; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G006280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr18:8027006..8028654
RNA-Seq ExpressionCmoCh18G006280
SyntenyCmoCh18G006280
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151778.1 chlorophyll a-b binding protein 7, chloroplastic [Momordica charantia]5.1e-12587.85Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKA NFVTGKKLRLRKYT   VAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_022945038.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita moschata]9.8e-12990.28Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_022957420.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]3.9e-12587.04Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPK SNF+TGK+LRLRKYT   VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_022966812.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita maxima]3.2e-12789.47Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKASNFVTGKKLRLRKYTT  VAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

XP_023541134.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita pepo subsp. pepo]1.4e-12789.47Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKASNFVTGKKLRLRKYTT  VAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

TrEMBL top hitse value%identityAlignment
A0A6J1DD44 Chlorophyll a-b binding protein, chloroplastic2.4e-12587.85Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKA NFVTGKKLRLRKYT   VAPRSA VCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWY+AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1FZP5 Chlorophyll a-b binding protein, chloroplastic4.8e-12990.28Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1H0H5 Chlorophyll a-b binding protein, chloroplastic1.9e-12587.04Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPK SNF+TGK+LRLRKYT   VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1HNZ1 Chlorophyll a-b binding protein, chloroplastic1.5e-12789.47Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPKASNFVTGKKLRLRKYTT  VAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

A0A6J1KAB5 Chlorophyll a-b binding protein, chloroplastic1.9e-12587.04Show/hide
Query:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI
        QKNGCPK SNF+TGK+LRLRKYT   VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL                        AAGIFI
Subjt:  QKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFI

Query:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
        PEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
Subjt:  PEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic1.3e-11274.81Show/hide
Query:  IATDLKGEPQSLRLFQKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC--------------
        IA      P S R     G  KAS F+ G++LR+ KY+T   A  +  VC AADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL               
Subjt:  IATDLKGEPQSLRLFQKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC--------------

Query:  ---------AAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG
                 AAGIFIPE LTKIGILNTPSWYTAGE EYFTDTTTLF+VEL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG
Subjt:  ---------AAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG

Query:  SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        SGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Subjt:  SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

P13869 Chlorophyll a-b binding protein, chloroplastic9.0e-10976.1Show/hide
Query:  QKN----GCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAA
        QKN    G  KAS F+ GK+LR+ K+   V +   A    AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLG                       L AA
Subjt:  QKN----GCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAA

Query:  GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELR
        GIFIPEFLTKIG+LNTPSWYTAGE EYFTDTTTLFV+EL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP KIKELR
Subjt:  GIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELR

Query:  TKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        TKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAF+PK
Subjt:  TKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.6e-4441.08Show/hide
Query:  CPKASNFVTGKKLRLRKYTTGVVAPRSAPVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEF
        C     F+TG   RL +  +      SA   +   +  +  W PG   P +L GSL GD GFDPLGL                         AG+ +PE 
Subjt:  CPKASNFVTGKKLRLRKYTTGVVAPRSAPVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEF

Query:  LTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNG
         TKIGI+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +        +E + KE+ NG
Subjt:  LTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNG

Query:  RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF
        RLAMLA +G   QH  TG GP +NL  HL+DP H T+   F
Subjt:  RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic1.8e-6952.94Show/hide
Query:  ASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAAGIFIPEFLTKI
        AS   TG +L   +          + VC    P+RPLWFPGS+PP WLDGSLPGDFGFDPLG                       L   GI IPE L ++
Subjt:  ASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAAGIFIPEFLTKI

Query:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM
        G +   SWY AG  EYF D+TTLFV +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAM
Subjt:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM

Query:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT
        LA +G  FQ  YT   PI+NL AHLADPGH  VF+AFT
Subjt:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic3.8e-10777.5Show/hide
Query:  NFVTGKKLRLRKYTT--GVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEFLTKI
        +F+ GKKLRL+K  T   V  P ++    AADP+RP+WFPGSTPP WLDGSLPGDFGFDPLGL                        AAGIFIPEFLTKI
Subjt:  NFVTGKKLRLRKYTT--GVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEFLTKI

Query:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM
        GILNTPSWYTAGE EYFTD TTLFVVELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAM
Subjt:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM

Query:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        LAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Subjt:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 61.3e-7052.94Show/hide
Query:  ASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAAGIFIPEFLTKI
        AS   TG +L   +          + VC    P+RPLWFPGS+PP WLDGSLPGDFGFDPLG                       L   GI IPE L ++
Subjt:  ASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAAGIFIPEFLTKI

Query:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM
        G +   SWY AG  EYF D+TTLFV +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIKNGRLAM
Subjt:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM

Query:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT
        LA +G  FQ  YT   PI+NL AHLADPGH  VF+AFT
Subjt:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFT

AT1G45474.1 photosystem I light harvesting complex gene 51.9e-3737.92Show/hide
Query:  VTGKKLRLRKYTTGVVAPRSAPVCAAAD-------PNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAAGIFIPEFL
        +TG  L  R+  + V+  R + V AA           R  W PG  PPP+LDG+L GD+GFDPLG                       L  AGI   + L
Subjt:  VTGKKLRLRKYTTGVVAPRSAPVCAAAD-------PNRPLWFPGSTPPPWLDGSLPGDFGFDPLG-----------------------LCAAGIFIPEFL

Query:  TKIGILNTPSWYTAGELEY-FTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
           GI N P WY AG +++ F  T TL VV+ + +G+AE +R+ D + PG    +  F       L G + GYPGG   +PLG      +   + + KEI
Subjt:  TKIGILNTPSWYTAGELEY-FTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI

Query:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV
        KNGRLAM+A++G + Q   T TGPIDNL  HL++P H T+
Subjt:  KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.1e-4541.08Show/hide
Query:  CPKASNFVTGKKLRLRKYTTGVVAPRSAPVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEF
        C     F+TG   RL +  +      SA   +   +  +  W PG   P +L GSL GD GFDPLGL                         AG+ +PE 
Subjt:  CPKASNFVTGKKLRLRKYTTGVVAPRSAPVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEF

Query:  LTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNG
         TKIGI+N P WY AG+ +YF  ++TLFV+E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +        +E + KE+ NG
Subjt:  LTKIGILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNG

Query:  RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF
        RLAMLA +G   QH  TG GP +NL  HL+DP H T+   F
Subjt:  RLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF

AT3G61470.1 photosystem I light harvesting complex gene 22.7e-10877.5Show/hide
Query:  NFVTGKKLRLRKYTT--GVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEFLTKI
        +F+ GKKLRL+K  T   V  P ++    AADP+RP+WFPGSTPP WLDGSLPGDFGFDPLGL                        AAGIFIPEFLTKI
Subjt:  NFVTGKKLRLRKYTT--GVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLC-----------------------AAGIFIPEFLTKI

Query:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM
        GILNTPSWYTAGE EYFTD TTLFVVELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAM
Subjt:  GILNTPSWYTAGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAM

Query:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK
        LAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAFTPK
Subjt:  LAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK

AT5G28450.1 Chlorophyll A-B binding family protein6.9e-5692.23Show/hide
Query:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF
        R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FAAF
Subjt:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAF

Query:  TPK
        TPK
Subjt:  TPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCCACGGACTTGAAAGGAGAGCCACAAAGCTTGAGATTATTCCAGAAGAACGGGTGTCCAAAGGCTTCTAATTTCGTAACAGGGAAGAAATTGAGGTTGAGAAA
GTACACTACCGGCGTTGTTGCTCCTCGATCTGCTCCAGTTTGTGCCGCTGCTGACCCCAATAGACCCCTTTGGTTCCCTGGTAGCACCCCTCCTCCATGGCTCGACGGCA
GCCTCCCCGGTGACTTTGGCTTCGACCCTCTTGGTCTTTGCGCTGCCGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGAATTTTGAACACTCCATCATGGTACACC
GCTGGAGAATTGGAATACTTCACCGACACCACCACCCTCTTCGTCGTCGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATTCTCAAACCCGGCTG
CGTCAACACCGACCCGATCTTCCCCAACAACAAGCTCACCGGAACGGACGTTGGGTACCCAGGAGGGCTGTGGTTCGACCCGCTCGGATGGGGTAGCGGGTCACCCGAAA
AGATCAAGGAGTTGAGAACTAAAGAGATCAAGAACGGTCGATTGGCTATGTTGGCAGTGATGGGTGCATGGTTTCAACACATTTACACCGGCACCGGTCCCATCGACAAT
CTTTTCGCGCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTTACTCCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCCACGGACTTGAAAGGAGAGCCACAAAGCTTGAGATTATTCCAGAAGAACGGGTGTCCAAAGGCTTCTAATTTCGTAACAGGGAAGAAATTGAGGTTGAGAAA
GTACACTACCGGCGTTGTTGCTCCTCGATCTGCTCCAGTTTGTGCCGCTGCTGACCCCAATAGACCCCTTTGGTTCCCTGGTAGCACCCCTCCTCCATGGCTCGACGGCA
GCCTCCCCGGTGACTTTGGCTTCGACCCTCTTGGTCTTTGCGCTGCCGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGAATTTTGAACACTCCATCATGGTACACC
GCTGGAGAATTGGAATACTTCACCGACACCACCACCCTCTTCGTCGTCGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATTCTCAAACCCGGCTG
CGTCAACACCGACCCGATCTTCCCCAACAACAAGCTCACCGGAACGGACGTTGGGTACCCAGGAGGGCTGTGGTTCGACCCGCTCGGATGGGGTAGCGGGTCACCCGAAA
AGATCAAGGAGTTGAGAACTAAAGAGATCAAGAACGGTCGATTGGCTATGTTGGCAGTGATGGGTGCATGGTTTCAACACATTTACACCGGCACCGGTCCCATCGACAAT
CTTTTCGCGCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTTACTCCCAAGTGA
Protein sequenceShow/hide protein sequence
MIATDLKGEPQSLRLFQKNGCPKASNFVTGKKLRLRKYTTGVVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLCAAGIFIPEFLTKIGILNTPSWYT
AGELEYFTDTTTLFVVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN
LFAHLADPGHATVFAAFTPK