; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G005540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G005540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGag/pol protein
Genome locationCmo_Chr18:4392237..4395289
RNA-Seq ExpressionCmoCh18G005540
SyntenyCmoCh18G005540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035260.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-12055.32Show/hide
Query:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG
        M +SIVQLLASEKLNGDNY  WKSNLNTILV+DDL+ VLT+ECP  P+SNANRT R AYDRW+KA++KA VYILA+++DVLAKKH  +  AK I+++LK 
Subjt:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG

Query:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTREGYAVE
        MFG+P +SLRHEAIKYIY  RMK+ TSVREHV LDMM+HFN+ E N   IDE +Q                   E +SW+ L++GEITL+VGT E  + +
Subjt:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTREGYAVE

Query:  TARYI--------------------------------------------------------LNMVPTKSVSETPYELWKGRKG---YPKETKGGLFYDPQ
            +                                                        +N+     VSETPYELWKGRKG   YPKE++GGLFYDPQ
Subjt:  TARYI--------------------------------------------------------LNMVPTKSVSETPYELWKGRKG---YPKETKGGLFYDPQ

Query:  ENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGI
        EN+VFVSTNATFLEEDH ++HQPR+KLVL+EISK A+DK        S S +VVD    S Q HPSQELR PR S R++ QP+RYLGL+E+ V+IP+DGI
Subjt:  ENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGI

Query:  EDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN
        EDPLTYKQAMND D DQWIKAMNLE+ESM+FN
Subjt:  EDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN

KAA0035987.1 gag/pol protein [Cucumis melo var. makuwa]9.0e-11750.2Show/hide
Query:  IRRVVTWESKQRKLHKWIGFLS--MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILAS
        IRRV  W      ++K  G  S  M   IVQLLASEKLNGDNY  WK  LNTILV+DDL+FVLTEECP  P+SNANRT R  YDRWIKA++KA VYILAS
Subjt:  IRRVVTWESKQRKLHKWIGFLS--MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILAS

Query:  ISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVET
        +SDVLAKKH+ +   K+I++SLKGMFGQ  +S+RHE IKYIY  RMKE TS+REHV LDMM+H N+AE N   IDE +Q                   E 
Subjt:  ISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVET

Query:  SSWRMLADGEITLRVGTRE---------------------------------------------------------------------------------
        SSW+ L++GE+TL+VGT E                                                                                 
Subjt:  SSWRMLADGEITLRVGTRE---------------------------------------------------------------------------------

Query:  ------------------------GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLS
                                GYA+ET  YILN VP+KSVSETPYEL KGRKGYPKE+KGGLFYDPQEN+VFVS NATFL+EDH RNHQ  SKLVL 
Subjt:  ------------------------GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLS

Query:  EISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMY
        EISK          D+ S S +VVD      Q H SQEL  PRRSGR++ QPDRYLGL+E Q++IPD+GI+DPLTYKQ MND D DQW+KAM+LE+ESMY
Subjt:  EISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMY

Query:  FN
         N
Subjt:  FN

KAA0054281.1 gag/pol protein [Cucumis melo var. makuwa]5.6e-13569.13Show/hide
Query:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG
        M +SIVQLLA EKLNGDNY  WKSNLNT L++DDL+FVLTEECP  P+SNANRT R AYDRWIKAN+KA VYI AS+SDVLAK+H+ +   KEIM+SLKG
Subjt:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG

Query:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE-----
        MFGQP +SLRHEAIKYIY  RMKE TSVREHV LDMM+HFN+AE N   IDE   VS I   LPK         E SSW+ L+ GEITL+VGT E     
Subjt:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE-----

Query:  -GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRV
         GYA+E A YILN V +KSVS+TPYELWKGRKGYPKE+KGGLFYD QEN+VFVSTNATFLEEDH RNHQ RSKLVL EISK          D+ S S ++
Subjt:  -GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRV

Query:  VDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN
        VD      Q HPSQEL  PRRSGR+  Q DRYL L+E Q+IIPDDGIEDPLTYKQAMND D DQWIKAM+LEMESMY N
Subjt:  VDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-11348.43Show/hide
Query:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG
        MT++ + +LA++KLNG+NY  WK+ +NT+L+IDDL+FVL EECP  P++NA +TVR+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M  A+EIM+SL+ 
Subjt:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG

Query:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNV--------------ETSSWRML----
        MFGQ S+ ++H+A+KYIYN RM EG SVREHV L++MVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N               E  ++  L    
Subjt:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNV--------------ETSSWRML----

Query:  -ADGEITLRVGTRE-------------------------------------------------------------------------------------G
           GE  +   TR+                                                                                     G
Subjt:  -ADGEITLRVGTRE-------------------------------------------------------------------------------------G

Query:  YAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVD
        YAV+TA YILN VP+KSVSETP +LW G KGYPK T+GG FYDP++N+VFVSTNATFLEEDH R H+PRSK+VL+E+SKE    +TRVV++ S   RVV 
Subjt:  YAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVD

Query:  GADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN
           +S + H  Q LR PR+SGR+   P RY+ L ET  +I D  IEDPLT+K+AM D D+D+WIKAMNLE+ESMYFN
Subjt:  GADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN

TYK14977.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-11767.64Show/hide
Query:  VIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRE
        ++DDL+FVLTEECP   +SNANRT R AYDRWIKAN+KA VYI AS+SDVLAK+H+ +   KEIM+SLKGMFGQP +SLRHEAIKYIY  RMKE TSVRE
Subjt:  VIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRE

Query:  HVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE------GYAVETARYILNMVPTKSVSETPYELWKG
        HV LDMM+HFN+AE N   IDE   VS I   LPK         E SSW+ L+ GEITL+VGT E      GYA+E A YILN V +KSVS+TPYELWKG
Subjt:  HVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE------GYAVETARYILNMVPTKSVSETPYELWKG

Query:  RKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPD
        RKGYPKE+KGGLFYD QEN+VFVSTNATFLEEDH RNHQ RSKLVL EISK          D+ S S ++VD      Q HPSQEL  PRRSGR+  Q D
Subjt:  RKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPD

Query:  RYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEM
        RYL L+E Q+IIPDDGIEDPLTYKQAMND D DQWIKAM+LEM
Subjt:  RYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEM

TrEMBL top hitse value%identityAlignment
A0A5A7UL66 Gag/pol protein2.7e-13569.13Show/hide
Query:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG
        M +SIVQLLA EKLNGDNY  WKSNLNT L++DDL+FVLTEECP  P+SNANRT R AYDRWIKAN+KA VYI AS+SDVLAK+H+ +   KEIM+SLKG
Subjt:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG

Query:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE-----
        MFGQP +SLRHEAIKYIY  RMKE TSVREHV LDMM+HFN+AE N   IDE   VS I   LPK         E SSW+ L+ GEITL+VGT E     
Subjt:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE-----

Query:  -GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRV
         GYA+E A YILN V +KSVS+TPYELWKGRKGYPKE+KGGLFYD QEN+VFVSTNATFLEEDH RNHQ RSKLVL EISK          D+ S S ++
Subjt:  -GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRV

Query:  VDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN
        VD      Q HPSQEL  PRRSGR+  Q DRYL L+E Q+IIPDDGIEDPLTYKQAMND D DQWIKAM+LEMESMY N
Subjt:  VDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN

A0A5A7V6N0 Gag/pol protein1.0e-11348.43Show/hide
Query:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG
        MT++ + +LA++KLNG+NY  WK+ +NT+L+IDDL+FVL EECP  P++NA +TVR+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M  A+EIM+SL+ 
Subjt:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG

Query:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNV--------------ETSSWRML----
        MFGQ S+ ++H+A+KYIYN RM EG SVREHV L++MVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N               E  ++  L    
Subjt:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNV--------------ETSSWRML----

Query:  -ADGEITLRVGTRE-------------------------------------------------------------------------------------G
           GE  +   TR+                                                                                     G
Subjt:  -ADGEITLRVGTRE-------------------------------------------------------------------------------------G

Query:  YAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVD
        YAV+TA YILN VP+KSVSETP +LW G KGYPK T+GG FYDP++N+VFVSTNATFLEEDH R H+PRSK+VL+E+SKE    +TRVV++ S   RVV 
Subjt:  YAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVD

Query:  GADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN
           +S + H  Q LR PR+SGR+   P RY+ L ET  +I D  IEDPLT+K+AM D D+D+WIKAMNLE+ESMYFN
Subjt:  GADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN

A0A5D3C7X2 Gag/pol protein3.2e-12055.32Show/hide
Query:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG
        M +SIVQLLASEKLNGDNY  WKSNLNTILV+DDL+ VLT+ECP  P+SNANRT R AYDRW+KA++KA VYILA+++DVLAKKH  +  AK I+++LK 
Subjt:  MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKG

Query:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTREGYAVE
        MFG+P +SLRHEAIKYIY  RMK+ TSVREHV LDMM+HFN+ E N   IDE +Q                   E +SW+ L++GEITL+VGT E  + +
Subjt:  MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTREGYAVE

Query:  TARYI--------------------------------------------------------LNMVPTKSVSETPYELWKGRKG---YPKETKGGLFYDPQ
            +                                                        +N+     VSETPYELWKGRKG   YPKE++GGLFYDPQ
Subjt:  TARYI--------------------------------------------------------LNMVPTKSVSETPYELWKGRKG---YPKETKGGLFYDPQ

Query:  ENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGI
        EN+VFVSTNATFLEEDH ++HQPR+KLVL+EISK A+DK        S S +VVD    S Q HPSQELR PR S R++ QP+RYLGL+E+ V+IP+DGI
Subjt:  ENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGI

Query:  EDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN
        EDPLTYKQAMND D DQWIKAMNLE+ESM+FN
Subjt:  EDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN

A0A5D3CSR6 Gag/pol protein1.9e-11767.64Show/hide
Query:  VIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRE
        ++DDL+FVLTEECP   +SNANRT R AYDRWIKAN+KA VYI AS+SDVLAK+H+ +   KEIM+SLKGMFGQP +SLRHEAIKYIY  RMKE TSVRE
Subjt:  VIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRE

Query:  HVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE------GYAVETARYILNMVPTKSVSETPYELWKG
        HV LDMM+HFN+AE N   IDE   VS I   LPK         E SSW+ L+ GEITL+VGT E      GYA+E A YILN V +KSVS+TPYELWKG
Subjt:  HVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVETSSWRMLADGEITLRVGTRE------GYAVETARYILNMVPTKSVSETPYELWKG

Query:  RKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPD
        RKGYPKE+KGGLFYD QEN+VFVSTNATFLEEDH RNHQ RSKLVL EISK          D+ S S ++VD      Q HPSQEL  PRRSGR+  Q D
Subjt:  RKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPD

Query:  RYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEM
        RYL L+E Q+IIPDDGIEDPLTYKQAMND D DQWIKAM+LEM
Subjt:  RYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEM

A0A5D3E3F1 Gag/pol protein4.3e-11750.2Show/hide
Query:  IRRVVTWESKQRKLHKWIGFLS--MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILAS
        IRRV  W      ++K  G  S  M   IVQLLASEKLNGDNY  WK  LNTILV+DDL+FVLTEECP  P+SNANRT R  YDRWIKA++KA VYILAS
Subjt:  IRRVVTWESKQRKLHKWIGFLS--MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAYDRWIKANDKARVYILAS

Query:  ISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVET
        +SDVLAKKH+ +   K+I++SLKGMFGQ  +S+RHE IKYIY  RMKE TS+REHV LDMM+H N+AE N   IDE +Q                   E 
Subjt:  ISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVET

Query:  SSWRMLADGEITLRVGTRE---------------------------------------------------------------------------------
        SSW+ L++GE+TL+VGT E                                                                                 
Subjt:  SSWRMLADGEITLRVGTRE---------------------------------------------------------------------------------

Query:  ------------------------GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLS
                                GYA+ET  YILN VP+KSVSETPYEL KGRKGYPKE+KGGLFYDPQEN+VFVS NATFL+EDH RNHQ  SKLVL 
Subjt:  ------------------------GYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLS

Query:  EISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMY
        EISK          D+ S S +VVD      Q H SQEL  PRRSGR++ QPDRYLGL+E Q++IPD+GI+DPLTYKQ MND D DQW+KAM+LE+ESMY
Subjt:  EISKEAIDKTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMY

Query:  FN
         N
Subjt:  FN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAATACGTCCTATGGCTCCACCACTAGGTTGCACTATGAGGTTCCCATGTTCCACCTGCATGTTGCCCTAGAGCAACTACCCATTCGGAGGGTCGTAACATGGGA
GTCGAAACAACGCAAACTCCATAAATGGATAGGATTTCTTAGCATGACAAACTCAATAGTACAATTACTCGCTTCTGAGAAATTAAACGGCGACAACTACACAACTTGGA
AATCAAACCTAAACACAATACTGGTCATTGATGATTTAAAGTTTGTTTTAACTGAGGAGTGTCCTCCAAACCCCAGCTCAAATGCAAATCGAACAGTTCGGGATGCGTAT
GACAGATGGATAAAGGCAAATGATAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGGGTATTGCTAAAGAGATTATGGA
ATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGCCGTATGAAAGAAGGGACCTCAGTTAGAGAACATGTCN
TCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCAAAGAGCTTCTTCCAG
TTCCGCACCAATGTGGAAACTAGCTCCTGGAGAATGCTTGCGGACGGCGAGATAACACTCAGGGTTGGAACAAGAGAGGGATATGCAGTGGAGACTGCTAGATACATTTT
GAATATGGTTCCTACTAAGAGTGTTTCAGAAACACCTTATGAGTTATGGAAAGGGCGTAAAGGATACCCCAAAGAGACGAAAGGTGGTTTGTTTTATGACCCTCAAGAAA
ATAGAGTGTTTGTATCAACAAACGCTACATTCTTAGAGGAAGACCACGAAAGAAATCATCAACCTCGTAGCAAACTAGTATTAAGTGAGATTTCTAAAGAAGCTATTGAT
AAAACAACAAGAGTTGTTGATCAAGCTAGTCCTTCAATAAGAGTTGTTGATGGAGCTGACACTTCTGATCAATTACATCCTTCTCAAGAGTTGAGAATGCCTCGACGTAG
TGGGAGGATTATAACTCAACCCGATCGTTACTTGGGTTTGGCAGAAACTCAAGTCATCATACCTGATGATGGCATTGAGGATCCATTGACCTATAAACAGGCAATGAATG
ATGAAGATAGAGATCAGTGGATTAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAATACGTCCTATGGCTCCACCACTAGGTTGCACTATGAGGTTCCCATGTTCCACCTGCATGTTGCCCTAGAGCAACTACCCATTCGGAGGGTCGTAACATGGGA
GTCGAAACAACGCAAACTCCATAAATGGATAGGATTTCTTAGCATGACAAACTCAATAGTACAATTACTCGCTTCTGAGAAATTAAACGGCGACAACTACACAACTTGGA
AATCAAACCTAAACACAATACTGGTCATTGATGATTTAAAGTTTGTTTTAACTGAGGAGTGTCCTCCAAACCCCAGCTCAAATGCAAATCGAACAGTTCGGGATGCGTAT
GACAGATGGATAAAGGCAAATGATAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGGGTATTGCTAAAGAGATTATGGA
ATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGCCGTATGAAAGAAGGGACCTCAGTTAGAGAACATGTCN
TCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCAAAGAGCTTCTTCCAG
TTCCGCACCAATGTGGAAACTAGCTCCTGGAGAATGCTTGCGGACGGCGAGATAACACTCAGGGTTGGAACAAGAGAGGGATATGCAGTGGAGACTGCTAGATACATTTT
GAATATGGTTCCTACTAAGAGTGTTTCAGAAACACCTTATGAGTTATGGAAAGGGCGTAAAGGATACCCCAAAGAGACGAAAGGTGGTTTGTTTTATGACCCTCAAGAAA
ATAGAGTGTTTGTATCAACAAACGCTACATTCTTAGAGGAAGACCACGAAAGAAATCATCAACCTCGTAGCAAACTAGTATTAAGTGAGATTTCTAAAGAAGCTATTGAT
AAAACAACAAGAGTTGTTGATCAAGCTAGTCCTTCAATAAGAGTTGTTGATGGAGCTGACACTTCTGATCAATTACATCCTTCTCAAGAGTTGAGAATGCCTCGACGTAG
TGGGAGGATTATAACTCAACCCGATCGTTACTTGGGTTTGGCAGAAACTCAAGTCATCATACCTGATGATGGCATTGAGGATCCATTGACCTATAAACAGGCAATGAATG
ATGAAGATAGAGATCAGTGGATTAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTAA
Protein sequenceShow/hide protein sequence
MSNTSYGSTTRLHYEVPMFHLHVALEQLPIRRVVTWESKQRKLHKWIGFLSMTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNPSSNANRTVRDAY
DRWIKANDKARVYILASISDVLAKKHDVMGIAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVXLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQ
FRTNVETSSWRMLADGEITLRVGTREGYAVETARYILNMVPTKSVSETPYELWKGRKGYPKETKGGLFYDPQENRVFVSTNATFLEEDHERNHQPRSKLVLSEISKEAID
KTTRVVDQASPSIRVVDGADTSDQLHPSQELRMPRRSGRIITQPDRYLGLAETQVIIPDDGIEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFN