; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G007590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G007590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal protein S21 family protein
Genome locationCmo_Chr18:9214353..9216274
RNA-Seq ExpressionCmoCh18G007590
SyntenyCmoCh18G007590
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573697.1 hypothetical protein SDJN03_27584, partial [Cucurbita argyrosperma subsp. sororia]2.4e-47100Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVRGL
Subjt:  KKVRGL

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4088.89Show/hide
Query:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+H      LH  QQQWRGIRVKVLNGNLERA+TFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

KAG7012773.1 hypothetical protein SDJN02_25526, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-4699.06Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVR L
Subjt:  KKVRGL

XP_022945130.1 uncharacterized protein LOC111449463 [Cucurbita moschata]2.4e-47100Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVRGL
Subjt:  KKVRGL

XP_022966846.1 uncharacterized protein LOC111466431 [Cucurbita maxima]7.1e-4799.06Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVRGL
Subjt:  KKVRGL

TrEMBL top hitse value%identityAlignment
A0A6J1DEG8 uncharacterized protein LOC1110196998.2e-4186.61Show/hide
Query:  MNSLARNISCSIRSSIHATAS------LHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNISCSIRSSIHATAS------LHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKVRGL
        LKAILIKKVRGL
Subjt:  LKAILIKKVRGL

A0A6J1F3V2 uncharacterized protein LOC1114419298.2e-4188.89Show/hide
Query:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+H      LH  QQQWRGIRVKVLNGNLERA+TFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

A0A6J1G018 uncharacterized protein LOC1114494631.2e-47100Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVRGL
Subjt:  KKVRGL

A0A6J1HQF3 uncharacterized protein LOC1114664313.4e-4799.06Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVRGL
Subjt:  KKVRGL

A0A6J1J5L6 uncharacterized protein LOC1114815073.1e-4087.96Show/hide
Query:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+H      LH  QQQWRGIRVKVLNGNLERA+TFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein2.1e-2560.38Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MN++A+ +     + +    SL+   QQ RGIRVKV + +L++A+T LQ+KM+SSG+ERLIK  QTHHIKNSEK+VLARKNLER+I+S D ARKL++ILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRGL
        KKVRGL
Subjt:  KKVRGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATATCGTGCTCCATCAGGTCTTCGATTCACGCCACTGCCTCGCTACATTGCTACCAGCAGCAATGGAGGGGGATCCGAGTGAAGGTACT
GAACGGGAATCTTGAACGGGCAATAACATTCTTGCAAAGGAAGATGCGATCGAGCGGAATCGAGCGCCTGATTAAGCGCGAGCAGACTCACCACATCAAGAACTCCGAGA
AGCGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTCGATCACAGGACCTTGCTCGCAAGCTTAAAGCCATTCTTATCAAGAAAGTCAGGGGTCTGTGA
mRNA sequenceShow/hide mRNA sequence
CTGGAAAGTGGGGTTTGTAAGAACGACGAACTGAGTGGCTAAACCTAGAAATGAACTCGTTGGCGCGGAACATATCGTGCTCCATCAGGTCTTCGATTCACGCCACTGCC
TCGCTACATTGCTACCAGCAGCAATGGAGGGGGATCCGAGTGAAGGTACTGAACGGGAATCTTGAACGGGCAATAACATTCTTGCAAAGGAAGATGCGATCGAGCGGAAT
CGAGCGCCTGATTAAGCGCGAGCAGACTCACCACATCAAGAACTCCGAGAAGCGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTCGATCACAGGACCTTGCTCGCA
AGCTTAAAGCCATTCTTATCAAGAAAGTCAGGGGTCTGTGAGCTCGTGACAATAGGTAGGTGGAAAAGAGGGCTCTGCAGTATAGAATTCACATGCATCTTGCTCTTTGG
ACACGAGCTCAATAGTTACTAATCTCTTTCTTTGAATCTCTTCTTAAACTCCCACTGCCTTTCAACAAGTAGAATTCAAGTTCCTTCACTCATCTGGAAGGCTCCAATAA
GCTGTTTATCATTGTGTTATTTCTTATTTGATCAATTTAGCTGCCTGCTATGTAATGGATCCTTAAATTTCTCTGTCTTCCTCCTTGTTCATCTTCCATTCCATGCAATT
TACTTGGATTCTGTAGAACCCTTCAGTTTGAAGTAAATTATAGAAATGGCAACCCTGCAGGCACTCAACTTGTTCCTATC
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILIKKVRGL