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CmoCh18G005780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G005780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:5467806..5468111
RNA-Seq ExpressionCmoCh18G005780
SyntenyCmoCh18G005780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042344.1 hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa]4.9e-1360.49Show/hide
Query:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQS
        +V SA+E GNDPLL                 +VVPCLKELENLL   K  YS GG A++VKIVVTREQFKLLLANAKK+QS
Subjt:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQS

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1260.98Show/hide
Query:  VDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVH
        VDSATE  ND LL                 DVVPCLKELE LLV  K  YS G  AR+VKIVVT+EQFKLLLANAKK+QS H
Subjt:  VDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVH

KGN64995.1 hypothetical protein Csa_022837 [Cucumis sativus]1.6e-1955.86Show/hide
Query:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRP
        +V SATE GNDPLL                 +VVPCLKELENLL  LK  YS    A++VKIVVT+EQFKLLL+NAKK+Q  H      GPR+G + WRP
Subjt:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRP

Query:  TLSVILEEEEF
        TLS I EEE+F
Subjt:  TLSVILEEEEF

XP_023542404.1 uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo]8.6e-3487.1Show/hide
Query:  MVDSATEQGNDPLLDVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRPTLSVILEEEE
        +VDSATEQGNDPLLDVVPCLKELENLLVYLKTAYSSGG AREVKIVVTREQFKLLLANAKKMQS +     RGP RGRRKWRP LSVI EEEE
Subjt:  MVDSATEQGNDPLLDVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRPTLSVILEEEE

XP_038877793.1 uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida]3.4e-2260.55Show/hide
Query:  DSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRPTL
        DSATE G DPLL                 ++VPCLKELENLL   K AYS G  AR+VKIVVT+EQFKLLLANAKK+QS H      GPR+G RKWRPTL
Subjt:  DSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRPTL

Query:  SVILEEEEF
        S I EEE+F
Subjt:  SVILEEEEF

TrEMBL top hitse value%identityAlignment
A0A0A0LSY9 Uncharacterized protein7.6e-2055.86Show/hide
Query:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRP
        +V SATE GNDPLL                 +VVPCLKELENLL  LK  YS    A++VKIVVT+EQFKLLL+NAKK+Q  H      GPR+G + WRP
Subjt:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHD----RGPRRGRRKWRP

Query:  TLSVILEEEEF
        TLS I EEE+F
Subjt:  TLSVILEEEEF

A0A5D3CW41 Uncharacterized protein2.4e-1360.49Show/hide
Query:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQS
        +V SA+E GNDPLL                 +VVPCLKELENLL   K  YS GG A++VKIVVTREQFKLLLANAKK+QS
Subjt:  MVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGATTCCGCAACTGAACAAGGTAACGACCCTCTTCTCGATGTTGTTCCATGCCTGAAAGAGCTTGAAAATCTTCTGGTTTACTTGAAGACAGCGTACTCGAGTGG
AGGAAGAGCAAGGGAGGTGAAAATTGTTGTTACTAGGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGATGCAATCTGTACATGATAGAGGACCCCGTAGAGGGC
GTCGAAAATGGCGGCCGACGCTGTCTGTAATCTTGGAGGAAGAAGAGTTTAGAACGAGGTCCGGGAAGGAAACTTGTGTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGATTCCGCAACTGAACAAGGTAACGACCCTCTTCTCGATGTTGTTCCATGCCTGAAAGAGCTTGAAAATCTTCTGGTTTACTTGAAGACAGCGTACTCGAGTGG
AGGAAGAGCAAGGGAGGTGAAAATTGTTGTTACTAGGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGATGCAATCTGTACATGATAGAGGACCCCGTAGAGGGC
GTCGAAAATGGCGGCCGACGCTGTCTGTAATCTTGGAGGAAGAAGAGTTTAGAACGAGGTCCGGGAAGGAAACTTGTGTAGCTTAG
Protein sequenceShow/hide protein sequence
MVDSATEQGNDPLLDVVPCLKELENLLVYLKTAYSSGGRAREVKIVVTREQFKLLLANAKKMQSVHDRGPRRGRRKWRPTLSVILEEEEFRTRSGKETCVA