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CmoCh18G006090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionU-box domain-containing protein 35-like
Genome locationCmo_Chr18:7402077..7405250
RNA-Seq ExpressionCmoCh18G006090
SyntenyCmoCh18G006090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573565.1 hypothetical protein SDJN03_27452, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2896.88Show/hide
Query:  MERVVRDRARDCGRGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLPIFYRLVFPRP
        MERVVRDRARDCGRGKLVSF+FRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLPIFYRLVFP P
Subjt:  MERVVRDRARDCGRGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLPIFYRLVFPRP
XP_022142444.1 uncharacterized protein LOC111012574 isoform X1 [Momordica charantia]1.1e-0857.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
XP_022142445.1 uncharacterized protein LOC111012574 isoform X2 [Momordica charantia]1.1e-0857.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
XP_022142446.1 U-box domain-containing protein 35-like isoform X3 [Momordica charantia]1.1e-0857.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
XP_022142447.1 U-box domain-containing protein 35-like isoform X4 [Momordica charantia]1.1e-0857.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
TrEMBL top hitse value%identityAlignment
A0A0A0LVQ5 Uncharacterized protein2.2e-0760Show/hide
Query:  DCGRGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        DCG     SF+FRKSN CVYVGI DN DSS+D LQW L FAVL    ++   VFP
Subjt:  DCGRGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
A0A6J1CKY9 uncharacterized protein LOC111012574 isoform X25.2e-0957.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
A0A6J1CLJ4 uncharacterized protein LOC111012574 isoform X15.2e-0957.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
A0A6J1CM72 U-box domain-containing protein 35-like isoform X35.2e-0957.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
A0A6J1CMT0 U-box domain-containing protein 35-like isoform X45.2e-0957.14Show/hide
Query:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
        R +  DC     G   SF+FRKSN CVYVGIGDNIDSSMD L+W L+FAVLP   ++   +FP
Subjt:  RDRARDCG---RGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLP---IFYRLVFP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGAGTTGTTCGAGATCGAGCTAGGGATTGCGGTCGAGGAAAATTGGTTTCCTTCAATTTTCGCAAATCGAACCCCTGCGTTTACGTCGGGATCGGCGATAACAT
CGATTCCAGTATGGACGACTTACAATGGAATCTCGATTTCGCAGTTTTACCAATCTTCTACCGTCTAGTTTTTCCCCGGCCCATGTGTTAA
mRNA sequenceShow/hide mRNA sequence
AGTGGAATTCCAACGTACTGGCTTCCACTGAGCAATTTCTGTTGCTGGAAGGAGGTATTTGTTCTGAAGATCAAGGATCGACGAGGAAGCACTACTTCGCCGGTGAAGAT
TTTCCAATTAGATCGAAGCTTAAGCAAGAATGAAGAGGAGAAATGGAGCGAGTTGTTCGAGATCGAGCTAGGGATTGCGGTCGAGGAAAATTGGTTTCCTTCAATTTTCG
CAAATCGAACCCCTGCGTTTACGTCGGGATCGGCGATAACATCGATTCCAGTATGGACGACTTACAATGGAATCTCGATTTCGCAGTTTTACCAATCTTCTACCGTCTAG
TTTTTCCCCGGCCCATGTGTTAAGGTGAAGGGCTGTGATGATTGAGAATGATATGCAGGCCAATTGGCAATTCTTGATCTAGTAGGGAGCATCAAACCCAGGTTCTGTCT
CCTCTCTCTCAACAAACAACCTAATCATCAGTTTCAAAACCCAAATCTCATGATGATTGCGTTTATAAGTATTGAAGTTATCTCTATTGGTGCGGGACCTTTTGAAGAAA
TCAAAAGAAAAGTTATGAGCTTATATTCAAAGTGGACAATATCATATCAATGTGGAGGTCGTGGTTTCTAACAAATACGAAGATTTCTGTGATGTGAAAATCATATATGA
AGGAAAGGAATCCACCTACGAAATGAGTGAGTTGTCCTCCTTGGTCGTATATTCCCTCATCTCCGAATGTAAGCAGCAGCAGCAGCAACAGCAACATCCAATTCAAGAAC
ATCAGTGGTTTCTTCTCTTGGAGAACATCATCTTCATGTCTCCTGATCCACTGATGTTACGTTAACAGACAGCCTTGAATTCACTTTACAGTGAACTGTACTGAAGCTTT
AGATGTCAAAAGGCAGAATGATTTGAACCCATCTTCCGAGAGGAACGTGTCTGTGTCTGTCTGTGGCGTGAACCATATTTTACTAAAAGAAATCAAACTCGAGATAATTA
TCAGATGATTTGGAATCGGGAGCAGGTCTGGTAGCCATCACTGCTTTTCCACTGACTGGAGGTGCTGGTGATGGTATCCTCTCGATCTCAACAGGCTTCGGTACGTCTGG
TGGCGAAGCACATCGTATCAACGCCCAGTTAACACCTTCAAAGAACGGGTGTTGCTTGATCTCAGTTGCCCCTCTTTTGTAAGCTAACCTATGCTGTGGTTCCTTGACGA
GCAATCCCCTGATGAGATCCCTTGCAGCAAAACTGACAACTGGGGAATCTGGAAACCGCAATGGCTGACCAACGACGTTGAACAACGTCGCCCGATTCCCAGATCCTTTA
AAAGGAGTTTTACCAAACAACAGTTCGTATAGGAAGATTCCAAAAGTCCACCAGTCGACAGCACTTCCGTGACCTTCGCCTTTAATGATCTCGGGTGCCAAGTACTCATG
TGTACCAACAAATGACATTGACCTCGCCTCCGTCGGCTCTGCAATCAGCTCTGGCAATGGTGTTACCTGGTTACCTATTTCAGTCTTGGGTTTTCTATCCTTCTTTGACT
TGCTAGAGAAAAGTCGGGGAGTAAAACACGACGTGGGAACTACACAGGATGGCTGGATGCAGGAAGGCTCGATACAAGCTGGCTGGGCACAGTAAGCTGAATTCTTTCGT
AAGGATTCGGACTCAGAACATGAGCCCTTCACTAATGTTGGACTAACAGCACATCTTAGGGAAAGATCGAAGTCTGAAAGCATAATGTGTCCGTCTTCCCTCACAAGAAC
ATTCTCGGGCTTAAGGTCCCGATATACAATCCCAAGCATGTGAAGATACTCGAGTGCTAGGAGGACCTCCGCTACGTAAAATCTGCACCAAAATATCATACCATTAATAA
GCTTTATGCAGGTCTTCTAACATGGGCCACTATCTCTCCAAAAGAGAGAAATGATGCTGGTAGTCTATGGAATCATGGGAAATCAAAAGGAATTGAACCACTATATGCAA
GTCAACAAAATTGAAAGAGACATTCATAGAGTTCGAAGCATCGAACATACTTCACCGCTTGTTCGGGAAAATACTTCCCCGGCTGTCTCTGCCTTAGAGTGTGTAAGTCT
CCCCCAGGGCAGAACTCCATCACCAAGCATGAGAACTTGTCAGTCTCAAAATGTGTATACAATGTAGGAAGGAATGGATGATCAAGAGACTGCAATATTTCTCTTTCGGT
CTGAGCACGAAGCAACTTCTTCCGACTAGCCAGAGACCCTTTGTCCATAACCTTCATTGCAAAATAACACTTAGTGCCACTCAATTCCGACAAGTAGACACTTCCGATAT
CGCCACAACCCAGTCTCTTCAATAGTCTAAAATGGCCTAATCCCAACATCCCATCCCTTGCACGTACAGCTTGGATAGCCTCCCATCTCAAGTCATTTGATTTGTGAGGC
TTGCTGATACTACTACTAAAGCTGCTACAGGTGCTTTCATCACTGATATCGCTACTCGTACTTCCTCGACATATACTACTCTTACCACTTTCGACCATCTCAACACGGTC
ACTAACTTTCGCGCTCCCACTAGTCTTGGCAAGACTGTTTGTTCCATCATTGACTTTGGCAGAAGCAGAACTATCCTTCCCACTCCCACATTCAGATGTTTTCTTCTCAA
GATCTATAGAGTTCAAGGAATTTTCATTGACTTCCTGATTACAAGACTCAGTAGATTCTTTAGGATTCAAAGTAGA
Protein sequenceShow/hide protein sequence
MERVVRDRARDCGRGKLVSFNFRKSNPCVYVGIGDNIDSSMDDLQWNLDFAVLPIFYRLVFPRPMC