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CmoCh18G005290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G005290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationCmo_Chr18:3902413..3904325
RNA-Seq ExpressionCmoCh18G005290
SyntenyCmoCh18G005290
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573454.1 Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia]6.7e-9397.02Show/hide
Query:  MQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGK
        MQTGPHHAAEEDA REENNKLTIYPRGFNITWGNDERYWRIVNSDE VAELKQVSWLEVTCSTDKVEFGKRY VGFNVSLRPDAFGWKGLDVYVMAKVGK
Subjt:  MQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGK

Query:  KGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
        KGNFFPKKVSLGDDHPE+KFIIPRTPL+ISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
Subjt:  KGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD

KAG7012601.1 Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma]8.5e-10497.31Show/hide
Query:  MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRP
        MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDA REENNKLTIYPRGFNITWGNDERYWRIVNSDE VAELKQVSWLEVTCSTDKVEFGKRY VGFNVSLRP
Subjt:  MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRP

Query:  DAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
        DAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPE+KFIIPRTPL+ISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
Subjt:  DAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD

XP_022142416.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]2.6e-6066.08Show/hide
Query:  TGPHHAAEEDAF-REENNKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAK
        TGPH  A+E A  ++      IYPRGFNITWGND+RYW I NS+ P    VAELKQVSWLEVTCSTD VE GK Y VGFNVS++PDAFGW G++VYVMAK
Subjt:  TGPHHAAEEDAF-REENNKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAK

Query:  VGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV
        VGK G F  KKVSLGD  P +K  IP  PL I++D ST K+ ++IHLGLYEVW+ KWKGGLKIH+AFI+K+
Subjt:  VGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV

XP_022994910.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]8.0e-7881.61Show/hide
Query:  IMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDE----PVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM
        +MQTGPH  AEEDAF +E +K+ IYPRGFNITWGND RYWRIVN +E     +AELKQVSWLEVTCSTD VE GK Y VGFNVSLRPDAFGWKGLDVYVM
Subjt:  IMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDE----PVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM

Query:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
        AKVGK GNFFPKKVSLGDDHP Q FIIP+TPLVI ID STAKE +SIHLGLYEVWSSKWKGGL+IHNAFIEK+D
Subjt:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKVD

XP_023541318.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita pepo subsp. pepo]1.5e-8790.75Show/hide
Query:  IMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM
        +MQTGPHHAAEEDA REENNKL IYPRGFNITWGND+RYWRIVNSDE     VAELKQVSWLEVTCSTDKVEFGKRY VGFNV LRPDAFGWKGLDVYVM
Subjt:  IMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM

Query:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
        AKVGK G FFPKKVSLGDDHP+QKFIIP+TPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGL+IHNAFIEKVD
Subjt:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD

TrEMBL top hitse value%identityAlignment
A0A5A7TIU6 Protein PHLOEM PROTEIN 2-LIKE A9-like3.9e-5463.79Show/hide
Query:  TGPHHAAEEDAFREEN---NKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM
        T PH  A+E A +E+N       +YPRGFNITWGND+RYW I N + P    +AELKQVSWLEVTCSTD VE G+ Y VGFN+++RPDAFGW G+DVYVM
Subjt:  TGPHHAAEEDAFREEN---NKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM

Query:  AKVGKKGNFFPKKVSLGDDHP-EQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV
        AKVGKKG F   KVSLG+  P E    IP+ PL I +  ST KE ++IHLGLYEVWSSKWKGGL+IH+AFI KV
Subjt:  AKVGKKGNFFPKKVSLGDDHP-EQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV

A0A6J1CKW1 protein PHLOEM PROTEIN 2-LIKE A9-like8.4e-5762.43Show/hide
Query:  MQTGPHHAAEEDAFREENNKLT-IYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM
        M  GPH  A++ A  ++    T  YPRG NITWGND+RYW I NS+ P    VAELKQVSWLEVTCSTD VE GK+Y VGFNVS++PDAFGW G++VYVM
Subjt:  MQTGPHHAAEEDAFREENNKLT-IYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM

Query:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV
        AKVGK G F  KKVSLGD    Q   IP  PL I++D ST KE ++IHLGLYEVW+ KWKGGL+IH+AF++ +
Subjt:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV

A0A6J1CM42 protein PHLOEM PROTEIN 2-LIKE A9-like1.3e-6066.08Show/hide
Query:  TGPHHAAEEDAF-REENNKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAK
        TGPH  A+E A  ++      IYPRGFNITWGND+RYW I NS+ P    VAELKQVSWLEVTCSTD VE GK Y VGFNVS++PDAFGW G++VYVMAK
Subjt:  TGPHHAAEEDAF-REENNKLTIYPRGFNITWGNDERYWRIVNSDEP----VAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAK

Query:  VGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV
        VGK G F  KKVSLGD  P +K  IP  PL I++D ST K+ ++IHLGLYEVW+ KWKGGLKIH+AFI+K+
Subjt:  VGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKV

A0A6J1GT21 protein PHLOEM PROTEIN 2-LIKE A9-like isoform X26.2e-6058.74Show/hide
Query:  MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSD-EPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLR
        MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNK+ IYPRGF ITWGNDERYW+ +  + +  AELKQVSWLEV CST KVE GK Y VGF VSL+
Subjt:  MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSD-EPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLR

Query:  PDAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPEQKFIIP---RTPLVISI--------------------DRS-----------TAKEKS--IHLGL
        PDAFGWK +DVYVMAKVGK G +  KK  L +     K  IP     PL I                      D+S           T K++S  IH GL
Subjt:  PDAFGWKGLDVYVMAKVGKKGNFFPKKVSLGDDHPEQKFIIP---RTPLVISI--------------------DRS-----------TAKEKS--IHLGL

Query:  YEVWSSKWKGGLKIHNAFIEKVD
        YEVW+ KWKGGL I +AFIE+ +
Subjt:  YEVWSSKWKGGLKIHNAFIEKVD

A0A6J1K2M8 protein PHLOEM PROTEIN 2-LIKE A9-like3.9e-7881.61Show/hide
Query:  IMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDE----PVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM
        +MQTGPH  AEEDAF +E +K+ IYPRGFNITWGND RYWRIVN +E     +AELKQVSWLEVTCSTD VE GK Y VGFNVSLRPDAFGWKGLDVYVM
Subjt:  IMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDE----PVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVM

Query:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKVD
        AKVGK GNFFPKKVSLGDDHP Q FIIP+TPLVI ID STAKE +SIHLGLYEVWSSKWKGGL+IHNAFIEK+D
Subjt:  AKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKE-KSIHLGLYEVWSSKWKGGLKIHNAFIEKVD

SwissProt top hitse value%identityAlignment
Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A91.7e-3038.8Show/hide
Query:  QTGPHHAAEEDAFREENNKLTI-YPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGK
        Q   HH A+    ++ N K  I  P G N  WG D RYW I       AELK VSWLEVT S DK+E GK Y +GF +S +PDA GW    V++ AK+GK
Subjt:  QTGPHHAAEEDAFREENNKLTI-YPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGK

Query:  KGNFFPKKV-----SLG-----------DDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKV
        KG    K++     + G            D  +  F I  +P  ++      ++  +  GLYEVW+ +WK GL IH AF+++V
Subjt:  KGNFFPKKV-----SLG-----------DDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKV

Arabidopsis top hitse value%identityAlignment
AT1G10155.1 phloem protein 2-A101.6e-3140.8Show/hide
Query:  HHAAEEDAFREENNKLTIY-PRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGKKGNF
        H+ AE +  ++   K  ++ P G N  WG D RYW I N D   AELK+VSWLEVT S DK+E GK Y +GF +S   DA GW    V++ AK+GKKG  
Subjt:  HHAAEEDAFREENNKLTIY-PRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGKKGNF

Query:  FPKKV-SLGDDHPEQK-----FIIP-----RTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKV
          K++ S+ ++  + K       IP     R  + +S   +  ++  +  GLYEVW+ KWK GL I+ AF+E+V
Subjt:  FPKKV-SLGDDHPEQK-----FIIP-----RTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKV

AT1G31200.1 phloem protein 2-A91.2e-3138.8Show/hide
Query:  QTGPHHAAEEDAFREENNKLTI-YPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGK
        Q   HH A+    ++ N K  I  P G N  WG D RYW I       AELK VSWLEVT S DK+E GK Y +GF +S +PDA GW    V++ AK+GK
Subjt:  QTGPHHAAEEDAFREENNKLTI-YPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDVYVMAKVGK

Query:  KGNFFPKKV-----SLG-----------DDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKV
        KG    K++     + G            D  +  F I  +P  ++      ++  +  GLYEVW+ +WK GL IH AF+++V
Subjt:  KGNFFPKKV-----SLG-----------DDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTTGTTCATCATTTTTCATTCAAGTTCTTGATTTTTCTTGTCCAATAATGCAAACTGGGCCTCACCACGCAGCAGAAGAAGATGCCTTTCGCGAGGAAAATAA
CAAGCTCACAATTTATCCGAGAGGTTTTAATATCACATGGGGCAATGATGAGCGTTATTGGCGTATTGTCAACTCCGACGAGCCGGTGGCCGAGCTGAAGCAAGTTTCAT
GGCTTGAAGTGACATGCTCAACTGATAAAGTAGAGTTTGGAAAGAGGTACAATGTGGGTTTCAATGTTTCACTAAGGCCAGATGCATTTGGATGGAAGGGGCTTGATGTT
TATGTAATGGCTAAGGTTGGGAAGAAAGGAAACTTCTTCCCTAAGAAAGTGTCTCTTGGAGACGACCACCCAGAGCAAAAGTTTATCATTCCTAGGACGCCTTTAGTAAT
CTCAATTGATCGTTCAACAGCCAAAGAGAAAAGCATCCACCTTGGGTTGTATGAAGTTTGGAGTTCAAAGTGGAAGGGGGGATTGAAGATCCACAATGCATTCATTGAGA
AGGTTGACTAA
mRNA sequenceShow/hide mRNA sequence
CTACTAACACCCTTTCTTCTTCATTCTATAAATAATTCATTTCAATGTCTCTTTGTTCATCATTTTTCATTCAAGTTCTTGATTTTTCTTGTCCAATAATGCAAACTGGG
CCTCACCACGCAGCAGAAGAAGATGCCTTTCGCGAGGAAAATAACAAGCTCACAATTTATCCGAGAGGTTTTAATATCACATGGGGCAATGATGAGCGTTATTGGCGTAT
TGTCAACTCCGACGAGCCGGTGGCCGAGCTGAAGCAAGTTTCATGGCTTGAAGTGACATGCTCAACTGATAAAGTAGAGTTTGGAAAGAGGTACAATGTGGGTTTCAATG
TTTCACTAAGGCCAGATGCATTTGGATGGAAGGGGCTTGATGTTTATGTAATGGCTAAGGTTGGGAAGAAAGGAAACTTCTTCCCTAAGAAAGTGTCTCTTGGAGACGAC
CACCCAGAGCAAAAGTTTATCATTCCTAGGACGCCTTTAGTAATCTCAATTGATCGTTCAACAGCCAAAGAGAAAAGCATCCACCTTGGGTTGTATGAAGTTTGGAGTTC
AAAGTGGAAGGGGGGATTGAAGATCCACAATGCATTCATTGAGAAGGTTGACTAAACTTTGAGCCATAATCCTATGAGGGATATGAGATTTCCTTTGTTTTTTAAGCTTT
CAAAATGTTATGATGTTTGTAAAAGTAAAAGGATGTCTTTGATGTTGTTGATTCATTGATATGTTAAAGTCTCGTTTTGTTGCTTAATTGAATGCTATTTATTATTATAT
TGCTTAATCTATAGCCAAAAACTCCAAACGGGCTTTAGGAAGGACAAGGATTGTTTAGTTCAAGATTTTGTTTCAGATGTTACAAATAAGATGACTTATGATGTCTAGAA
ATTAGGGGTGTTTATAGATTGGGTTAGGTCGGATAGGAAAG
Protein sequenceShow/hide protein sequence
MSLCSSFFIQVLDFSCPIMQTGPHHAAEEDAFREENNKLTIYPRGFNITWGNDERYWRIVNSDEPVAELKQVSWLEVTCSTDKVEFGKRYNVGFNVSLRPDAFGWKGLDV
YVMAKVGKKGNFFPKKVSLGDDHPEQKFIIPRTPLVISIDRSTAKEKSIHLGLYEVWSSKWKGGLKIHNAFIEKVD