; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G005900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G005900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionX8 domain-containing protein
Genome locationCmo_Chr18:5532672..5534063
RNA-Seq ExpressionCmoCh18G005900
SyntenyCmoCh18G005900
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573531.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6499.17Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
        MSSRSTRLTILHLSVLLAFIVAPRRSEGQ EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

XP_022142612.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia]1.1e-5486.55Show/hide
Query:  SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSA
        S   RL IL LS+LL FI+AP+R EGQLEEWCIADEQVPDDELQRALDWACGKGGADC  IQVK+PCFYPNTVRDHASYAFN+YYQKFKHKGA+C+FNSA
Subjt:  SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSA

Query:  AMVTALDPSHGSCKFEYVP
        AMVTALDPSHGSCKFEYVP
Subjt:  AMVTALDPSHGSCKFEYVP

XP_022925351.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]1.1e-64100Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
        MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

XP_022966757.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima]8.1e-6396.69Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
        MSSRSTRLTILHLSVLLAF+VAPRRSEGQ EEWCIADEQVPDDELQRALDWACGKGGA+CGDIQVKRPCFYP+TVRDHASYAFNSYYQKFKHKGASCFFN
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

XP_023542518.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita pepo subsp. pepo]4.3e-6499.17Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
        MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTAL+PSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

TrEMBL top hitse value%identityAlignment
A0A0A0LW57 X8 domain-containing protein8.5e-5081.15Show/hide
Query:  SRSTRLTILHLSVLLAFIVAPRRSEGQL---EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFF
        S ST L IL LS LL FI+ P  S G +   EEWCIADEQVPDDELQRALDWACGKGGADC +IQ+K+PCFYPNTVRDHASYAFNSYYQKFKHKGA+C+F
Subjt:  SRSTRLTILHLSVLLAFIVAPRRSEGQL---EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFF

Query:  NSAAMVTALDPSHGSCKFEYVP
        NSAAMVT+LDPSHGSCKFEYVP
Subjt:  NSAAMVTALDPSHGSCKFEYVP

A0A1S3CJN7 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like8.5e-5078.69Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQL-EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFF
        MSS +  + IL+LS LL FI+ P  S+  + EEWCIADEQVPDDELQRALDWACGKGGADC +IQ+K+PCFYPNT+RDHASYAFNSYYQKFKHKGA+C+F
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQL-EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFF

Query:  NSAAMVTALDPSHGSCKFEYVP
        NSAAMVT+LDPSHGSCKFEYVP
Subjt:  NSAAMVTALDPSHGSCKFEYVP

A0A6J1CNC5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like5.1e-5586.55Show/hide
Query:  SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSA
        S   RL IL LS+LL FI+AP+R EGQLEEWCIADEQVPDDELQRALDWACGKGGADC  IQVK+PCFYPNTVRDHASYAFN+YYQKFKHKGA+C+FNSA
Subjt:  SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSA

Query:  AMVTALDPSHGSCKFEYVP
        AMVTALDPSHGSCKFEYVP
Subjt:  AMVTALDPSHGSCKFEYVP

A0A6J1EBZ4 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like5.5e-65100Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
        MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

A0A6J1HUR1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like3.9e-6396.69Show/hide
Query:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN
        MSSRSTRLTILHLSVLLAF+VAPRRSEGQ EEWCIADEQVPDDELQRALDWACGKGGA+CGDIQVKRPCFYP+TVRDHASYAFNSYYQKFKHKGASCFFN
Subjt:  MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFN

Query:  SAAMVTALDPSHGSCKFEYVP
        SAAMVTALDPSHGSCKFEYVP
Subjt:  SAAMVTALDPSHGSCKFEYVP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 12.7e-2146.02Show/hide
Query:  STRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAM
        ST + +LH+S    F+     ++   + +CIA + V    LQ ALDWACG G ++C +IQ    C+ PN V+ HAS+AFNSYYQK      SC F   AM
Subjt:  STRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAM

Query:  VTALDPSHGSCKF
        +T  DPSHGSC F
Subjt:  VTALDPSHGSCKF

Q84V39 Major pollen allergen Ole e 103.7e-1844.83Show/hide
Query:  EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF
        ++WC+   +  D +LQ  +D+ C + G DCG IQ    CF PNTVR HASYA NS+YQ        C F+    +T+ DPS+GSC F
Subjt:  EEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF

Q8VYE5 Glucan endo-1,3-beta-glucosidase 125.5e-2248.94Show/hide
Query:  GQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP
        G  ++WCIA  Q    ELQ ALDWACG G  DC  +Q  +PCF P+TV  HASYAFN+YYQ+       C FN A++    DPS+G+C +   P
Subjt:  GQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP

Q94CD8 Glucan endo-1,3-beta-glucosidase 41.5e-1947.06Show/hide
Query:  WCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF
        +C+A     DD+L   L+WACG+G A+C  IQ  +PC+ PN V+ HAS+AFN YYQK K  G +C F+  A+ T  DPS+ +C +
Subjt:  WCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKF

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 56.1e-2142.11Show/hide
Query:  RLTILHLSVLLAFIVAPRRSEG---QLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAA
        RL+IL  +  +  ++   +  G   Q+E WC+A     D  LQ A++WACG+GGADCG IQ   PC  P  V+  AS+ FN+YY K   +  +C FN+ A
Subjt:  RLTILHLSVLLAFIVAPRRSEG---QLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAA

Query:  MVTALDPSHGSCKF
         +T+L+PS G+CK+
Subjt:  MVTALDPSHGSCKF

Arabidopsis top hitse value%identityAlignment
AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein6.0e-2459.77Show/hide
Query:  EWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGA-SCFFNSAAMVTALDPSHGSCKF
        +WCIA        LQ ALD+ACG GGADCG IQ    C+ PNT+RDHAS+AFNSYYQ  KH G+ SC F  AA +T+ DPS GSC F
Subjt:  EWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGA-SCFFNSAAMVTALDPSHGSCKF

AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein2.0e-2755.81Show/hide
Query:  SEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPS
        ++ +  +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  +PCF PNTV+DHAS  FN+YYQ++K  G SC FNS A +T  DPS
Subjt:  SEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPS

AT2G04910.2 Carbohydrate-binding X8 domain superfamily protein5.4e-3358.33Show/hide
Query:  SEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP
        ++ +  +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  +PCF PNTV+DHAS  FN+YYQ++K  G SC FNS A +T  DPSH SC FEYVP
Subjt:  SEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP

AT4G29360.1 O-Glycosyl hydrolases family 17 protein3.9e-2348.94Show/hide
Query:  GQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP
        G  ++WCIA  Q    ELQ ALDWACG G  DC  +Q  +PCF P+TV  HASYAFN+YYQ+       C FN A++    DPS+G+C +   P
Subjt:  GQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP

AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein5.8e-4365.25Show/hide
Query:  STRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVK-RPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAA
        ST L  + L +L+  +  PRRSE + E+WCIADEQ PDDELQ ALDWACGKGGADC  +Q + +PCF PNT+RDHAS+AFNSYYQ +K+KG SC+F  AA
Subjt:  STRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVK-RPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAA

Query:  MVTALDPSHGSCKFEYVP
        M+T LDPSHGSC++EY P
Subjt:  MVTALDPSHGSCKFEYVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCACCTGTCTGTGCTGCTCGCTTTCATCGTAGCTCCACGAAGATCAGAGGGGCAACTTGAGGAGTGGTGCATAGCTGA
TGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGGATTGTGGTGATATTCAAGTGAAGCGTCCTTGTTTTTACCCAAACA
CTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCCGCTGCCATGGTCACCGCTCTCGATCCT
AGTCATGGTTCGTGCAAGTTTGAGTATGTACCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAACAACACTACAATGTCTTCTCGTTCTACTCGGCTCACCATTCTCCACCTGTCTGTGCTGCTCGCTTTCATCGTAGCTCCACGAAGATCAGAGGGGCAACTTGAGGA
GTGGTGCATAGCTGATGAGCAAGTGCCGGATGATGAGCTGCAAAGAGCTCTTGATTGGGCTTGTGGGAAAGGAGGAGCGGATTGTGGTGATATTCAAGTGAAGCGTCCTT
GTTTTTACCCAAACACTGTTAGGGATCATGCTTCTTATGCTTTTAATAGTTACTATCAAAAGTTTAAGCATAAGGGTGCCTCTTGCTTCTTCAATTCCGCTGCCATGGTC
ACCGCTCTCGATCCTAGTCATGGTTCGTGCAAGTTTGAGTATGTACCTTGAAGAAGGGCATGACTTAATCATCGAAGAGGCTTCCAATTATAACTTGAGTATTCAACGCT
TTTGATATGGATGAAGATATTTCAATCATATAATATGAACTATAGATGGTTACAAATTTTGAATGAATGATAGTTTAGAGTTATGATGTTTCGTTAATGTGTTTTAAAAT
CTTTATGTTACTTGATTTGCAAAATTTGAAGTGTAC
Protein sequenceShow/hide protein sequence
MSSRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGDIQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDP
SHGSCKFEYVP