; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G005870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G005870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytosolic Fe-S cluster assembly factor NAR1 homolog
Genome locationCmo_Chr18:5509791..5510944
RNA-Seq ExpressionCmoCh18G005870
SyntenyCmoCh18G005870
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR004108 - Iron hydrogenase, large subunit, C-terminal
IPR009016 - Iron hydrogenase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573528.1 Protein NAR1, partial [Cucurbita argyrosperma subsp. sororia]5.3e-6998.6Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN+DNGKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

KAG7012644.1 Protein NAR1 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-6998.6Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN+DNGKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

XP_022925333.1 LOW QUALITY PROTEIN: protein NAR1-like [Cucurbita moschata]6.2e-70100Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

XP_023542134.1 protein NAR1-like isoform X1 [Cucurbita pepo subsp. pepo]4.9e-6796.5Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRI DLNDFIAPSQACVVSLKGLKATTTK D+VEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN+DNGKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

XP_023542137.1 protein NAR1-like isoform X2 [Cucurbita pepo subsp. pepo]4.9e-6796.5Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRI DLNDFIAPSQACVVSLKGLKATTTK D+VEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN+DNGKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

TrEMBL top hitse value%identityAlignment
A0A0A0LVS1 Fe_hyd_SSU domain-containing protein1.3e-6593.01Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQAC+VSLKGLKAT TKPD+VEVSAS+ QLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN++ GKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTF KSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

A0A5A7SYM1 Cytosolic Fe-S cluster assembly factor narfl4.5e-6693.71Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQAC+VSLKGLKATTTKPD+VEVSAS+ QLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN++ GKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTF KSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

A0A6J1CNT4 protein NAR13.8e-6592.31Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQAC+VSLKGLKATTTKPD+VEVSAS+KQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEF+SN++  KVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTF KS+GVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

A0A6J1EEW4 LOW QUALITY PROTEIN: protein NAR1-like3.0e-70100Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

A0A6J1KFK6 protein NAR1-like2.2e-6591.61Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFSATLRIGDLND+IAPSQAC+VSLKGLKAT+TKPD+VEVSAS+KQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSN++ GKVV+VSLS
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVHFGISPLKVF+KLTTF KSMGVKAIFD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

SwissProt top hitse value%identityAlignment
A4FV58 Cytosolic iron-sulfur assembly component 36.3e-2543.4Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLK-------GLKATTTKPD--RVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNM--
        M+  FS  L++ DL+DFIAPSQ C+  +K       G+     + D    +VS      K E  KISL DCLACSGCVTSAETV++ +QS +E    +  
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLK-------GLKATTTKPD--RVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNM--

Query:  ------DNGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRD
              D  K+V++S+SPQSRASLAV F ++P    +KLT F K +G   +FD + SR+
Subjt:  ------DNGKVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRD

Q54F30 Probable cytosolic Fe-S cluster assembly factor narfl3.7e-2541.51Show/hide
Query:  EKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDR---------VEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNG-
        +KFS+ L++ +  D+I PSQ C+  ++  K+  +   +         VE+S    +   E   I+L DCLACSGC+TSAE+V++  QS+ EFL N++N  
Subjt:  EKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDR---------VEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNG-

Query:  ---------KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRD
                 K ++++LSPQSRASLA HF IS L V KKL TF K + +  +FD+S SRD
Subjt:  ---------KVVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRD

Q7TMW6 Cytosolic iron-sulfur assembly component 31.4e-2440.88Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRV---------EVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDN
        M+  FS  L++ DL+DFI PSQ C+  +K  K   +   ++         +V+   +  K E  K+SL DCLACSGCVTSAETV++ +QS +E    +D 
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRV---------EVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDN

Query:  GK--------VVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRD
         K        +V+VS+SPQSRASLA  F + P    +KLT+F K +GV  +FD + +R+
Subjt:  GK--------VVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRD

Q94CL6 Protein NAR15.0e-5476.92Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFS TLR+GDLNDFIAPSQACV+SLK  K    K DR +V  + KQ + EPVKISLKDCLACSGC+TSAETVMLEKQSLDEFLS +  GK V+VS+S
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVH+ ISPL+VFKKLTTFLKS+GVKA+FD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL

Q9H6Q4 Cytosolic iron-sulfur assembly component 33.1e-2442.41Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLK--ATTTKPDRVEVSASKKQL-------KAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDN
        M+  FS  L++ DL+DFI PSQ C+  +K  K   +     R+E   S  Q+       + E  K+SL DCLACSGC+TSAETV++ +QS +E    +D 
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLK--ATTTKPDRVEVSASKKQL-------KAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDN

Query:  GK--------VVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSR
         K        +V+VS+SPQSRASLA  F ++P    +KLT+F K +GV  +FD + SR
Subjt:  GK--------VVIVSLSPQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSR

Arabidopsis top hitse value%identityAlignment
AT4G16440.1 ferredoxin hydrogenases3.5e-5576.92Show/hide
Query:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS
        MSEKFS TLR+GDLNDFIAPSQACV+SLK  K    K DR +V  + KQ + EPVKISLKDCLACSGC+TSAETVMLEKQSLDEFLS +  GK V+VS+S
Subjt:  MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLS

Query:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL
        PQSRASLAVH+ ISPL+VFKKLTTFLKS+GVKA+FD SCSRDL
Subjt:  PQSRASLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAAATTCTCGGCAACATTGAGGATAGGCGATCTGAATGATTTCATAGCGCCTTCTCAGGCTTGCGTTGTTTCTCTCAAGGGGCTTAAAGCCACGACC
ACGAAGCCGGATAGAGTTGAGGTTTCGGCTTCTAAGAAGCAATTGAAAGCAGAGCCAGTTAAAATTTCACTGAAGGATTGCTTAGCATGCAGTGGTTGTGTAACA
TCAGCAGAGACAGTGATGCTGGAGAAGCAAAGTTTGGATGAATTTCTTTCCAACATGGATAATGGAAAGGTTGTAATTGTCTCATTATCTCCCCAATCTAGAGCC
TCACTCGCTGTACATTTTGGTATCTCCCCTCTAAAGGTTTTTAAGAAACTCACGACATTTTTGAAGTCCATGGGAGTAAAAGCTATATTTGATGCAAGTTGCAGT
AGAGATTTACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAAATTCTCGGCAACATTGAGGATAGGCGATCTGAATGATTTCATAGCGCCTTCTCAGGCTTGCGTTGTTTCTCTCAAGGGGCTTAAAGCCACGACC
ACGAAGCCGGATAGAGTTGAGGTTTCGGCTTCTAAGAAGCAATTGAAAGCAGAGCCAGTTAAAATTTCACTGAAGGATTGCTTAGCATGCAGTGGTTGTGTAACA
TCAGCAGAGACAGTGATGCTGGAGAAGCAAAGTTTGGATGAATTTCTTTCCAACATGGATAATGGAAAGGTTGTAATTGTCTCATTATCTCCCCAATCTAGAGCC
TCACTCGCTGTACATTTTGGTATCTCCCCTCTAAAGGTTTTTAAGAAACTCACGACATTTTTGAAGTCCATGGGAGTAAAAGCTATATTTGATGCAAGTTGCAGT
AGAGATTTACCTTAA
Protein sequenceShow/hide protein sequence
MSEKFSATLRIGDLNDFIAPSQACVVSLKGLKATTTKPDRVEVSASKKQLKAEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFLSNMDNGKVVIVSLSPQSRA
SLAVHFGISPLKVFKKLTTFLKSMGVKAIFDASCSRDLP