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CmoCh18G007840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G007840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of Unknown Function (DUF239)
Genome locationCmo_Chr18:9362355..9369948
RNA-Seq ExpressionCmoCh18G007840
SyntenyCmoCh18G007840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573720.1 hypothetical protein SDJN03_27607, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1742.11Show/hide
Query:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ
        MDSK FHR LLP                                 LKKLKLIQADLNRINKFPVKTIQ               DG+F+            
Subjt:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ

Query:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
          L  G       +                    RPY+QSHS  VETE+FQLWSMS EF  EG   TVPIRR+T+ DMLRASSVQRF RK
Subjt:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

KAG6573721.1 hypothetical protein SDJN03_27608, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1742.11Show/hide
Query:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ
        MDSK FHR LLP                                 LKKLKLIQADLNRINKFPVKTIQ               DG+F+            
Subjt:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ

Query:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
          L  G       +                    RPY+QSHS  VETE+FQLWSMS EF  EG   TVPIRR+T+ DMLRASSVQRF RK
Subjt:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

XP_022928657.1 uncharacterized protein LOC111435506 [Cucurbita moschata]1.3e-1850.34Show/hide
Query:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWK-KNSLG---RPYDQSH
        LKKLKLIQADLNRINKFPVKTIQ+L             DG+F+     ET                      +++  F    +K K  LG   RPY+QSH
Subjt:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWK-KNSLG---RPYDQSH

Query:  SSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
           VETEMFQLWSMS EF  EG   TVP+RR+T+ DMLRASSVQRF RK
Subjt:  SSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

XP_022928658.1 uncharacterized protein LOC111435507 [Cucurbita moschata]5.1e-1848.97Show/hide
Query:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV
        LKKLKLIQADLNRINKFPVKTIQ+L             DG+F+         H+Q                   +  F       +   RPY+QSHS  V
Subjt:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV

Query:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
        ETEMFQLWSM  EF  EG   TVP+RR+T+ DMLRASSVQRF RK
Subjt:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

XP_023536950.1 uncharacterized protein LOC111798152 [Cucurbita pepo subsp. pepo]4.3e-1748.97Show/hide
Query:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV
        LKKLKLIQADLNRINKFPVKTIQ               DG+F+              L  G       +                    RPY+QSHS  V
Subjt:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV

Query:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
        ETEMFQLWSMS EF  EG   TVPIRR+T+ DMLRASSVQRF RK
Subjt:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

TrEMBL top hitse value%identityAlignment
A0A6J1EKJ1 uncharacterized protein LOC1114355066.5e-1950.34Show/hide
Query:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWK-KNSLG---RPYDQSH
        LKKLKLIQADLNRINKFPVKTIQ+L             DG+F+     ET                      +++  F    +K K  LG   RPY+QSH
Subjt:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWK-KNSLG---RPYDQSH

Query:  SSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
           VETEMFQLWSMS EF  EG   TVP+RR+T+ DMLRASSVQRF RK
Subjt:  SSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

A0A6J1EPP2 uncharacterized protein LOC1114355072.5e-1848.97Show/hide
Query:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV
        LKKLKLIQADLNRINKFPVKTIQ+L             DG+F+         H+Q                   +  F       +   RPY+QSHS  V
Subjt:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV

Query:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
        ETEMFQLWSM  EF  EG   TVP+RR+T+ DMLRASSVQRF RK
Subjt:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

A0A6J1G1Q6 uncharacterized protein LOC1114498701.0e-1641.58Show/hide
Query:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ
        MDSK FHR LLP                                 LKKLKLIQADLNRINK PVKTIQ               DG+F+            
Subjt:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ

Query:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
          L  G       +                    RPY+QSHS  VETEMFQLWSMS E   EG   TVPIRR+T+ DMLRASSVQRF RK
Subjt:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

A0A6J1G1R1 uncharacterized protein LOC1114498725.1e-1641.05Show/hide
Query:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ
        MDSK FHR  LP                                 LKKLKLIQADLNRINK PVKTIQ               DG+F+            
Subjt:  MDSKPFHRTLLP---------------------------------LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQ

Query:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
          L  G       +                    RPY+QSHS  VETEMFQLWSMS E   EG   TVPIRR+T+ DMLRASSVQRF RK
Subjt:  RILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

A0A6J1HUI2 uncharacterized protein LOC1114663176.1e-1748.28Show/hide
Query:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV
        LKKLKLIQADLNRINKFPVKTIQ               DG+F+              L  G       +                    RPY+QSH   V
Subjt:  LKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYDQSHSSVV

Query:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
        ETEMFQLWSMS EF  EG   TVPIRR+T+NDMLRASSV+RF RK
Subjt:  ETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23340.1 Protein of Unknown Function (DUF239)1.4e-0550Show/hide
Query:  YDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS
        Y Q + S    E FQLWS+  E   EG   T+PIRR+T+ DMLRA+SV+RF RK    R+ S+S
Subjt:  YDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS

AT1G23340.2 Protein of Unknown Function (DUF239)1.4e-0550Show/hide
Query:  YDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS
        Y Q + S    E FQLWS+  E   EG   T+PIRR+T+ DMLRA+SV+RF RK    R+ S+S
Subjt:  YDQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS

AT1G70550.1 Protein of Unknown Function (DUF239)3.6e-0656.6Show/hide
Query:  EMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS
        E  QLWS+S E   EG   T+PIRR+T+ DMLRASSVQRF RK    ++ ST+
Subjt:  EMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS

AT1G70550.2 Protein of Unknown Function (DUF239)3.6e-0656.6Show/hide
Query:  EMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS
        E  QLWS+S E   EG   T+PIRR+T+ DMLRASSVQRF RK    ++ ST+
Subjt:  EMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTS

AT5G50150.1 Protein of Unknown Function (DUF239)4.0e-0546.67Show/hide
Query:  LGRPY--DQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK
        L  PY   + + +  E    QLWSMS E    G   ++PIR++TKND+LRA+SV+RF RK
Subjt:  LGRPY--DQSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTAAACCTTTCCACCGTACTCTCCTACCTTTGAAGAAATTAAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAATTCCCTGTCAAAACCATTCAG
CTTTTGAAATCCATTGCTCAAAAGAAAGAAGCCATTGTTTTTAATGATGGAAATTTTGTTTCAAGATCCGCCGGAGAGACTTCTGCCCATGTTCAGAGAATTCTG
TCCATAGGGGACAGTTCCGATCAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAATTCGTTGGGGAGACCATATGAC
CAGAGCCATTCTAGTGTGGTGGAGACGGAAATGTTCCAATTATGGAGCATGTCTGAAGAATTCTCTTCGGAGGGGACAGGAAGGACAGTTCCAATCAGAAGATCG
ACGAAAAATGATATGTTGAGAGCGAGTTCGGTTCAGAGATTCGAAAGAAAAGAACTGGAACGCAGAAAGATCTCGACGAGCGTTTCTCTTCTCCAATTCCTTCAG
CGCGTTGCCCGCCTTGTCGAACATTGTCATAAGGCTATTGTAAGGCATGGAGGTCACAGGATAATACAGCTTCCTATCGCGAAGCTTTTTCAGCGTATCTCCAAC
CTCCCATTTGAAAACTCGCTTGCGACTCTTGAGGAAAACATTCAACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTAAACCTTTCCACCGTACTCTCCTACCTTTGAAGAAATTAAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAATTCCCTGTCAAAACCATTCAG
CTTTTGAAATCCATTGCTCAAAAGAAAGAAGCCATTGTTTTTAATGATGGAAATTTTGTTTCAAGATCCGCCGGAGAGACTTCTGCCCATGTTCAGAGAATTCTG
TCCATAGGGGACAGTTCCGATCAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAATTCGTTGGGGAGACCATATGAC
CAGAGCCATTCTAGTGTGGTGGAGACGGAAATGTTCCAATTATGGAGCATGTCTGAAGAATTCTCTTCGGAGGGGACAGGAAGGACAGTTCCAATCAGAAGATCG
ACGAAAAATGATATGTTGAGAGCGAGTTCGGTTCAGAGATTCGAAAGAAAAGAACTGGAACGCAGAAAGATCTCGACGAGCGTTTCTCTTCTCCAATTCCTTCAG
CGCGTTGCCCGCCTTGTCGAACATTGTCATAAGGCTATTGTAAGGCATGGAGGTCACAGGATAATACAGCTTCCTATCGCGAAGCTTTTTCAGCGTATCTCCAAC
CTCCCATTTGAAAACTCGCTTGCGACTCTTGAGGAAAACATTCAACTGTAG
Protein sequenceShow/hide protein sequence
MDSKPFHRTLLPLKKLKLIQADLNRINKFPVKTIQLLKSIAQKKEAIVFNDGNFVSRSAGETSAHVQRILSIGDSSDQKNDGKGYVESEFSSEIWKKNSLGRPYD
QSHSSVVETEMFQLWSMSEEFSSEGTGRTVPIRRSTKNDMLRASSVQRFERKELERRKISTSVSLLQFLQRVARLVEHCHKAIVRHGGHRIIQLPIAKLFQRISN
LPFENSLATLEENIQL