; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G006120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReverse transcriptase
Genome locationCmo_Chr18:7443971..7447300
RNA-Seq ExpressionCmoCh18G006120
SyntenyCmoCh18G006120
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-25877.01Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVRK  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-25776.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-25776.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-25776.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-25776.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase3.1e-25877.01Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVRK  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

A0A5A7UXR6 Reverse transcriptase5.3e-25876.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

A0A5D3B7E7 Reverse transcriptase5.3e-25876.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

A0A5D3BYE6 Reverse transcriptase5.3e-25876.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

A0A5D3C4R1 Reverse transcriptase5.3e-25876.83Show/hide
Query:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT
        V+   N    H        + QARWQE LAEFDF+FEHK G SNQAADALSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKT
Subjt:  VIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKT

Query:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK
        RQFWVE DLL+TKGN                 RLYVPR G LR+KL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK K
Subjt:  RQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAK

Query:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT
        V+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKHVVKLWG+P+SI+SDRDGRFIG+FWTELF+FLGT
Subjt:  VSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGT

Query:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI
        +LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+SPFEIVSGRQP LPH++DHP+AGKNPQA NFT+EW+QT DI
Subjt:  TLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR
        ARAYLEKASK MKKWADKKRRPL FRAGDQVLIKLRPEQ+RFR RKDQRLVRKYEGPVEVLKK+G TSYRVALP WMKI+PVIHVSNLKPYH D +D QR
Subjt:  ARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQR

Query:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS
        N  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP EETSWER EDL +
Subjt:  NATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNS

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.5e-5530.87Show/hide
Query:  ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAE
        ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K        +LL  +  R+ E  +
Subjt:  ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAE

Query:  DLNSAATHIA-RLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLD
          +    +   ++ +P   +L R +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+D
Subjt:  DLNSAATHIA-RLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLD

Query:  FITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNC
        FIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N 
Subjt:  FITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNC

Query:  LLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRR
         +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +    ++ K  +    ++E  Q     + +L   +  MKK+ D K +
Subjt:  LLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRR

Query:  PL-HFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHPVIHVSNLKPY
         +  F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  PL-HFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHPVIHVSNLKPY

P0CT41 Transposon Tf2-12 polyprotein1.5e-5530.87Show/hide
Query:  ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAE
        ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K        +LL  +  R+ E  +
Subjt:  ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAE

Query:  DLNSAATHIA-RLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLD
          +    +   ++ +P   +L R +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+D
Subjt:  DLNSAATHIA-RLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLD

Query:  FITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNC
        FIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N 
Subjt:  FITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNC

Query:  LLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRR
         +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +    ++ K  +    ++E  Q     + +L   +  MKK+ D K +
Subjt:  LLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRR

Query:  PL-HFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHPVIHVSNLKPY
         +  F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  PL-HFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHPVIHVSNLKPY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein6.6e-5632.46Show/hide
Query:  RWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAED
        RW + LA +DF  E+ AG  N  ADA+SR     A+  +    S  ID    +  K +   DP   AV+   K         E         +  E +E 
Subjt:  RWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAED

Query:  L-------NSAATHIARLYVPRTGELRRKLIQECHD-TLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPW
                +    +  RL VP   + +  +++  HD TL+ GH G   T A I   Y+WP ++  I+QY +TC+ CQ  K  + ++ GLL+PLP+    W
Subjt:  L-------NSAATHIARLYVPRTGELRRKLIQECHD-TLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPW

Query:  ESVSLDFITHLPKV-GEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDG
          +S+DF+T LP      + ILV+VDRFSK A FI T K   A     L F+++    G P +I SDRD R     + EL   LG    +SS+ HPQTDG
Subjt:  ESVSLDFITHLPKV-GEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDG

Query:  QTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMK
        Q+ER    L   LR +V    +NW   L   +F +N   + + GKSPFEI  G  P  P I  D     ++  A    +  K  T   +  LE A   M+
Subjt:  QTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMK

Query:  KWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRPNIDLKQ
           +++R+PL    GD VL+        F+     ++ + Y GP  V+KKI   +Y + L +  K H VI+V  LK  +      QR   + P  +L++
Subjt:  KWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNATTRPNIDLKQ

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.1e-5532.79Show/hide
Query:  RWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAED
        RW + LA +DF  E+ AG  N  ADA+SR     A+  +    S  ID    +  K +   DP   AV+   K         E         +  E +E 
Subjt:  RWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAED

Query:  L-------NSAATHIARLYVPRTGELRRKLIQECHD-TLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPW
                +    +  RL VP   + +  +++  HD TL+ GH G   T A I   Y+WP ++  I+QY +TC+ CQ  K  + ++ GLL+PLP+    W
Subjt:  L-------NSAATHIARLYVPRTGELRRKLIQECHD-TLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPW

Query:  ESVSLDFITHLPKV-GEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDG
          +S+DF+T LP      + ILV+VDRFSK A FI T K   A     L F+++    G P +I SDRD R     + EL   LG    +SS+ HPQTDG
Subjt:  ESVSLDFITHLPKV-GEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDG

Query:  QTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMK
        Q+ER    L   LR +     +NW   L   +F +N   + + GKSPFEI  G  P  P I  D     ++  A    +  K  T   +  LE A   M+
Subjt:  QTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHI-IDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMK

Query:  KWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRN
           +++R+PL    GD VL+        F+     ++ + Y GP  V+KKI   +Y + L +  K H VI+V  LK +   PD   +N
Subjt:  KWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRN

Q9UR07 Transposon Tf2-11 polyprotein1.5e-5530.87Show/hide
Query:  ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAE
        ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K        +LL  +  R+ E  +
Subjt:  ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAE

Query:  DLNSAATHIA-RLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLD
          +    +   ++ +P   +L R +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+D
Subjt:  DLNSAATHIA-RLYVPRTGELRRKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLD

Query:  FITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNC
        FIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N 
Subjt:  FITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNC

Query:  LLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRR
         +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +    ++ K  +    ++E  Q     + +L   +  MKK+ D K +
Subjt:  LLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRR

Query:  PL-HFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHPVIHVSNLKPY
         +  F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  PL-HFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHPVIHVSNLKPY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCATTTTCGTGCAGGAGATCAAGTCCTTATCAAGCTGAGACCAGAACAGATCAGATTTCGTAGCCGAAAGGACCA
GAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGGGGCTACCTCCTACCGAGTTGCACTACCCGCATGGATGAAAATCCACCCCGTCATTCATG
TGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATNAACAAGCCCGGTGGCAGGAGTCGTTGGCCGAATTCGACTTCAAGTTCGAACACAAAGCA
GGGAAGAGTAATCAAGCAGCCGACGCGCTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACTCAAGTAAGATCGATGGATCGATGCGTGACAT
CATCAAGGAACATTTACACAAAGACCCATCGGCCAAAGCTGTTGTCGAACTAGCTAAGGCTGGAAAGACACGGCAGTTTTGGGTTGAGGGGGACCTCCTGATAACCAAAG
GAAACAGGTTGTANGAACGCGCCGAAGATCTGAACTCCGCCGCCACCCACATCGCAAGGTTGTACGTCCCAAGAACGGGGGAACTGAGGAGGAAACTCATTCAGGAATGT
CATGATACCTTGTGGGCCGGACATCCTGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGAC
GTGCCTCATCTGCCAACAGGATAAGGTCGAGAAAGCCAAAGTCTCTGGACTCTTGGAACCTCTACCTGTGCCAACAAGACCCTGGGAAAGTGTATCTCTGGACTTCATAA
CGCACCTCCCAAAGGTCGGGGAATATGACGCCATCTTGGTTATTGTAGACCGATTCTCCAAATATGCGACATTCATCCCCACTCCCAAATTATGCTCGGCGGAACTCACA
GCCCAACTGTTTTTCAAACACGTTGTAAAGTTATGGGGCATTCCGTCGAGCATCATCAGTGATAGGGATGGCAGATTCATTGGGACGTTCTGGACTGAGTTATTCGCTTT
CTTGGGAACAACCTTGAACATCTCCTCGAGTTATCACCCTCAAACCGATGGACAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTCGACGCTC
GCCAAAAGAACTGGATACAATTGTTAGATGTCGCCCAATTTTGCTTCAATTGCCAAACCAGCTCATCTACAGGGAAGAGTCCCTTCGAAATTGTAAGTGGACGACAACCG
GCCTTACCCCATATTATTGATCATCCTTATGCAGGAAAAAACCCTCAAGCTCACAACTTTACAAGGGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAA
GGCTTCCAAGCATATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCATTTTCGTGCAGGAGATCAAGTCCTTATCAAGCTGAGACCAGAACAGATCAGATTTCGTA
GCCGAAAGGACCAGAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGGGGCTACCTCCTACCGAGTTGCACTACCCGCATGGATGAAAATCCAC
CCCGTCATTCATGTGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATGCAACCACAAGACCGAACATCGATCTGAAGCAAAAAGAAACAAAGGA
AGTGGAAGAGATCCTAGCCGACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTGTCAAATGGAAGAATCTCCCTACAGAGGAAACAAGCTGGG
AACGCGCCGAAGATCTGAACTCCGCCGCCACCCACATCGCAAGACATAATTGGCTTATTGAAAAGAAGAAAAGAAAAAACATGACACATCAAATGATTATACAAGTACCT
GATGATAACCTATTATGGGTTTCTTTTTTTTCTGTTTTGTTGTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCATTTTCGTGCAGGAGATCAAGTCCTTATCAAGCTGAGACCAGAACAGATCAGATTTCGTAGCCGAAAGGACCA
GAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGGGGCTACCTCCTACCGAGTTGCACTACCCGCATGGATGAAAATCCACCCCGTCATTCATG
TGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATNAACAAGCCCGGTGGCAGGAGTCGTTGGCCGAATTCGACTTCAAGTTCGAACACAAAGCA
GGGAAGAGTAATCAAGCAGCCGACGCGCTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACTCAAGTAAGATCGATGGATCGATGCGTGACAT
CATCAAGGAACATTTACACAAAGACCCATCGGCCAAAGCTGTTGTCGAACTAGCTAAGGCTGGAAAGACACGGCAGTTTTGGGTTGAGGGGGACCTCCTGATAACCAAAG
GAAACAGGTTGTANGAACGCGCCGAAGATCTGAACTCCGCCGCCACCCACATCGCAAGGTTGTACGTCCCAAGAACGGGGGAACTGAGGAGGAAACTCATTCAGGAATGT
CATGATACCTTGTGGGCCGGACATCCTGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGAC
GTGCCTCATCTGCCAACAGGATAAGGTCGAGAAAGCCAAAGTCTCTGGACTCTTGGAACCTCTACCTGTGCCAACAAGACCCTGGGAAAGTGTATCTCTGGACTTCATAA
CGCACCTCCCAAAGGTCGGGGAATATGACGCCATCTTGGTTATTGTAGACCGATTCTCCAAATATGCGACATTCATCCCCACTCCCAAATTATGCTCGGCGGAACTCACA
GCCCAACTGTTTTTCAAACACGTTGTAAAGTTATGGGGCATTCCGTCGAGCATCATCAGTGATAGGGATGGCAGATTCATTGGGACGTTCTGGACTGAGTTATTCGCTTT
CTTGGGAACAACCTTGAACATCTCCTCGAGTTATCACCCTCAAACCGATGGACAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTCGACGCTC
GCCAAAAGAACTGGATACAATTGTTAGATGTCGCCCAATTTTGCTTCAATTGCCAAACCAGCTCATCTACAGGGAAGAGTCCCTTCGAAATTGTAAGTGGACGACAACCG
GCCTTACCCCATATTATTGATCATCCTTATGCAGGAAAAAACCCTCAAGCTCACAACTTTACAAGGGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAA
GGCTTCCAAGCATATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCATTTTCGTGCAGGAGATCAAGTCCTTATCAAGCTGAGACCAGAACAGATCAGATTTCGTA
GCCGAAAGGACCAGAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGGGGCTACCTCCTACCGAGTTGCACTACCCGCATGGATGAAAATCCAC
CCCGTCATTCATGTGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATGCAACCACAAGACCGAACATCGATCTGAAGCAAAAAGAAACAAAGGA
AGTGGAAGAGATCCTAGCCGACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTGTCAAATGGAAGAATCTCCCTACAGAGGAAACAAGCTGGG
AACGCGCCGAAGATCTGAACTCCGCCGCCACCCACATCGCAAGACATAATTGGCTTATTGAAAAGAAGAAAAGAAAAAACATGACACATCAAATGATTATACAAGTACCT
GATGATAACCTATTATGGGTTTCTTTTTTTTCTGTTTTGTTGTTTTTGTGA
Protein sequenceShow/hide protein sequence
MKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHPVIHVSNLKPYHPDPDDDQRNXQARWQESLAEFDFKFEHKA
GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLXERAEDLNSAATHIARLYVPRTGELRRKLIQEC
HDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELT
AQLFFKHVVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQP
ALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPLHFRAGDQVLIKLRPEQIRFRSRKDQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIH
PVIHVSNLKPYHPDPDDDQRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPTEETSWERAEDLNSAATHIARHNWLIEKKKRKNMTHQMIIQVP
DDNLLWVSFFSVLLFL