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CmoCh18G007200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G007200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2, chloroplastic
Genome locationCmo_Chr18:8999547..9000597
RNA-Seq ExpressionCmoCh18G007200
SyntenyCmoCh18G007200
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QST15317.1 NADH dehydrogenase subunit 2 [Edgeworthia albiflora]1.0e-3896.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        S IF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
YP_006666336.1 NADH dehydrogenase subunit 2 [Pachycladon enysii]1.3e-3895.51Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTS VMSITALLFRWREEP+ISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
YP_009739653.1 NADH dehydrogenase subunit 2 [Rheum nobile]2.2e-3895.51Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMID TSDQKDIPW Y ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
YP_009935314.1 NADH-plastoquinone oxidoreductase subunit 2 [Edgeworthia chrysantha]1.0e-3896.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        S IF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
YP_009993632.1 NADH dehydrogenase subunit 2 [Gonystylus affinis]1.6e-3997.75Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
TrEMBL top hitse value%identityAlignment
A0A1S5QKM1 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic6.4e-3995.51Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTS VMSITALLFRWREEP+ISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
A0A6C0WX36 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic1.1e-3895.51Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMID TSDQKDIPW Y ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
A0A7G9XJ24 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic7.5e-4097.75Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
A0A7H1CPE4 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic4.9e-3996.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        S IF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
J7HSI8 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic6.4e-3995.51Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIFCLILLLMIDSTSDQKDIPWLY ISSTS VMSITALLFRWREEP+ISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
SwissProt top hitse value%identityAlignment
P0CC38 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.0e-4196.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIF LILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
P0CC44 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.0e-4196.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIF LILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
P0CC46 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.0e-4196.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIF LILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
P0CC50 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.0e-4196.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIF LILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
P0CC58 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic5.0e-4196.63Show/hide
Query:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
        SFIF ECILIF LILLLMIDSTSDQKDIPWLY ISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Subjt:  SFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEY
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACGAACCTCTTCAAGTAGGATGTCCTTCGGAAGAACCTCTAAATCCGTTAACGTTATTTAAGCCACAACATCCGGAGAGGGACCTTATCATTTCAGTTACCCACCACTG
CTACAACTATTTCCCTGCCAATGACACGCACCACTCTAGGAAAAGTTTTATTTTCTCAGAATGTATCCTAATTTTTTGCCTAATTCTTCTTCTGATGATCGATTCAACCT
CTGATCAAAAAGATATACCTTGGTTATATTCCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCG
GGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACTCTATGTATTCCTCTATCCG
TAGAGTACAT
mRNA sequenceShow/hide mRNA sequence
GACGAACCTCTTCAAGTAGGATGTCCTTCGGAAGAACCTCTAAATCCGTTAACGTTATTTAAGCCACAACATCCGGAGAGGGACCTTATCATTTCAGTTACCCACCACTG
CTACAACTATTTCCCTGCCAATGACACGCACCACTCTAGGAAAAGTTTTATTTTCTCAGAATGTATCCTAATTTTTTGCCTAATTCTTCTTCTGATGATCGATTCAACCT
CTGATCAAAAAGATATACCTTGGTTATATTCCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCG
GGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACTCTATGTATTCCTCTATCCG
TAGAGTACAT
Protein sequenceShow/hide protein sequence
DEPLQVGCPSEEPLNPLTLFKPQHPERDLIISVTHHCYNYFPANDTHHSRKSFIFSECILIFCLILLLMIDSTSDQKDIPWLYSISSTSLVMSITALLFRWREEPMISFS
GNFQTNNFNEIFQFLILLCSTLCIPLSVEYSMYSSIRRVH