Query: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKAIGRSYEA----------QGPSGDE--GLR---------PQKQVVDFEEVFAPVA
L+G PPG A R LE+ ELH +S D+ AEAE P W A+ A P G GL+ Q+Q VDF+EVFAPVA
Subjt: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKAIGRSYEA----------QGPSGDE--GLR---------PQKQVVDFEEVFAPVA
Query: RLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------CEH---------
RL+ VRLLL I AH W+VH+MDVK AFLN EL E +YV Q GF+ +++ +KV RLHKAL+ EH
Subjt: RLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------CEH---------
Query: -RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDS
RL VGVYVDDL+IT +G+M +V DS G AYA K+L+ AGL D NP +TPME RL+LRK VD+
Subjt: -RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDS
Query: TNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
T YRS+V SLRYLVNT PDLA+ VGYVSRFME+ RE+HL AV+RILRYVAGTR W +++ G LVGY+DSD+AGD
Subjt: TNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
|
|
| XP_023521510.1 uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo] | 4.7e-86 | 39.7 | Show/hide |
Query: LNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGAR---------------------------------CTS
+NRSPTR L KT +EAWYNKK A+HH RVF C YMKV PHLA LDPRGLKVV IGYEP ++ TS
Subjt: LNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGAR---------------------------------CTS
Query: SMI----LRGASSRVARRHLQREHLLAVERCTGGMEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKA-------------IGRSY
+ + + A+ R A L +H + M+DLVG GEPPG A R+LEE V ELHAISTD+ N FA+AER PC LK + +
Subjt: SMI----LRGASSRVARRHLQREHLLAVERCTGGMEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKA-------------IGRSY
Query: EAQGPSG-----DEGLRPQ---------------------------------------------------------------------------------
+ Q P G + G P
Subjt: EAQGPSG-----DEGLRPQ---------------------------------------------------------------------------------
Query: ------------------------------------------KQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSG
KQ VDFEEVFA V RL+FVRLLL I H SWEVH+MDVK FLN ELKETI V+Q G
Subjt: ------------------------------------------KQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSG
Query: FLGNDNPDKVLRLHKAL------------------------------------HCEHRLIVGVYVDDLLITRGDMKVLGD--------------------
FL NDNP KVLRLHKAL H E RLI+GVYVDDL+IT GDM+VLG
Subjt: FLGNDNPDKVLRLHKAL------------------------------------HCEHRLIVGVYVDDLLITRGDMKVLGD--------------------
Query: --------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKR
+ AYAKKLLDT GLADSNPTR PMEARLQLRKA TT VD+TNY +IV SL YLVNT PDL Y VGYVSRFMEA R+EHLVA K
Subjt: --------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKR
Query: ILRYVAG
ILRYVAG
Subjt: ILRYVAG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1P8YYM3 Reverse transcriptase | 1.3e-73 | 33.5 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARC-------------------
MP FW EA T V+LLNR+PT +L+ +TP++AWY KKPA+H +VFGC Y+K RPHL+ L+ RG KVV IGY+ G++
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARC-------------------
Query: ---------------------------------------------------------------------------TSSMILRGASSRVARRHLQREHLLA
TS+ ++ + R H++ L+
Subjt: ---------------------------------------------------------------------------TSSMILRGASSRVARRHLQREHLLA
Query: VERCTGG----------MEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRS--YEAQ
+ ++++ G PG +++ AELH +S ++ EA+ P W+ +AIG Y+ +
Subjt: VERCTGG----------MEDLVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRS--YEAQ
Query: GPSGDEGLR----------PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH---
D ++ Q+ VDF+EVFAPVAR + VRLLL I AH+ W VH+MDVK AFLN EL+E +YV+Q GF+ + KVLRLHKAL+
Subjt: GPSGDEGLR----------PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH---
Query: ---------------------C------------EHRLIVGVYVDDLLITRGD----------------------------MKVLGDSRG------AYAK
C E RLIVGVYVDDL+IT GD ++V ++G AYA
Subjt: ---------------------C------------EHRLIVGVYVDDLLITRGD----------------------------MKVLGDSRG------AYAK
Query: KLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKY-CVGRG
K+L+ AGLA N + TPME +L+L K TT +VD T YRS++ SLRYL N+ PDLAY VGY+SRFMEA R+EHL AVKR+LRYVAGT W + Y G+
Subjt: KLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKY-CVGRG
Query: KEKLELVGYNDSDMAGDV
+ +L+GY+DSD+AGDV
Subjt: KEKLELVGYNDSDMAGDV
|
|
| A0A7I8IFL9 Hypothetical protein | 7.1e-72 | 34.2 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
+P FW EA T VY+LNR PT+S+D TP E W+ KKPA+HH +VFGC Y+ PHL L+ RG K++ IGYE G++ R R H+
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
Query: R--------------EHLLAVERCTGG----------------------------------------------------------------------MED
R + + +E G +++
Subjt: R--------------EHLLAVERCTGG----------------------------------------------------------------------MED
Query: LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLK-------------------------AIGRSYEAQGPSGDEGL------------RP
+VG P G A+R L K ELHA+S+D+ F EAE P W K AIG + + + G
Subjt: LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLK-------------------------AIGRSYEAQGPSGDEGL------------RP
Query: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALHCEH--------------------
Q+Q +D++EVFAPVARL VRLL+ + AH WEVH+MDVK AFLN +LKE +YV Q +GF+ N KV +L KAL+ H
Subjt: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALHCEH--------------------
Query: ----------------RLIVGVYVDDLLITRGDMKVLGDSRGAYAKKLLDTAGLADSNPTR---------------TPMEARLQLRKADTTMAVDSTNYR
+L+VGVYVDDL+I D + K++ D ++D R PM RL+L K T VD+T YR
Subjt: ----------------RLIVGVYVDDLLITRGDMKVLGDSRGAYAKKLLDTAGLADSNPTR---------------TPMEARLQLRKADTTMAVDSTNYR
Query: SIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEK-LELVGYNDSDMAGDV
SIV SLRYLVNT PDLA+ VGYVSRF+E R++HL AVK+ILRYVAGT+ W ++Y R KEK ++L G++DSD AGDV
Subjt: SIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEK-LELVGYNDSDMAGDV
|
|
| A0B9X7 OSIGBa0135C09.3 protein | 4.0e-83 | 38.38 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
+P RFW EA T V+LLNRSPT+SLD +TP+EAWY ++PA+H R FGC ++K+ +P L LD R +V +GYE G++ + + S RV H+
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
Query: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
R+ + AVE T +D
Subjt: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
Query: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKAIGRSYEA----------QGPSGDE--GLR---------PQKQVVDFEEVFAPVA
L+G PPG A R LE+ ELH +S D+ AEAE P W A+ A P G GL+ Q+Q VDF+EVFAPVA
Subjt: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKAIGRSYEA----------QGPSGDE--GLR---------PQKQVVDFEEVFAPVA
Query: RLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------CEH---------
RL+ VRLLL I AH W+VH+MDVK AFLN EL E +YV Q GF+ +++ +KV RLHKAL+ EH
Subjt: RLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------CEH---------
Query: -RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDS
RL VGVYVDDL+IT +G+M +V DS G AYA K+L+ AGL D NP +TPME RL+LRK VD+
Subjt: -RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDS
Query: TNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
T YRS+V SLRYLVNT PDLA+ VGYVSRFME+ RE+HL AV+RILRYVAGTR W +++ G LVGY+DSD+AGD
Subjt: TNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
|
|
| C7J2T2 Os05g0126900 protein | 2.1e-71 | 34.62 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGA---RCTSSMILRGASSR----
+P FW EA T VYLLNRS ++S+ KTP+E W PA+HH R FGC ++K P++ LD R ++ +GYEPG+ RC R SR
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGA---RCTSSMILRGASSR----
Query: --------------------------------------------------------------------------VARRHLQREHLLAVERCTGGMEDLVG
+A L +H A R +++++G
Subjt: --------------------------------------------------------------------------VARRHLQREHLLAVERCTGGMEDLVG
Query: RGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKAI---GRSYEAQG------------PSGDEGL----------------------RPQKQ
PPG A R+ ++ EL S ++ AEA+++ CW +A+ +S E G P G + + Q+Q
Subjt: RGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWLKAI---GRSYEAQG------------PSGDEGL----------------------RPQKQ
Query: VVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------
+D++EVFAPVARL+ VRLLL A W VH+MDVK AFLN ELKE +YV Q GF+ + KVLRL KAL+
Subjt: VVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH--------------------------
Query: CEH----------RLIVGVYVDDLLITRGDMKVLGD----------------------------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQ
EH RL+VGVYVDDL+IT G+ L S+GAYAKK+L+ AG+ NP++TPME RL+
Subjt: CEH----------RLIVGVYVDDLLITRGDMKVLGD----------------------------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQ
Query: LRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGT--RGWSVKYCVGRGKEKLELVGYNDSDMAGDVVT
L K T+ VD+T+YR IV SLRYLVN+ PDLA+ VGYVSRFME EHL AVKR+LRYVAGT RG S + R K + LVG++DSD+AGDV T
Subjt: LRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGT--RGWSVKYCVGRGKEKLELVGYNDSDMAGDVVT
|
|
| Q7XPB1 OSJNBb0026E15.10 protein | 5.4e-80 | 36.68 | Show/hide |
Query: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
+P RFW EA T V+LLNRSPT+SLD +TP+EAWY + PA+H R FGC ++K+ +P L LD R +V +GYE G++ + + S RV H+
Subjt: MPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGYEPGARCTSSMILRGASSRVARRHLQ
Query: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
R+ + AVE T +D
Subjt: REHLL-----------------------------------------------------------------AVERCTGGMED-------------------
Query: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRSYEAQGPSGDEGL------------R
L+G PPG A R LE+ ELH +S D+ AEAE P W +AIG + + ++G
Subjt: -LVGRGEPPGPAARKLEEKVAELHAISTDKLNIFAEAERKPCWL-------------------------KAIGRSYEAQGPSGDEGL------------R
Query: PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH----------------------
Q+Q VDF+EVFA VARL+ VRLLL + AH W+VH+MDVK AFLN EL E +YV Q GF+ +++ +KV RLHKAL+
Subjt: PQKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH----------------------
Query: ----CEH----------RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPME
EH RL+VGVYVDDL+IT +G+M +V DS G AYA K+L+ AGL D NP +TPME
Subjt: ----CEH----------RLIVGVYVDDLLIT----------RGDM------------------KVLGDSRG------AYAKKLLDTAGLADSNPTRTPME
Query: ARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
RL+LRK VD+T YRS+V SLRYLVNT PDLA+ VGYVSRFME+ RE+HL AV+RILRYVAGTR W +++ G LVGY+DSD+AGD
Subjt: ARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.5e-21 | 28.38 | Show/hide |
Query: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH-------------------CE--
QK +D+EE FAPVAR+ R +L + ++ +VH MDVK AFLN LKE IY+R G + N D V +L+KA++ CE
Subjt: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH-------------------CE--
Query: -----------------HRLIVGVYVDDLLITRGDMKVLGD----------------------------------SRGAYAKKLLDTAGLADSNPTRTPM
+ V +YVDD++I GDM + + S+ AY KK+L + + N TP+
Subjt: -----------------HRLIVGVYVDDLLITRGDMKVLGD----------------------------------SRGAYAKKLLDTAGLADSNPTRTPM
Query: EARL--QLRKADTTMAVDSTNYRSIVRSLRY-LVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAG
+++ +L +D +T RS++ L Y ++ T PDL V +SR+ + E +KR+LRY+ GT + + E +++GY DSD AG
Subjt: EARL--QLRKADTTMAVDSTNYRSIVRSLRY-LVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAG
Query: DVV
+
Subjt: DVV
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-24 | 30.94 | Show/hide |
Query: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH-----------------------
QK+ +DF+E+F+PV ++ +R +L + A EV +DVK AFL+ +L+E IY+ Q GF V +L+K+L+
Subjt: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH-----------------------
Query: ------C--------EHRLIVGVYVDDLLIT----------RG------DMKVLGD--------------------SRGAYAKKLLDTAGLADSNPTRTP
C + +I+ +YVDD+LI +G DMK LG S+ Y +++L+ + ++ P TP
Subjt: ------C--------EHRLIVGVYVDDLLIT----------RG------DMKVLGD--------------------SRGAYAKKLLDTAGLADSNPTRTP
Query: MEARLQLRKADTTMAVDSTN------YRSIVRSLRY-LVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYND
+ L+L K V+ Y S V SL Y +V T PD+A+ VG VSRF+E +EH AVK ILRY+ GT G C+ G L GY D
Subjt: MEARLQLRKADTTMAVDSTN------YRSIVRSLRY-LVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYND
Query: SDMAGDV
+DMAGD+
Subjt: SDMAGDV
|
|
| P25600 Putative transposon Ty5-1 protein YCL074W | 5.5e-13 | 28.79 | Show/hide |
Query: MDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH----------------------CEHR--------------LIVGVYVDDLLITRG----
MDV AFLN + E IYV+Q GF+ NPD V L+ ++ C H + + VYVDDLL+
Subjt: MDVKFAFLNRELKETIYVRQLSGFLGNDNPDKVLRLHKALH----------------------CEHR--------------LIVGVYVDDLLITRG----
Query: ------------DMKVLG------------DSRGAYAKKLLDTAGLADSNP-------TRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNT-YPD
MK LG S G L D A S T+TP+ L + + D T Y+SIV L + NT PD
Subjt: ------------DMKVLG------------DSRGAYAKKLLDTAGLADSNP-------TRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNT-YPD
Query: LAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDS
++Y V +SRF+ R HL + +R+LRY+ TR +KY R +L L Y D+
Subjt: LAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-15 | 34.86 | Show/hide |
Query: VYVDDLLITRGDMKVLGD----------------------------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSI
VYVDD+LIT D +L + S+ Y LL + + P TPM +L T D T YR I
Subjt: VYVDDLLITRGDMKVLGD----------------------------------SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSI
Query: VRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
V SL+YL T PD++Y V +S+FM EEHL A+KRILRY+AGT + G L L Y+D+D AGD
Subjt: VRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMAGD
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-05 | 35.06 | Show/hide |
Query: AEMPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGY
A +PK +W A VYL+NR PT L ++P + + P RVFGCA Y + + LD + + V +GY
Subjt: AEMPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGY
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-13 | 38.21 | Show/hide |
Query: SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVK
S+ Y LL + + P TPM +L T D T YR IV SL+YL T PDL+Y V +S++M ++H A+KR+LRY+AGT +
Subjt: SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVK
Query: YCVGRGKEKLELVGYNDSDMAGD
G L L Y+D+D AGD
Subjt: YCVGRGKEKLELVGYNDSDMAGD
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.1e-04 | 31.17 | Show/hide |
Query: AEMPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGY
A +PK +W A VYL+NR PT L ++P + + + P +VFGCA Y + + L+ + + +GY
Subjt: AEMPKRFWREAEMTVVYLLNRSPTRSLDEKTPHEAWYNKKPAIHHQRVFGCATYMKVARPHLAMLDPRGLKVVSIGY
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.6e-18 | 27.7 | Show/hide |
Query: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDN----PDKVLRLHKAL--------------------
Q++ +DF E F+PV +L V+L+L I+A +++ +H +D+ AFLN +L E IY++ G+ P+ V L K++
Subjt: QKQVVDFEEVFAPVARLKFVRLLLEITAHHSWEVHYMDVKFAFLNRELKETIYVRQLSGFLGNDN----PDKVLRLHKAL--------------------
Query: ------HCEHR----------LIVGVYVDDLLITRGD----------------MKVLGD---------SRGA---------YAKKLLDTAGLADSNPTRT
H +H L V VYVDD++I + ++ LG +R A YA LLD GL P+
Subjt: ------HCEHR----------LIVGVYVDDLLITRGD----------------MKVLGD---------SRGA---------YAKKLLDTAGLADSNPTRT
Query: PMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKY
PM+ + VD+ YR ++ L YL T D+++ V +S+F EA R H AV +IL Y+ GT G + Y
Subjt: PMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKY
|
|
| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 7.4e-05 | 39.71 | Show/hide |
Query: YLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMA
YL T PDL + V +S+F ASR + AV ++L YV GT G + Y L+L + DSD A
Subjt: YLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVKYCVGRGKEKLELVGYNDSDMA
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 9.0e-11 | 34.43 | Show/hide |
Query: SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVK
S+ YA+++L+ AG+ D P TP+ +L T D +++RSIV +L+YL T PD++Y V V + M +KR+LRYV GT +
Subjt: SRGAYAKKLLDTAGLADSNPTRTPMEARLQLRKADTTMAVDSTNYRSIVRSLRYLVNTYPDLAYFVGYVSRFMEASREEHLVAVKRILRYVAGTRGWSVK
Query: YCVGRGKEKLELVGYNDSDMAG
KL + + DSD AG
Subjt: YCVGRGKEKLELVGYNDSDMAG
|
|
