; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G006860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G006860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionELMO domain-containing protein
Genome locationCmo_Chr18:8758062..8763796
RNA-Seq ExpressionCmoCh18G006860
SyntenyCmoCh18G006860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573643.1 hypothetical protein SDJN03_27530, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4880.83Show/hide
Query:  LRTHFLRRLWKIGQ-------DALRALWYAAYPDQERQAWYQINGKKLDGSEEIHRLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWF
        + T  LRRL+           DALR+LWYAAYPDQERQAWYQINGKKLDGSEE HRLILDIFPTSVK+TRKKTSCLGIPLCFCWCKYHIYDHANARSRWF
Subjt:  LRTHFLRRLWKIGQ-------DALRALWYAAYPDQERQAWYQINGKKLDGSEEIHRLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWF

Query:  KPRTSIRSVFLQMLSGGKFL
        KPRTSIRSVFLQMLS  + L
Subjt:  KPRTSIRSVFLQMLSGGKFL

KAG7012734.1 hypothetical protein SDJN02_25487, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-4293.26Show/hide
Query:  YPDQERQAWYQINGKKLDGSEEIHRLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSGGKFL
        YPDQERQAWYQINGKKLDGSEE HRLILDIFPTSVK+TRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLS  + L
Subjt:  YPDQERQAWYQINGKKLDGSEEIHRLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSGGKFL

XP_022945164.1 uncharacterized protein LOC111449485 [Cucurbita moschata]4.6e-3459.71Show/hide
Query:  ILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSGGKFLIPVSRVLIGGLCPKIIITSLGKPQLRVYNVSDQRGIY
        + DIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLS                                          
Subjt:  ILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSGGKFLIPVSRVLIGGLCPKIIITSLGKPQLRVYNVSDQRGIY

Query:  ERKYPNCSLPILDERLLEQSSDLLYQVAYTNSCAQRYES
                    DERLLEQSSDLLYQVAYTNSCAQRYES
Subjt:  ERKYPNCSLPILDERLLEQSSDLLYQVAYTNSCAQRYES

XP_028549919.1 ELMO domain-containing protein A isoform X1 [Dendrobium catenatum]1.7e-0430.48Show/hide
Query:  QDALRALWYAAYPDQE-----RQAWYQINGKKLDGSEEIH----------RLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTS
        QDAL+ALW A++P+        + W  +  +  + S +                  +P  V + R+ TSC+G+P+C CW +Y  Y   N RS + K + S
Subjt:  QDALRALWYAAYPDQE-----RQAWYQINGKKLDGSEEIH----------RLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTS

Query:  IRSVF
         RS F
Subjt:  IRSVF

XP_028549926.1 ELMO domain-containing protein A isoform X4 [Dendrobium catenatum]1.7e-0430.48Show/hide
Query:  QDALRALWYAAYPDQE-----RQAWYQINGKKLDGSEEIH----------RLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTS
        QDAL+ALW A++P+        + W  +  +  + S +                  +P  V + R+ TSC+G+P+C CW +Y  Y   N RS + K + S
Subjt:  QDALRALWYAAYPDQE-----RQAWYQINGKKLDGSEEIH----------RLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTS

Query:  IRSVF
         RS F
Subjt:  IRSVF

TrEMBL top hitse value%identityAlignment
A0A287WWX4 ELMO domain-containing protein1.6e-1142.11Show/hide
Query:  QDALRALWYAAYPDQERQA-----WYQINGKKLDGSEEIHRL-------------ILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARS
        Q+ALRALWYA YPDQE Q      W  +  +  D S +  R              IL +   +  ET +++S LG+P+C CWCKYHI+DHA+A S
Subjt:  QDALRALWYAAYPDQERQA-----WYQINGKKLDGSEEIHRL-------------ILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARS

A0A287WWX6 ELMO domain-containing protein1.0e-1041.84Show/hide
Query:  QDALRALWYAAYPDQERQA-----WYQINGKKLDGSEE-------IH---------RLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARS
        Q+ALRALWYA YPDQE Q      W  +  +  D S +       IH         + IL +   +  ET +++S LG+P+C CWCKYHI+DHA+A S
Subjt:  QDALRALWYAAYPDQERQA-----WYQINGKKLDGSEE-------IH---------RLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARS

A0A6J1G077 uncharacterized protein LOC1114494852.2e-3459.71Show/hide
Query:  ILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSGGKFLIPVSRVLIGGLCPKIIITSLGKPQLRVYNVSDQRGIY
        + DIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLS                                          
Subjt:  ILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWFKPRTSIRSVFLQMLSGGKFLIPVSRVLIGGLCPKIIITSLGKPQLRVYNVSDQRGIY

Query:  ERKYPNCSLPILDERLLEQSSDLLYQVAYTNSCAQRYES
                    DERLLEQSSDLLYQVAYTNSCAQRYES
Subjt:  ERKYPNCSLPILDERLLEQSSDLLYQVAYTNSCAQRYES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCGCGAGAGATGAGGAATCAGAGAACTACGGAGATTATTCGGCGCTGCGCACACATTTCCTTCGCCGTCTCTGGAAGATAGGACAGGATGCTCTAAGAGCTCT
GTGGTATGCAGCTTATCCTGATCAAGAGCGTCAGGCGTGGTATCAGATCAATGGAAAGAAATTGGATGGCAGTGAAGAAATCCATCGACTGATTTTAGACATCTTTCCAA
CGTCTGTTAAGGAAACAAGGAAGAAAACCAGCTGCTTAGGAATACCACTTTGCTTTTGCTGGTGTAAATATCACATTTATGATCATGCAAATGCTCGATCTAGATGGTTC
AAACCAAGGACTTCTATCAGATCAGTGTTCCTTCAGATGTTGTCAGGGGGAAAATTCTTGATTCCTGTTAGTCGAGTTCTAATTGGTGGTCTTTGTCCCAAAATTATAAT
CACCAGCCTGGGAAAACCACAGTTGAGAGTTTATAACGTATCGGATCAGCGTGGGATCTATGAACGTAAGTATCCTAATTGCTCGTTGCCTATTTTAGATGAAAGATTAT
TGGAGCAGTCGTCTGACCTTTTGTATCAGGTAGCATACACCAATTCATGTGCACAAAGGTACGAATCCTAG
mRNA sequenceShow/hide mRNA sequence
ACTCTCATTTGATTTGCAGACGGTGGGATGATGAGCGCGAGAGATGAGGAATCAGAGAACTACGGAGATTATTCGGCGCTGCGCACACATTTCCTTCGCCGTCTCTGGAA
GATAGGACAGGATGCTCTAAGAGCTCTGTGGTATGCAGCTTATCCTGATCAAGAGCGTCAGGCGTGGTATCAGATCAATGGAAAGAAATTGGATGGCAGTGAAGAAATCC
ATCGACTGATTTTAGACATCTTTCCAACGTCTGTTAAGGAAACAAGGAAGAAAACCAGCTGCTTAGGAATACCACTTTGCTTTTGCTGGTGTAAATATCACATTTATGAT
CATGCAAATGCTCGATCTAGATGGTTCAAACCAAGGACTTCTATCAGATCAGTGTTCCTTCAGATGTTGTCAGGGGGAAAATTCTTGATTCCTGTTAGTCGAGTTCTAAT
TGGTGGTCTTTGTCCCAAAATTATAATCACCAGCCTGGGAAAACCACAGTTGAGAGTTTATAACGTATCGGATCAGCGTGGGATCTATGAACGTAAGTATCCTAATTGCT
CGTTGCCTATTTTAGATGAAAGATTATTGGAGCAGTCGTCTGACCTTTTGTATCAGGTAGCATACACCAATTCATGTGCACAAAGGTACGAATCCTAGACGTTTATTAAT
ATATATAGAGAGAGATTTAGAGAAGTCTCCATAACTTGCCCAACCAATTCATGTGCAAAAAGTTCTCC
Protein sequenceShow/hide protein sequence
MMSARDEESENYGDYSALRTHFLRRLWKIGQDALRALWYAAYPDQERQAWYQINGKKLDGSEEIHRLILDIFPTSVKETRKKTSCLGIPLCFCWCKYHIYDHANARSRWF
KPRTSIRSVFLQMLSGGKFLIPVSRVLIGGLCPKIIITSLGKPQLRVYNVSDQRGIYERKYPNCSLPILDERLLEQSSDLLYQVAYTNSCAQRYES