CuGenDBv2

Gene ID	CmoCh18G008010
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	hybrid signal transduction histidine kinase L
Genome location	Cmo_Chr18:9477774..9478286
RNA-Seq Expression	CmoCh18G008010
Synteny	CmoCh18G008010
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573739.1 hypothetical protein SDJN03_27626, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-84

98.25

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Query:  MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
Subjt:  MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKASFPPGGNGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_022945533.1 uncharacterized protein LOC111449741 [Cucurbita moschata]

1.7e-87

100

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Query:  MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDI
        MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDI
Subjt:  MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDI

Query:  EFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        EFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  EFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_022966907.1 uncharacterized protein LOC111466471 [Cucurbita maxima]

2.7e-80

95.32

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Query:  MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHG SHSRGKEPKLHPDKEGD
Subjt:  MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKA+FPPGGNGGYKGNGN +GNSHGNSFKPF+NGGEMRSEIKHADHHE VDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_023541867.1 uncharacterized protein LOC111801886 [Cucurbita pepo subsp. pepo]

6.2e-85

97.67

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Query:  MSEF--QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEG
        MSEF  QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEG
Subjt:  MSEF--QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEG

Query:  DIEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        DIEFGFDSRNPNGKA+FPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  DIEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_038892720.1 uncharacterized protein LOC120081701 [Benincasa hispida]

3.3e-54

74.73

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Query:  MSEFQQQQQPQ-QPQQPQQAALVYPSSTAGV---KPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSHSRGKEPKLHPD
        MSE QQQQQ Q Q QQ QQ A VYP++ A V    PP HHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEKTH G+  RGKEPKLHPD
Subjt:  MSEFQQQQQPQ-QPQQPQQAALVYPSSTAGV---KPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSHSRGKEPKLHPD

Query:  KEGDIEFGFDSRNPNG-KASFP-PGGNGGYKG--NGNGNG----NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        KEGDIEFGFD RNPNG K  FP  GGNGG KG  NGNGNG    N HGNSFKPF+NGGE RSEIKH DHHE  D NF+A GH
Subjt:  KEGDIEFGFDSRNPNG-KASFP-PGGNGGYKG--NGNGNG----NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BF63 hybrid signal transduction histidine kinase L

7.9e-54

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Query:  MSEFQQQQQ--PQQPQQPQQAALVYP----SSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL
        MSE QQQQ+   QQ QQ QQ A VYP    +S     PP HHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKL
Subjt:  MSEFQQQQQ--PQQPQQPQQAALVYP----SSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL

Query:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNGNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        HPDKEGDIEFGFD RNP+GK  FPPG      GNGG KG GNGNG       N HGNSFKPF+NGGE RSEIKH DHHE  D NF+AGGH
Subjt:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNGNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

A0A5A7ST81 Hybrid signal transduction histidine kinase L

7.9e-54

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Query:  MSEFQQQQQ--PQQPQQPQQAALVYP----SSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL
        MSE QQQQ+   QQ QQ QQ A VYP    +S     PP HHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKL
Subjt:  MSEFQQQQQ--PQQPQQPQQAALVYP----SSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL

Query:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNGNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        HPDKEGDIEFGFD RNP+GK  FPPG      GNGG KG GNGNG       N HGNSFKPF+NGGE RSEIKH DHHE  D NF+AGGH
Subjt:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNGNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

A0A6J1G163 uncharacterized protein LOC111449741

8.4e-88

100

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Query:  MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDI
        MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDI
Subjt:  MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDI

Query:  EFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        EFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  EFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

A0A6J1HP92 uncharacterized protein LOC111466471

1.3e-80

95.32

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Query:  MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHG SHSRGKEPKLHPDKEGD
Subjt:  MSEF-QQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKA+FPPGGNGGYKGNGN +GNSHGNSFKPF+NGGEMRSEIKHADHHE VDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

E5GBJ1 Uncharacterized protein

7.9e-54

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Query:  MSEFQQQQQ--PQQPQQPQQAALVYP----SSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL
        MSE QQQQ+   QQ QQ QQ A VYP    +S     PP HHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKL
Subjt:  MSEFQQQQQ--PQQPQQPQQAALVYP----SSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL

Query:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNGNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        HPDKEGDIEFGFD RNP+GK  FPPG      GNGG KG GNGNG       N HGNSFKPF+NGGE RSEIKH DHHE  D NF+AGGH
Subjt:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNGNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G23530.1 unknown protein

1.0e-08

36.46

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Query:  QQPQQPQQAALVYPSS------TAGVKPPIHH-SNGSFGAVFIVLAVIVVLSALACFLGRLCNR--RVVNQRRKPEKTHGGSHSRG----KEPKLHPDKE
        Q  QQ QQ  +VYP++          KP     S+G+FG VFIVLAVI VLSALAC  GRLCNR  R   Q+      H  + S+     +  +  P + 
Subjt:  QQPQQPQQAALVYPSS------TAGVKPPIHH-SNGSFGAVFIVLAVIVVLSALACFLGRLCNR--RVVNQRRKPEKTHGGSHSRG----KEPKLHPDKE

Query:  GDIEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKP-FDNGGEMRSEIKHA---------DHHEVVDINFRAGG
        GD++FGFD + P  +    P G  G +    G  N  G   +     GG     IKHA         DHH   +I  R GG
Subjt:  GDIEFGFDSRNPNGKASFPPGGNGGYKGNGNGNGNSHGNSFKP-FDNGGEMRSEIKHA---------DHHEVVDINFRAGG

AT1G70470.1 unknown protein

5.7e-12

39.19

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Query:  QPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR-------RVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIE
        QPQ+ QQPQ       S+++   P    S+GSFG  FIVLA I+VL+ALAC  GRLCNR       +  N+  K EK         +  +  P + GD+E
Subjt:  QPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR-------RVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIE

Query:  FGFDSRNPNGKASFPPGGNGG---------YKGNGNGNGNSHGNSFKP
        FGFD + P G  S P G NGG           G G G G   G    P
Subjt:  FGFDSRNPNGKASFPPGGNGG---------YKGNGNGNGNSHGNSFKP

AT1G74055.1 unknown protein

2.0e-04

40.32

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Query:  QQPQQPQQAALVYPSST-----AGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR
        QQPQQ      + P +T     A    P H+S+ S G  F V++V+++L+ L+CFLGR C R
Subjt:  QQPQQPQQAALVYPSST-----AGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR

Sequences

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CDS sequence

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ATGTCGGAGTTCCAACAACAACAACAACCTCAGCAGCCTCAGCAGCCTCAGCAGGCGGCTCTGGTTTATCCCAGCTCCACCGCCGGCGTCAAGCCTCCAATCCACCATTC
CAACGGTTCATTTGGGGCAGTTTTTATTGTTCTTGCTGTTATTGTTGTCTTATCAGCTCTTGCTTGCTTTCTTGGCCGCCTCTGCAACCGGCGAGTTGTAAACCAGAGGC
GGAAGCCGGAGAAGACCCACGGCGGATCTCACTCCAGAGGGAAAGAACCCAAATTGCATCCTGATAAAGAAGGGGACATCGAATTTGGATTTGATTCAAGAAACCCAAAT
GGGAAAGCCAGTTTCCCACCTGGTGGAAATGGAGGATACAAAGGTAATGGTAATGGCAACGGTAATAGCCATGGAAATAGCTTCAAACCCTTCGACAATGGCGGCGAAAT
GAGAAGCGAAATCAAACATGCTGATCATCATGAAGTAGTAGATATCAACTTCAGAGCTGGAGGACATGCTTGA

mRNA sequence

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Protein sequence

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MSEFQQQQQPQQPQQPQQAALVYPSSTAGVKPPIHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNPN
GKASFPPGGNGGYKGNGNGNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

CmoCh18G008010 (gene) of Cucurbita moschata (Rifu) v1 genome