; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G008210 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G008210
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionG-patch domain-containing protein
Genome locationCmo_Chr18:9611405..9617665
RNA-Seq ExpressionCmoCh18G008210
SyntenyCmoCh18G008210
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000467 - G-patch domain
IPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573761.1 hypothetical protein SDJN03_27648, partial [Cucurbita argyrosperma subsp. sororia]4.0e-6199.22Show/hide
Query:  GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKM
        GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKL+ETTDIAASDTKNQERPPSKKAKAMSKKM
Subjt:  GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKM

Query:  RKMLEEERLFREKEFERAFFREFWPDNV
        RKMLEEERLFREKEFERAFFREFWPDNV
Subjt:  RKMLEEERLFREKEFERAFFREFWPDNV

KAG7012834.1 G patch domain-containing protein 8 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-5999.2Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
        MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKL+ETTDIAASDTKNQERPPSKKAKAMSKKMRKM
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM

Query:  LEEERLFREKEFERAFFREFWPDNV
        LEEERLFREKEFERAFFREFWPDNV
Subjt:  LEEERLFREKEFERAFFREFWPDNV

XP_022945156.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]1.3e-59100Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
        MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM

Query:  LEEERLFREKEFERAFFREFWPDNV
        LEEERLFREKEFERAFFREFWPDNV
Subjt:  LEEERLFREKEFERAFFREFWPDNV

XP_022966983.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita maxima]1.6e-5797.6Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
        MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKE+TDIAASDTKNQERP SKKAKAMSKK RKM
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM

Query:  LEEERLFREKEFERAFFREFWPDNV
        LEEERLFREKEFERAFFREFWPDNV
Subjt:  LEEERLFREKEFERAFFREFWPDNV

XP_023542481.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita pepo subsp. pepo]4.9e-5999.2Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
        MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKK KAMSKKMRKM
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM

Query:  LEEERLFREKEFERAFFREFWPDNV
        LEEERLFREKEFERAFFREFWPDNV
Subjt:  LEEERLFREKEFERAFFREFWPDNV

TrEMBL top hitse value%identityAlignment
A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X22.0e-5086.51Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKKMRK
        MDLESG GGSVSA AIDSSNIGFQLLKKHGWREGTGLG+SEQGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASD K NQERPP KK K +SK+MRK
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKKMRK

Query:  MLEEERLFREKEFERAFFREFWPDNV
        M EEERLF+EKEFERAFFREFWP+NV
Subjt:  MLEEERLFREKEFERAFFREFWPDNV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X11.8e-5186.05Show/hide
Query:  GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKK
        GG MDLESG GGSVSA AIDSSNIGFQLLKKHGWREGTGLG+SEQGRLEPVQ SVKNNKRGLGADKVKKK+KET D AASD K NQERPP KK K +SK+
Subjt:  GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKK

Query:  MRKMLEEERLFREKEFERAFFREFWPDNV
        MRKM EEERLF+EKEFERAFFREFWP+NV
Subjt:  MRKMLEEERLFREKEFERAFFREFWPDNV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog3.4e-5086.51Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKKMRK
        M+ ES SGG+VSATAIDSSNIGFQLLKKHGWREGTGLG+SEQGRLEPVQTSVKNNKRGLGADKVKKKLKET DIAASD K NQE PPSKK KA+SK  RK
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTK-NQERPPSKKAKAMSKKMRK

Query:  MLEEERLFREKEFERAFFREFWPDNV
        M EE+R+F+EKEFERAFFREFWPDNV
Subjt:  MLEEERLFREKEFERAFFREFWPDNV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog6.2e-60100Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
        MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM

Query:  LEEERLFREKEFERAFFREFWPDNV
        LEEERLFREKEFERAFFREFWPDNV
Subjt:  LEEERLFREKEFERAFFREFWPDNV

A0A6J1HTU1 G patch domain and ankyrin repeat-containing protein 1 homolog7.6e-5897.6Show/hide
Query:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM
        MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKE+TDIAASDTKNQERP SKKAKAMSKK RKM
Subjt:  MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKM

Query:  LEEERLFREKEFERAFFREFWPDNV
        LEEERLFREKEFERAFFREFWPDNV
Subjt:  LEEERLFREKEFERAFFREFWPDNV

SwissProt top hitse value%identityAlignment
A0JMV4 RNA-binding protein 5-A2.5e-0550Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+Q  V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGA

A4IGK4 RNA-binding protein 52.5e-0550Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+Q  V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGA

A5DSB5 Protein SQS13.8e-0640.32Show/hide
Query:  GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGL
        GGR   + G      A  ID +N+G Q+L++ GW +G GLG+S +G  EP+   VK +K G+
Subjt:  GGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGL

F4JCU0 SUPPRESSOR OF ABI3-52.5e-0540Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDT
        AID SN+G ++L+  GW EG+GLG    G  EPVQ    + + GLG+   +KK+    ++   DT
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDT

Q6DDU9 RNA-binding protein 5-B2.5e-0550Show/hide
Query:  IDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGA
        ID+SNIG ++L+  GW+EG+GLG   QG   P+Q  V+    GLGA
Subjt:  IDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGA

Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein3.6e-2858.33Show/hide
Query:  SGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADK-VKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEER
        S  S  +TAI SSNIGFQLLKKHGW+EGTGLGI+EQG L P+Q   K+NK+GLGA+K  K+K  +  D A  +        SKK+K +SKK+ KM+E E+
Subjt:  SGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADK-VKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEER

Query:  LFREKEFERAFFREFWPDNV
           E EFERAF REFWPDNV
Subjt:  LFREKEFERAFFREFWPDNV

AT3G54230.1 suppressor of abi3-51.8e-0640Show/hide
Query:  AIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDT
        AID SN+G ++L+  GW EG+GLG    G  EPVQ    + + GLG+   +KK+    ++   DT
Subjt:  AIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDT

AT3G57910.1 D111/G-patch domain-containing protein4.6e-0737.68Show/hide
Query:  TAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQ
        T I  SNIGF+LLK+ G++ G+ LG    GR EPV   ++ ++ G+G +   K+ K+  +I A + K +
Subjt:  TAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQ

AT5G08535.1 D111/G-patch domain-containing protein4.6e-3161.34Show/hide
Query:  SGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEERL
        SG S S  AI+SSNIGFQLLKKHGW+EGTGLGI+EQG L P+Q   K+NKRG+GA +  K+      +A    K++E   SK++K +SKKMRKM+E E+ 
Subjt:  SGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEERL

Query:  FREKEFERAFFREFWPDNV
         +EKEFERAFFREFWPDNV
Subjt:  FREKEFERAFFREFWPDNV

AT5G08535.2 D111/G-patch domain-containing protein4.6e-3161.34Show/hide
Query:  SGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEERL
        SG S S  AI+SSNIGFQLLKKHGW+EGTGLGI+EQG L P+Q   K+NKRG+GA +  K+      +A    K++E   SK++K +SKKMRKM+E E+ 
Subjt:  SGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEERL

Query:  FREKEFERAFFREFWPDNV
         +EKEFERAFFREFWPDNV
Subjt:  FREKEFERAFFREFWPDNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCCGAGGCAGAGGGAGAGCGCGCGAGAAATTTTAGGTTTGGAGGAAGTGCGAAAGTTCTACAAGTTTTAAATTCGATTAGGGTTTGGCAACGTATCAGTCTTTT
AAGAATTTTACCTTCCGTTTTTTTTTCCCCACTGGACATCAAGATCATCCAAAAGTTCTGTCCAGGAGGAAGGATGGATTTGGAGTCAGGCTCAGGGGGGTCTGTTTCTG
CTACAGCCATCGATTCCTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACAGGCCTTGGAATTTCCGAGCAGGGTAGGTTGGAACCTGTACAG
ACATCTGTAAAGAATAATAAACGTGGCCTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACTGATATTGCAGCCTCTGATACGAAAAACCAGGAACGTCCTCC
GTCGAAGAAAGCGAAGGCGATGTCGAAAAAGATGAGGAAGATGCTCGAGGAAGAAAGGCTATTTCGAGAGAAGGAATTCGAGAGGGCATTTTTCAGGGAATTTTGGCCAG
ATAATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGCCGAGGCAGAGGGAGAGCGCGCGAGAAATTTTAGGTTTGGAGGAAGTGCGAAAGTTCTACAAGTTTTAAATTCGATTAGGGTTTGGCAACGTATCAGTCTTTT
AAGAATTTTACCTTCCGTTTTTTTTTCCCCACTGGACATCAAGATCATCCAAAAGTTCTGTCCAGGAGGAAGGATGGATTTGGAGTCAGGCTCAGGGGGGTCTGTTTCTG
CTACAGCCATCGATTCCTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACAGGCCTTGGAATTTCCGAGCAGGGTAGGTTGGAACCTGTACAG
ACATCTGTAAAGAATAATAAACGTGGCCTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACTGATATTGCAGCCTCTGATACGAAAAACCAGGAACGTCCTCC
GTCGAAGAAAGCGAAGGCGATGTCGAAAAAGATGAGGAAGATGCTCGAGGAAGAAAGGCTATTTCGAGAGAAGGAATTCGAGAGGGCATTTTTCAGGGAATTTTGGCCAG
ATAATGTGTGATGTTATACATGAACTAGCACTTCCCAAATCATCATGTAAGCAAATTCAATTTCTTTGCCAAAAATCTTGTTTTAATTAGGGTTTATAGCAAGTTAGCAT
TCACCATGTAGTCTGTAGTTTGTAAATGTTTATGATTATTGAATTTAATTTTATAATTATCATAATGTATTATTATTCAATATATATACATTCATACATA
Protein sequenceShow/hide protein sequence
MIAEAEGERARNFRFGGSAKVLQVLNSIRVWQRISLLRILPSVFFSPLDIKIIQKFCPGGRMDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQ
TSVKNNKRGLGADKVKKKLKETTDIAASDTKNQERPPSKKAKAMSKKMRKMLEEERLFREKEFERAFFREFWPDNV