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CmoCh18G006700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCopper ion binding protein
Genome locationCmo_Chr18:8553868..8556683
RNA-Seq ExpressionCmoCh18G006700
SyntenyCmoCh18G006700
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573626.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.2e-5198.28Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAA IFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

KAG7012707.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-5199.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKK EQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

XP_022945209.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita moschata]2.1e-52100Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

XP_022967119.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima]1.0e-5199.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASS SGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

XP_023542814.1 uncharacterized protein At2g27730, mitochondrial [Cucurbita pepo subsp. pepo]6.1e-5299.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAA RTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

TrEMBL top hitse value%identityAlignment
A0A0A0LT33 Uncharacterized protein1.1e-4388.03Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGA-STEKISSDKYRNYAVVAGTVTIFG
        MAAARTAARIFSRRFS  GKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEK  ESVA+S+PS S++S SGA STEKIS+DK RNYAVVAGTVTI G
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGA-STEKISSDKYRNYAVVAGTVTIFG

Query:  ALGWYLKSKKKPEEVHD
        ALGWYLKSKKKPEEVHD
Subjt:  ALGWYLKSKKKPEEVHD

A0A1S3CEE3 uncharacterized protein At2g27730, mitochondrial2.5e-4383.2Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK  ESVA+S+PS SAS         S SGAS+EKIS+DK RNYAVV
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV

Query:  AGTVTIFGALGWYLKSKKKPEEVHD
        AGTVTI GALGWYLKSKKKPEEVHD
Subjt:  AGTVTIFGALGWYLKSKKKPEEVHD

A0A5A7T219 Uncharacterized protein2.5e-4383.2Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV
        MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEK  ESVA+S+PS SAS         S SGAS+EKIS+DK RNYAVV
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSAS---------SGSGASTEKISSDKYRNYAVV

Query:  AGTVTIFGALGWYLKSKKKPEEVHD
        AGTVTI GALGWYLKSKKKPEEVHD
Subjt:  AGTVTIFGALGWYLKSKKKPEEVHD

A0A6J1G0C8 uncharacterized protein At2g27730, mitochondrial1.0e-52100Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

A0A6J1HVU8 uncharacterized protein At2g27730, mitochondrial5.1e-5299.14Show/hide
Query:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA
        MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASS SGASTEKISSDKYRNYAVVAGTVTIFGA
Subjt:  MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD

SwissProt top hitse value%identityAlignment
Q9ZUX4 Uncharacterized protein At2g27730, mitochondrial9.6e-2459.82Show/hide
Query:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG
        A R A RI SRRFS SGK+LSEEE+AAEN++IKK EQEKL+KLAR+G  P E+   S +E+  +G+ +S S  S  K+S DK RNYAVVAG V I G++G
Subjt:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG

Query:  WYLKS--KKKPE
        WYLK+  KK+PE
Subjt:  WYLKS--KKKPE

Arabidopsis top hitse value%identityAlignment
AT2G27730.1 copper ion binding6.8e-2559.82Show/hide
Query:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG
        A R A RI SRRFS SGK+LSEEE+AAEN++IKK EQEKL+KLAR+G  P E+   S +E+  +G+ +S S  S  K+S DK RNYAVVAG V I G++G
Subjt:  AARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALG

Query:  WYLKS--KKKPE
        WYLK+  KK+PE
Subjt:  WYLKS--KKKPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCGAGAACGGCCGCAAGGATTTTTTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAAC
TGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGGAGTCGATTCCAAGTGGGTCAGCCTCCTCAGGGTCAG
GAGCATCAACAGAGAAGATATCTAGTGACAAATACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAG
CCAGAGGAAGTCCACGACTGA
mRNA sequenceShow/hide mRNA sequence
CCTTTTCTTGAACGAGTTCCGATTCATTTCTTGGATCGAACGGCTTTGAGAGGTTTAATCTCCGCTCGTTTCGCCTACGGGAATTTTACAACAACAAATCCCCATTCCGC
TTCCTCCAAATCAATTTCCACCGCTTTCTTCCCACAACTCTCTCTCTACCTCTCCTTTCGGAAACGCGATCTATCGAAATGGCAGCAGCGAGAACGGCCGCAAGGATTTT
TTCTCGAAGGTTCTCCGGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCTGAGAATATCTACATCAAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCA
AGGGACCGAAACCAGAAGAAAAGCCGGTAGAGTCTGTAGCGGAGTCGATTCCAAGTGGGTCAGCCTCCTCAGGGTCAGGAGCATCAACAGAGAAGATATCTAGTGACAAA
TACCGCAACTATGCTGTTGTAGCCGGAACCGTGACTATTTTTGGTGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGCCAGAGGAAGTCCACGACTGAGATAGCTAACA
GCATGTAGTTTTTCCATATCATCAGGATCTGGAGGGAGGGAGGGAGGAGGAGTTTGAGTGTTCTCTTTTCCTCTGCTGAATAATCCAGAAATCGAGATGCATGTTGGCTC
TTGGTTTATGAATGAATACATTCTGTTCAGATTTACGTTTCTCTCTGGATAATGGGTTTCTTTTCACCCTTATTTCTTTGTCTTGAAAATTAACAGTGAGTTAGAGACAA
AAATATGGTCTAATTGGGTTTCATTATCGCATTCTCTCCAACAATATTGAGAAAATAAATCCTCCATTTTGATCTCTTAGTGCAAAGCTAACATGTATCTTTCGATTCCC
Protein sequenceShow/hide protein sequence
MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESVAESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKK
PEEVHD