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CmoCh18G005700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G005700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transcription factor Y subunit gamma
Genome locationCmo_Chr18:4736528..4738493
RNA-Seq ExpressionCmoCh18G005700
SyntenyCmoCh18G005700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573498.1 hypothetical protein SDJN03_27385, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3497.56Show/hide
Query:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        +E NKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
Subjt:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
XP_022142680.1 uncharacterized protein LOC111012736 [Momordica charantia]8.0e-2785.19Show/hide
Query:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        E NKS DVEP   +A+AKGEL DEKPDINDVPM+ESQDNDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKR+G
Subjt:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
XP_022925360.1 uncharacterized protein LOC111432647 [Cucurbita moschata]1.4e-3497.56Show/hide
Query:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        +E NKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
Subjt:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
XP_022994887.1 uncharacterized protein LOC111490478 [Cucurbita maxima]4.4e-3395.06Show/hide
Query:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK
        +E NKSNDVEPGSAVASAKG+LQDEKP+INDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK
Subjt:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK
XP_023521102.1 uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo]1.4e-3497.56Show/hide
Query:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        +E NKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
Subjt:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
TrEMBL top hitse value%identityAlignment
A0A5A7UEU0 Nuclear transcription factor Y subunit gamma2.5e-2685.19Show/hide
Query:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        E  KSNDVEP S VA+ KGELQDEKPDINDVPM+ESQDNDH VRQDLNESTLDLSLNLNAL+D GE  SKADHIRDGKRKG
Subjt:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
A0A5D3CMI7 Putative serine/threonine-protein kinase2.5e-2685.19Show/hide
Query:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        E  KSNDVEP S VA+ KGELQDEKPDINDVPM+ESQDNDH VRQDLNESTLDLSLNLNAL+D GE  SKADHIRDGKRKG
Subjt:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
A0A6J1CLM1 uncharacterized protein LOC1110127363.9e-2785.19Show/hide
Query:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        E NKS DVEP   +A+AKGEL DEKPDINDVPM+ESQDNDH VRQDLNESTLDLSLNLNALNDDGE GSKADHIRDGKR+G
Subjt:  ETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
A0A6J1EHR2 uncharacterized protein LOC1114326476.6e-3597.56Show/hide
Query:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
        +E NKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
Subjt:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG
A0A6J1JX59 uncharacterized protein LOC1114904782.1e-3395.06Show/hide
Query:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK
        +E NKSNDVEPGSAVASAKG+LQDEKP+INDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK
Subjt:  FETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G22320.1 unknown protein6.1e-0941.11Show/hide
Query:  LPDEYKIFETNKSNDVEPGSAVASAKGELQ-DEKPDINDVPMDESQ---------DNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKAD
        + ++ K+ + +K ++ +     +  K E++ +EKPDINDVPM++ Q         D + VVRQDLNEST+DL LNLNA + D E   K D
Subjt:  LPDEYKIFETNKSNDVEPGSAVASAKGELQ-DEKPDINDVPMDESQ---------DNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKAD
AT4G22320.2 unknown protein4.7e-0941.57Show/hide
Query:  LPDEYKIFETNKSNDVEPGSAVASAKGELQ-DEKPDINDVPMDESQ--------DNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKAD
        + ++ K+ + +K ++ +     +  K E++ +EKPDINDVPM++ Q        D + VVRQDLNEST+DL LNLNA + D E   K D
Subjt:  LPDEYKIFETNKSNDVEPGSAVASAKGELQ-DEKPDINDVPMDESQ--------DNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKAD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATCTTAAAAAGGGAAAAGTGGGTTGGAAAGTGACAGGACTGCCTGATGAATACAAAATTTTTGAAACTAACAAATCAAATGATGTTGAACCAGGAAGTGCAGT
GGCGAGTGCCAAGGGCGAGCTTCAAGACGAGAAACCAGATATTAACGATGTACCAATGGACGAAAGTCAGGACAACGACCATGTAGTGCGCCAAGATTTGAACGAAAGTA
CTTTGGATTTAAGTCTGAACTTGAATGCTCTCAATGACGATGGCGAAGCTGGTTCGAAAGCTGATCACATTAGAGATGGCAAGAGGAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
TTAGCGACCCTATGAAGGATCTTAAAAAGGGAAAAGTGGGTTGGAAAGTGACAGGACTGCCTGATGAATACAAAATTTTTGAAACTAACAAATCAAATGATGTTGAACCA
GGAAGTGCAGTGGCGAGTGCCAAGGGCGAGCTTCAAGACGAGAAACCAGATATTAACGATGTACCAATGGACGAAAGTCAGGACAACGACCATGTAGTGCGCCAAGATTT
GAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAATGACGATGGCGAAGCTGGTTCGAAAGCTGATCACATTAGAGATGGCAAGAGGAAGGGCTAACTTT
TAGAAGCAGCTGCAGTTTCGTGCTTACAAATTCAATTCTCTTGTTGGAACTGAGTTACTTGACATCCCACATCTCTGCTAATCCTGGAAGTATATGGTTCTTCAATACTA
GTATGATATGATTGCTTATTTGAGCTAATTTTGATTTGTTCACAGAAAAAGATAAACAGTACCATATTTTATCTTTGAAATTCGATATTGATGTTAGAAGCTGTATCGAG
AGTCGAGGGAATTGTGTACGATTATCCACTGAGGATTTAGCTTTATTTGGTTTCTGTCAAATGATTATCTAATGGACCCTAAGAGTTAAGAAAGCCTTACTATTTCAATC
AAACATTT
Protein sequenceShow/hide protein sequence
MKDLKKGKVGWKVTGLPDEYKIFETNKSNDVEPGSAVASAKGELQDEKPDINDVPMDESQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG