; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G006330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRanBP2-type zinc finger protein
Genome locationCmo_Chr18:8050046..8054874
RNA-Seq ExpressionCmoCh18G006330
SyntenyCmoCh18G006330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573592.1 RanBP2-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-16699.3Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPG+PPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDD+SQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

XP_022945886.1 ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita moschata]4.9e-167100Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

XP_022945887.1 ranBP2-type zinc finger protein At1g67325-like isoform X2 [Cucurbita moschata]5.0e-16498.95Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDK  +QKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

XP_022966809.1 ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita maxima]5.4e-16699.3Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRP FFPDD+SQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

XP_023543009.1 ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-16699.65Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDD+SQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

TrEMBL top hitse value%identityAlignment
A0A5D3CW31 RanBP2-type zinc finger protein7.6e-15894.06Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPV APQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGS+MGNSAVYG+PPIMDRYG+ALPMGPG MGPRPGFFPD++SQKKGAD TRDNDW CP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQ  KNDK SKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQ+E++++
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

A0A6J1G249 ranBP2-type zinc finger protein At1g67325-like isoform X12.4e-167100Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

A0A6J1G258 ranBP2-type zinc finger protein At1g67325-like isoform X22.4e-16498.95Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDK  +QKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

A0A6J1HSM2 ranBP2-type zinc finger protein At1g67325-like isoform X22.7e-16398.25Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRP FFPDD+SQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDK  +QKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

A0A6J1HUW6 ranBP2-type zinc finger protein At1g67325-like isoform X12.6e-16699.3Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP
        SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRP FFPDD+SQKKGADATRDNDWPCP
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCP

Query:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
        KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ
Subjt:  KCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ

SwissProt top hitse value%identityAlignment
Q8GZ43 RanBP2-type zinc finger protein At1g673258.2e-11770.69Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+   QG+S    Y+GSG P  +Y G  PYGS +FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGT---MGPRPGFFPDDISQKKGADATRDNDW
        S+PPYDVPFSGGS YH+NY SR  AG+ YRPLH+SGP PY  GS+MG+  +YGMPP +DRYG+ + MGPG+   M PRP F+PD+ SQK+  D+TRDNDW
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGT---MGPRPGFFPDDISQKKGADATRDNDW

Query:  PCPKCGNINFSFRTVCNMRKCNTPKPGS-QGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQDEDNE
         CP CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A +E+++
Subjt:  PCPKCGNINFSFRTVCNMRKCNTPKPGS-QGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQDEDNE

Arabidopsis top hitse value%identityAlignment
AT1G50300.1 TBP-associated factor 153.3e-0439.19Show/hide
Query:  GPGTMGPRPGFFPDDISQKKGADA--TRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQ--GPKNDKGSKQK
        G G  G  PG       Q  GA       NDW CP CGN+N++ R  CN+  CNT KPG    G +  +G   K
Subjt:  GPGTMGPRPGFFPDDISQKKGADA--TRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQ--GPKNDKGSKQK

AT1G67325.1 Ran BP2/NZF zinc finger-like superfamily protein2.4e-11970.93Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+   QG+S    Y+GSG P  +Y G  PYGS +FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGT---MGPRPGFFPDDISQKKGADATRDNDW
        S+PPYDVPFSGGS YH+NY SR  AG+ YRPLH+SGP PY  GS+MG+  +YGMPP +DRYG+ + MGPG+   M PRP F+PD+ SQK+  D+TRDNDW
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGT---MGPRPGFFPDDISQKKGADATRDNDW

Query:  PCPKCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQDEDNE
         CP CGN+NFSFRTVCNMRKCNTPKPGSQG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A +E+++
Subjt:  PCPKCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQDEDNE

AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein5.8e-11870.69Show/hide
Query:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS
        MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA KP+   QG+S    Y+GSG P  +Y G  PYGS +FNGS
Subjt:  MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS

Query:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGT---MGPRPGFFPDDISQKKGADATRDNDW
        S+PPYDVPFSGGS YH+NY SR  AG+ YRPLH+SGP PY  GS+MG+  +YGMPP +DRYG+ + MGPG+   M PRP F+PD+ SQK+  D+TRDNDW
Subjt:  SIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGT---MGPRPGFFPDDISQKKGADATRDNDW

Query:  PCPKCGNINFSFRTVCNMRKCNTPKPGS-QGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQDEDNE
         CP CGN+NFSFRTVCNMRKCNTPKPGS QG  +DK SKQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A +E+++
Subjt:  PCPKCGNINFSFRTVCNMRKCNTPKPGS-QGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQDEDNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCTGCCAAACGTGCTAGAACCGATGGTAGCCGAAGGGAAGATGACTGGACGTGTCCTAGTTGTGGAAACGTCAATTTTTC
ATTTAGAACAACTTGCAATATGCGCAATTGCACTCAACCACGTCCGGCTGATCATAATTCTAAATCTGCTGCCAAGCCTGTTCATGCTCCACAGGGCTACTCCTATTCTG
CCCCTTACATGGGTTCTGGTGCACCCTCTTCAATGTATCCTGGCGTACCACCTTATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCT
GGGGGATCAGCATATCATTACAACTACGGTAGCCGATTTTCTGCAGGCAGCCCCTACAGACCTTTGCACCTATCTGGGCCTGCACCTTATTCTAGTGGATCTTTGATGGG
AAATAGTGCAGTATATGGTATGCCACCCATAATGGATCGCTATGGCATTGCTTTGCCCATGGGCCCTGGGACCATGGGTCCAAGGCCAGGTTTTTTTCCGGATGACATAT
CGCAGAAGAAGGGTGCAGACGCTACTCGTGACAACGATTGGCCATGCCCCAAATGCGGAAACATCAATTTCTCATTTAGAACCGTCTGTAACATGAGGAAATGCAACACG
CCAAAGCCTGGGTCACAGGGTCCCAAAAATGATAAAGGTTCTAAACAAAAGACGCCGGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAACTATCCATTCCGAAC
CAAATGCAATAGACAAAATTGTGGAGCCGACAAGCCAGCGGAGTCGGAGAAATCCCCATCACCGGCACAGGATGAAGACAATGAACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATTCTACAGAACGGCGTTCGTCACGTATACCCGACGGGCATTGCCGTTCCCGAGAGAAAAATAGATACGCGCAGCTATTCCGAGTCCGAGAACAAGATCTCCCTCTCCTC
GTCTTTCTGATTGGTCGCAGTATGTCTCAGGTTGATAGCAGGAATTCCTCTGCTGCCAAACGTGCTAGAACCGATGGTAGCCGAAGGGAAGATGACTGGACGTGTCCTAG
TTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGCACTCAACCACGTCCGGCTGATCATAATTCTAAATCTGCTGCCAAGCCTGTTCATGCTC
CACAGGGCTACTCCTATTCTGCCCCTTACATGGGTTCTGGTGCACCCTCTTCAATGTATCCTGGCGTACCACCTTATGGTTCTTCTATATTCAACGGTTCATCTATACCT
CCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGTAGCCGATTTTCTGCAGGCAGCCCCTACAGACCTTTGCACCTATCTGGGCCTGCACCTTA
TTCTAGTGGATCTTTGATGGGAAATAGTGCAGTATATGGTATGCCACCCATAATGGATCGCTATGGCATTGCTTTGCCCATGGGCCCTGGGACCATGGGTCCAAGGCCAG
GTTTTTTTCCGGATGACATATCGCAGAAGAAGGGTGCAGACGCTACTCGTGACAACGATTGGCCATGCCCCAAATGCGGAAACATCAATTTCTCATTTAGAACCGTCTGT
AACATGAGGAAATGCAACACGCCAAAGCCTGGGTCACAGGGTCCCAAAAATGATAAAGGTTCTAAACAAAAGACGCCGGAGGGTAGCTGGAAGTGTGAGAAATGTAACAA
CATAAACTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAGCCAGCGGAGTCGGAGAAATCCCCATCACCGGCACAGGATGAAGACAATGAACAGT
GAGTTCTAGAACATGTTTGAGGGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTG
TCAAGTTAGTCTACCTCTCTTGATCCGTGTCATGTTGTATTAACTCAATTTAGTTCCTGGTCTTTTCAATCATCAACCGGATTGATCTGGCAAAAGATTTAATGGTTGGT
TTCTAATATTTTAGGAACACATTTACTTTCTTGAATTCACTTATTTAGTTTAGTGGGCCTGTTAACTTGTGCACTAAACATGTTGCGAGTAGACTAGACTCTACCCTTTT
GGGTTCCGGTTTGATCTCTTAATTGTCTTTCTTCTGTTGGGTGTGCCAAACGGATCCTTTCCTAGGACAGGATCCCAAAGATGCATTAGATAGGGTTTTCTTTTGGGTTG
GACTAAGATTTTGGGTTCAGTCCATTGCCTCATCTGACAAACCGCTGGGTCATTCATGGTATTTATGACCCTTATCGGTGGTGTCACATCACATTATTATGGTCAATAAA
TTATGGTTAGCATGTTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGATCGTCAAAAAAAAGTAAATGAGCCTTCCCAAATGGAGTCTTGGGGACGTGACTTGTGTACCATT
TACTAATGTTGGTTAGGTTGCAATGTCTTTCGGGTCAATTCTGTCATCATTATTCACATCTCGTTTATTATTTGTCTTTCCATGCCATTATTGTTCATTAATTTATTGAG
GAACCTCACGCATGTTCATGCAGTGTCGTGGCAGGGCGATTTGGGTATCCAACTGTTTGAAGTAGTTGGTATTCTTCACCTTATCCACTTAGGTAGTTTTATTATTCCCT
TCTTAGGGTGTGGTTTGGTGCTAATTATGGATTATTGCGTGGCCCTGGTACGTTATATAACCAACCCCTGTTTGCATTACATAAATATATCATTAAGGAAGAATTTAGCT
TTAGGAATAATGGAGTCTTAAGAAATATTTTAAGATAGTTGTTT
Protein sequenceShow/hide protein sequence
MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFS
GGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFPDDISQKKGADATRDNDWPCPKCGNINFSFRTVCNMRKCNT
PKPGSQGPKNDKGSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNEQ