CuGenDBv2

Gene ID	CmoCh18G006930
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L17
Genome location	Cmo_Chr18:8813380..8816267
RNA-Seq Expression	CmoCh18G006930
Synteny	CmoCh18G006930
Gene Ontology terms	GO:0002181 - cytoplasmic translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001063 - Ribosomal protein L22/L17 IPR005721 - Ribosomal protein L22/L17, eukaryotic/archaeal IPR018260 - Ribosomal protein L22/L17, conserved site IPR036394 - Ribosomal protein L22/L17 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008446047.1 PREDICTED: 60S ribosomal protein L17-2 [Cucumis melo]

2.7e-94

98.91

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKK QALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

XP_022151946.1 60S ribosomal protein L17-2 [Momordica charantia]

3.0e-93

96.72

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLI+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA SK+K+GQ LRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

XP_022945920.1 60S ribosomal protein L17-2 [Cucurbita moschata]

8.4e-96

100

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

XP_022956721.1 60S ribosomal protein L17-2-like [Cucurbita moschata]

6.6e-93

96.72

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN T+SCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLL+NAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLI+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEK+EPVKKEPETQLATSKSKK QALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

XP_038891549.1 60S ribosomal protein L17-2 [Benincasa hispida]

3.0e-93

97.81

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPE QLATSK+KK QALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPZ4 Uncharacterized protein

1.3e-94

98.91

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKK QALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

A0A1S3BDN4 60S ribosomal protein L17-2

1.3e-94

98.91

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKK QALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

A0A5A7STA3 60S ribosomal protein L17-2

1.3e-94

98.91

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDN TKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKK QALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

A0A6J1G2C7 60S ribosomal protein L17-2

4.1e-96

100

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

A0A6J1HQT9 60S ribosomal protein L17-2-like

4.1e-96

100

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
        SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

SwissProt top hits

e value

%identity

Alignment

O48557 60S ribosomal protein L17

1.1e-79

87.06

Show/hide

Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EP N TKS KA G DLRVHFKNTRETA ALRKLPL KAKRYLEDV+AHKQAIPFRR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK
        SNA+VKGLDVD+L VSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE +  +A  K
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSK

P35266 60S ribosomal protein L17-1

1.2e-76

85.03

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS +P N TKS KA G DLRVHFKNTRETA ALRK+PL KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA
        SNAEVKGLDVD+L +SHIQVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE E+ +A
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA

P35267 60S ribosomal protein L17-2

2.6e-76

82.46

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYSR+P N TKS KA G DLRVHFKNTRETA ALR++PL KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKS
        SNAEVKGLDVD+L +SHIQVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE +  +A  K+
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKS

P51413 60S ribosomal protein L17-2

9.0e-85

89.2

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQA
        SNAEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +KSKK  A
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQA

Q93VI3 60S ribosomal protein L17-1

1.4e-85

90.23

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDNITKSCKARG+DLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKG
        SNAEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +KSKKG
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKG

Arabidopsis top hits

e value

%identity

Alignment

AT1G27400.1 Ribosomal protein L22p/L17e family protein

9.9e-87

90.23

Show/hide

Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDNITKSCKARG+DLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKG
        SNAEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +KSKKG
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKG

AT1G67430.1 Ribosomal protein L22p/L17e family protein

6.4e-86

89.2

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQA
        SNAEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA +KSKK  A
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQA

AT1G67430.2 Ribosomal protein L22p/L17e family protein

5.9e-55

67.05

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Query:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE
        MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHA+RKLPL KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAE
Subjt:  MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAE

Query:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQA
        SNA                                            ELILSEKEEPVKKEPETQLA +KSKK  A
Subjt:  SNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTAAGTACTCAAGGGAGCCGGATAACATCACCAAGTCCTGCAAAGCTCGAGGCTCCGACCTCAGAGTCCATTTCAAGAATACAAGAGAGACTGCGCATGCCCTTAG
GAAGTTGCCCTTGGCCAAGGCAAAGAGGTATTTGGAGGATGTTCTTGCCCACAAGCAGGCTATTCCATTCCGACGTTTCTGCGGAGGAGTTGGACGAACTGCTCAGGCAA
AAAATAGGCACTCAAATGGTCAAGGACGCTGGCCTGTTAAGTCGGCAAAATTCATTCTAGATCTTCTTAAGAATGCCGAGAGTAATGCCGAAGTGAAAGGACTGGACGTT
GATTCTCTCATTGTATCCCACATCCAGGTGAATCAAGCACAAAAACAAAGACGCCGTACCTACCGTGCTCACGGAAGAATTAACCCCTATATGTCATCTCCATGCCACAT
CGAGCTTATTTTGTCAGAAAAGGAAGAACCTGTGAAGAAAGAGCCTGAGACCCAGTTGGCAACGAGTAAAAGCAAGAAGGGTCAAGCTCTCCGCAGTGGTGCTTCATCCT
GA

mRNA sequence

Show/hide mRNA sequence

CTTCCTAGTACTCTTGCTTGCAGGAGGGACTCAATCTGGTTCAGAGAGGTGAAGATTTAGCATCCGCCGCCATGGTTAAGTACTCAAGGGAGCCGGATAACATCACCAAG
TCCTGCAAAGCTCGAGGCTCCGACCTCAGAGTCCATTTCAAGAATACAAGAGAGACTGCGCATGCCCTTAGGAAGTTGCCCTTGGCCAAGGCAAAGAGGTATTTGGAGGA
TGTTCTTGCCCACAAGCAGGCTATTCCATTCCGACGTTTCTGCGGAGGAGTTGGACGAACTGCTCAGGCAAAAAATAGGCACTCAAATGGTCAAGGACGCTGGCCTGTTA
AGTCGGCAAAATTCATTCTAGATCTTCTTAAGAATGCCGAGAGTAATGCCGAAGTGAAAGGACTGGACGTTGATTCTCTCATTGTATCCCACATCCAGGTGAATCAAGCA
CAAAAACAAAGACGCCGTACCTACCGTGCTCACGGAAGAATTAACCCCTATATGTCATCTCCATGCCACATCGAGCTTATTTTGTCAGAAAAGGAAGAACCTGTGAAGAA
AGAGCCTGAGACCCAGTTGGCAACGAGTAAAAGCAAGAAGGGTCAAGCTCTCCGCAGTGGTGCTTCATCCTGATCAAATATTATTGCCGCATTTTGTACTTGTTTTTTTG
TTTCAAAGCAGAGTTTGGTTGCTTAAGTCTAGTCAAATATTAGAACGAGTTGTTTGGTATCCAATGCCTCTTAACTTTGTAGTTTATGGGATCCTCGATCATGTTCATTT
TGGATTTTTATTCCCTTTTAAGCCAAGAGTTCTACAAATCTTTACTTCCTTTTCAACCTCCCTCTTTGTTTAGTTCATTGTTTGAAATCCCAT

Protein sequence

Show/hide protein sequence

MVKYSREPDNITKSCKARGSDLRVHFKNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDV
DSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKGQALRSGASS

CmoCh18G006930 (gene) of Cucurbita moschata (Rifu) v1 genome