; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G006830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationCmo_Chr18:8745760..8747056
RNA-Seq ExpressionCmoCh18G006830
SyntenyCmoCh18G006830
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648679.1 hypothetical protein Csa_008887 [Cucumis sativus]1.2e-4575.2Show/hide
Query:  LTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWD
        L  T EEISIP    +G  L NF      R  LEMKFIMEFAE+LVLR+MEDPKERDR+FRE +YA+KDRCQKTKEMWSYPLRPYGFWTFDRHN+QL WD
Subjt:  LTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWD

Query:  AQISQVPGRRDPYDDMLQDIHNNSK
         QISQVPGRRDPYDDMLQD +N+SK
Subjt:  AQISQVPGRRDPYDDMLQDIHNNSK

KAG7012731.1 hypothetical protein SDJN02_25484, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-9198.79Show/hide
Query:  MGLKYIEHEPLYGPFLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKF
        MGLKYIEH PLYGP LNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKF
Subjt:  MGLKYIEHEPLYGPFLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKF

Query:  RERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        RERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
Subjt:  RERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]3.7e-4290.11Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKF+MEFAENLV+R+MEDPKERDRKFRE LYAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

XP_022956462.1 uncharacterized protein LOC111458190 [Cucurbita moschata]2.4e-4189.01Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]2.2e-4291.21Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKF+MEFAENLVLR+MEDPKERDRKFRE LYAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888883.7e-4086.81Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAE+LVLR+MEDPKERDR+FRE +YAVKDRCQKTKEMWS PLRPYGFWTFDRHN+QL WD QISQVPGRRDPYDD+LQD +NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A0A6J1DD92 uncharacterized protein LOC1110197161.8e-4290.11Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKF+MEFAENLV+R+MEDPKERDRKFRE LYAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A0A6J1GWE2 uncharacterized protein LOC1114581901.2e-4189.01Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A0A6J1K907 uncharacterized protein LOC1114933471.2e-4189.01Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

A9P8A9 Uncharacterized protein3.7e-4087.91Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK
        M FIMEFAENLVLR+MEDPKERDRKFRER+YAVKDRCQKTKEMWSYPLRPYGFWTF+RHNAQL WDAQISQVPGRRDPYDD+LQD + + K
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein1.8e-3474.12Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD
        M FIMEFAENLVLR+ME+P+ERDRK RE +Y + +RC+K KEMW+ P+RPYGFWTF+RHNAQL WD QISQV GRRDPYDD+L+D
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD

AT1G67350.2 unknown protein1.8e-3474.12Show/hide
Query:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD
        M FIMEFAENLVLR+ME+P+ERDRK RE +Y + +RC+K KEMW+ P+RPYGFWTF+RHNAQL WD QISQV GRRDPYDD+L+D
Subjt:  MKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDRCQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTAAGTACATTGAACATGAGCCCTTGTATGGCCCATTCTTAAATGAAATTAATGGGGATTGTACGGGTTCTGCTCCTTCTTCGAGTCCATTTCTGCGAGTGGT
GAACTGTTGGTTGACGTCTACTGTGGAAGAAATCTCAATTCCTCGATCGATTTTGAAGGGCTTTCACTTGAGAAATTTTAGATCTGGTTTGTTGTTTCGGAAGAAATTAG
AAATGAAGTTCATCATGGAGTTTGCCGAGAATTTGGTATTAAGAATTATGGAGGATCCAAAAGAGAGGGATCGCAAATTCCGAGAGCGCCTGTATGCGGTAAAGGACCGA
TGCCAAAAGACGAAGGAGATGTGGAGCTATCCTCTCCGTCCTTACGGATTTTGGACGTTTGACCGCCACAATGCTCAGCTGCATTGGGATGCACAAATTAGCCAGGTTCC
TGGTAGAAGGGATCCTTATGATGACATGCTACAGGACATCCACAATAACTCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTTAAGTACATTGAACATGAGCCCTTGTATGGCCCATTCTTAAATGAAATTAATGGGGATTGTACGGGTTCTGCTCCTTCTTCGAGTCCATTTCTGCGAGTGGT
GAACTGTTGGTTGACGTCTACTGTGGAAGAAATCTCAATTCCTCGATCGATTTTGAAGGGCTTTCACTTGAGAAATTTTAGATCTGGTTTGTTGTTTCGGAAGAAATTAG
AAATGAAGTTCATCATGGAGTTTGCCGAGAATTTGGTATTAAGAATTATGGAGGATCCAAAAGAGAGGGATCGCAAATTCCGAGAGCGCCTGTATGCGGTAAAGGACCGA
TGCCAAAAGACGAAGGAGATGTGGAGCTATCCTCTCCGTCCTTACGGATTTTGGACGTTTGACCGCCACAATGCTCAGCTGCATTGGGATGCACAAATTAGCCAGGTTCC
TGGTAGAAGGGATCCTTATGATGACATGCTACAGGACATCCACAATAACTCCAAGTGATTTATGAAGAATACTCGCAAGAGCTCTGAAATTGCAGGTGGAAACTGGGAAG
CTCTCGAGCAATTGTTTGAACGTATGTTTTTTGTTGTTTTAATTTCACGTTGTGTTGTTGAACACCTTGTGGTTTGTTGTTGTTTAATAAACGGGCTGGTTTGCGTTTTG
AGCTCATTGTTTTTTCTGACAAAGAGTAACGTAAACAGCCTCGATTGATTAGTAAGAACAAATTAAAATAAAGGTTTTTGTTTAGTTGAGGTTAACTGTATTGTTTGTTC
ATAAAAGTTCCTAAATCT
Protein sequenceShow/hide protein sequence
MGLKYIEHEPLYGPFLNEINGDCTGSAPSSSPFLRVVNCWLTSTVEEISIPRSILKGFHLRNFRSGLLFRKKLEMKFIMEFAENLVLRIMEDPKERDRKFRERLYAVKDR
CQKTKEMWSYPLRPYGFWTFDRHNAQLHWDAQISQVPGRRDPYDDMLQDIHNNSK