CuGenDBv2

Gene ID	CmoCh18G008400
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	RING-type domain-containing protein
Genome location	Cmo_Chr18:9769064..9773557
RNA-Seq Expression	CmoCh18G008400
Synteny	CmoCh18G008400
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:1902553 - positive regulation of catalase activity (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0005515 - protein binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR001841 - Zinc finger, RING-type IPR011990 - Tetratricopeptide-like helical domain superfamily IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR017907 - Zinc finger, RING-type, conserved site IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7012853.1 Protein NCA1 [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-218

99.5

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Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
        MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC

Query:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
        MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
        AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
Subjt:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL

Query:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
        QAARSYYQQSLNVRQ++SKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
Subjt:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

XP_022139165.1 protein NCA1 isoform X1 [Momordica charantia]

4.7e-200

91.98

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQ-----PEAEKDVADAAKTGGKCPFGYDSQTFKI
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSAR DD S++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQ-----PEAEKDVADAAKTGGKCPFGYDSQTFKI

Query:  GPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLI

Query:  QQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK

XP_022945180.1 protein NCA1-like [Cucurbita moschata]

4.5e-219

100

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
        MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC

Query:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
        MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
        AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
Subjt:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL

Query:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
        QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
Subjt:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

XP_022966763.1 protein NCA1 [Cucurbita maxima]

1.4e-217

99.5

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
        MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD SLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC

Query:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
        MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
        AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
Subjt:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL

Query:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
        QAARSYY QSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
Subjt:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

XP_023542121.1 protein NCA1-like [Cucurbita pepo subsp. pepo]

5.0e-218

99.5

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
        MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD SLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC

Query:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
        MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
        AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
Subjt:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL

Query:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
        QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLE+LTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
Subjt:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPN8 RING-type domain-containing protein

1.5e-191

87.65

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD-GSLKKDQPE-----AEKDVADAAKTGGKCPFGYDSQTFK
        MTPVCPFVKSARPDDASSRKHQ ESACPFAKSGRSDDASSRK Q SES+CP SKS RSDD  SLKK+Q E     AEKDVADAA  GGKCPFGYDSQTFK
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD-GSLKKDQPE-----AEKDVADAAKTGGKCPFGYDSQTFK

Query:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL
        IGPLSCMICQALLFECSRCVPC+HIFCKACISRFNDCPLCGADIEKIEA  +LQATVDRFIEGHARIKR Q+NSDKEQE+V+ESKVVIYED+SMERGAFL
Subjt:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL

Query:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK
        IQQAMRAFRAQNIESAKSRLT+CVEDIRDQLE+ G+S ELCSQLGAVLGTLGDCCRAAGDA+SAIKHFEESVEFLSKLPEKT E+THTLSVSLNKIGDLK
Subjt:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK

Query:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK
        YYEGDL+AARSYY +SLNVRQDASKHH +DP+QILDVAVSLAKVADVDSGLGNEDMAV+ F+EGIKLLESL+LNSENP L+ RR+SV+KFLEGQLAERQK
Subjt:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK

Query:  ATQSS
        ATQ+S
Subjt:  ATQSS

A0A5D3CV76 Binding protein

4.3e-191

87.41

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD-GSLKKDQPE-----AEKDVADAAKTGGKCPFGYDSQTFK
        MTPVCPFVKSARPDDASSRKHQ ESACPFAKSGRSDDASSRK Q SES+CPFSKS RSDD  SL+K+Q E     AEKDV DAA  GGKCPFGYDSQTFK
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD-GSLKKDQPE-----AEKDVADAAKTGGKCPFGYDSQTFK

Query:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL
        IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEK+EA  +LQATVDRFIEGHARIKR Q+NSDKEQE+V+ESKVVIYED+SMERGAFL
Subjt:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL

Query:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK
        IQQAMRAFRAQNIESAKSRLT+CVEDIRDQLE+ G+S ELCSQLGAVLGTLGDCCRAAGDA+SAIKHFEESVEFLSKLPEKT E+THTLSVSLNKIGDLK
Subjt:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK

Query:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK
        YYEGDL+AARSYY +SLNVRQDASKHH +DP+QILDVAVSLAKVADVDSGLGNEDMAV+ F+EGIKLLESL+LNSENP L+ R +SVLKFLEGQLAERQK
Subjt:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK

Query:  ATQSS
        ATQ+S
Subjt:  ATQSS

A0A6J1CBV4 protein NCA1 isoform X1

2.3e-200

91.98

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQ-----PEAEKDVADAAKTGGKCPFGYDSQTFKI
        MTPVCPFVKSARPDDASSRKHQPE+ACPFAKSGRSDDASSRKQQ SE++CPFSKSAR DD S++K+Q      EAEKDVADAA TGGKCPFGYDSQTFK+
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQ-----PEAEKDVADAAKTGGKCPFGYDSQTFKI

Query:  GPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLI
        GPLSCMICQALLFECSRCVPCSHI+CKACISRF DCPLCGADIEKIEAHADLQ TVDRFIEGHARIKRSQ+NSDKEQEEVSESKVVIYED+SMERGAFLI
Subjt:  GPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLI

Query:  QQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKY
        QQAMRAFRAQN ESAKSRLTICVEDIRDQLER GNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEK+ EVTHTLSVSLNKIGDLKY
Subjt:  QQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKY

Query:  YEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK
        YEGDLQAARSYY +SLNVRQDASKHH +DPSQILDVAVSLAKVADVDSGLGNEDMAVNGF+EGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL ERQK
Subjt:  YEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQK

A0A6J1G074 protein NCA1-like

2.2e-219

100

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
        MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC

Query:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
        MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
        AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
Subjt:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL

Query:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
        QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
Subjt:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

A0A6J1HT54 protein NCA1

7.0e-218

99.5

Show/hide

Query:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
        MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDD SLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC
Subjt:  MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSC

Query:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
        MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR
Subjt:  MICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMR

Query:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
        AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL
Subjt:  AFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDL

Query:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
        QAARSYY QSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS
Subjt:  QAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

SwissProt top hits

e value

%identity

Alignment

A5WW08 E3 ubiquitin-protein ligase CHFR

2.0e-04

27.74

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Query:  GRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSCMICQALLFECSRCVPCSHIFCKACIS----RF
        G  ++   RK++ ++   P   SA SD          A  D+     +G +   G  +   +   L+C+ICQ LL++C    PC H FC AC S    R 
Subjt:  GRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSCMICQALLFECSRCVPCSHIFCKACIS----RF

Query:  NDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQ
        + CP C   +E+I  +  L   V+ ++  H    R++
Subjt:  NDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQ

Q5FWP4 E3 ubiquitin-protein ligase CHFR

7.7e-04

27.44

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Query:  PFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSCMICQA
        P ++++ P    S + Q  S  P  K  R++D  +  +    +SCP   S  S   S+K D+ E                            L+C+ICQ 
Subjt:  PFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSCMICQA

Query:  LLFECSRCVPCSHIFCKACIS----RFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQ
        LL +C    PC H FC AC S    R + CP C   +E+I  +  L   V+ ++  H    RS+
Subjt:  LLFECSRCVPCSHIFCKACIS----RFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQ

Q9M2V1 Protein NCA1

1.1e-140

67.09

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Query:  TPVCPFVKSARPDDASSRKHQ--PESACPFAKSGRSDDASSRKQ-QSSESSCPFSKSARSDDGSLKKDQPEAE----KDVADAAKTGGKCPFGYDSQTFK
        T VCPF K+ARPDD S+RK      S CPF+K+ R DDAS+RKQ +++ S CPFSKSAR D+    K  PE E    KD  D+A    KCPFGYDSQTFK
Subjt:  TPVCPFVKSARPDDASSRKHQ--PESACPFAKSGRSDDASSRKQ-QSSESSCPFSKSARSDDGSLKKDQPEAE----KDVADAAKTGGKCPFGYDSQTFK

Query:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL
        +GP SCM+CQALL+E SRCVPC+H+FCK C++RF DCPLCGADIE IE   +LQ  VD+FIEGHARIKRS +N  +++E  +++K VIY D+SMERG+FL
Subjt:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL

Query:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK
        +QQAMRAF AQN ESAKSRL +C EDIRDQL R GN+ ELCSQLGAVLG LGDC RA GD+SSA+KHFEESVEFL KLP    E+THTLSVSLNKIGDLK
Subjt:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK

Query:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL
        YY+ DLQAARSYY ++LNVR+DA KHH   PSQILDVAVSLAKVAD+D  L NE  A +GF+EG++LLESL L+SE+  LEQRR SVL+FL+ Q+
Subjt:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL

Arabidopsis top hits

e value

%identity

Alignment

AT3G54360.1 zinc ion binding

8.1e-142

67.09

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Query:  TPVCPFVKSARPDDASSRKHQ--PESACPFAKSGRSDDASSRKQ-QSSESSCPFSKSARSDDGSLKKDQPEAE----KDVADAAKTGGKCPFGYDSQTFK
        T VCPF K+ARPDD S+RK      S CPF+K+ R DDAS+RKQ +++ S CPFSKSAR D+    K  PE E    KD  D+A    KCPFGYDSQTFK
Subjt:  TPVCPFVKSARPDDASSRKHQ--PESACPFAKSGRSDDASSRKQ-QSSESSCPFSKSARSDDGSLKKDQPEAE----KDVADAAKTGGKCPFGYDSQTFK

Query:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL
        +GP SCM+CQALL+E SRCVPC+H+FCK C++RF DCPLCGADIE IE   +LQ  VD+FIEGHARIKRS +N  +++E  +++K VIY D+SMERG+FL
Subjt:  IGPLSCMICQALLFECSRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFL

Query:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK
        +QQAMRAF AQN ESAKSRL +C EDIRDQL R GN+ ELCSQLGAVLG LGDC RA GD+SSA+KHFEESVEFL KLP    E+THTLSVSLNKIGDLK
Subjt:  IQQAMRAFRAQNIESAKSRLTICVEDIRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLK

Query:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL
        YY+ DLQAARSYY ++LNVR+DA KHH   PSQILDVAVSLAKVAD+D  L NE  A +GF+EG++LLESL L+SE+  LEQRR SVL+FL+ Q+
Subjt:  YYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILDVAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQL

Sequences

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CDS sequence

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ATGACTCCTGTTTGTCCCTTCGTGAAATCTGCTCGTCCCGACGACGCTTCTTCTCGGAAGCACCAGCCGGAATCTGCTTGTCCTTTTGCGAAATCCGGCCGTTCCGATGA
TGCTTCTTCACGAAAACAGCAATCATCAGAGTCTTCTTGTCCGTTTTCGAAATCTGCTCGTTCGGACGACGGTTCTTTGAAGAAGGATCAGCCTGAGGCGGAGAAAGACG
TTGCCGATGCTGCTAAAACTGGCGGCAAATGTCCGTTCGGATATGATTCTCAAACTTTCAAGATTGGTCCTCTAAGCTGTATGATTTGTCAGGCACTTCTCTTTGAATGC
AGCAGATGTGTCCCCTGTTCTCACATTTTCTGCAAAGCATGTATATCACGCTTTAATGATTGCCCCCTGTGTGGAGCTGACATTGAGAAGATTGAAGCACACGCTGATCT
GCAAGCCACGGTCGATCGATTCATTGAAGGTCATGCGAGAATCAAGAGATCTCAGATGAACTCAGACAAAGAGCAGGAGGAAGTTAGTGAAAGTAAAGTAGTTATTTATG
AAGATTTGTCCATGGAGAGAGGTGCTTTCTTGATCCAACAAGCCATGAGGGCATTTCGTGCCCAGAATATTGAAAGTGCCAAATCCAGGCTCACTATCTGTGTTGAAGAT
ATTCGAGATCAATTAGAAAGAGCGGGCAATTCATCAGAATTATGCTCACAGCTTGGAGCAGTTCTAGGCACACTTGGTGATTGTTGTCGAGCAGCTGGGGATGCTAGTTC
TGCAATAAAGCACTTCGAAGAAAGTGTAGAGTTTCTCTCAAAACTACCCGAAAAGACTCGCGAGGTCACGCATACACTTTCTGTTTCACTAAATAAAATTGGCGATCTTA
AGTATTATGAAGGAGACCTTCAAGCTGCAAGATCTTATTATCAGCAGTCTCTTAATGTTCGCCAAGATGCAAGCAAGCATCATTCAGAAGATCCATCCCAGATCCTAGAT
GTGGCTGTTTCGCTTGCAAAAGTTGCAGATGTGGACAGTGGTCTAGGAAATGAGGATATGGCAGTTAATGGGTTCGAGGAAGGCATAAAGTTATTGGAATCGTTAACACT
GAACTCGGAGAATCCTGGTCTTGAGCAGCGACGTCAATCTGTGTTGAAGTTCCTCGAAGGTCAACTTGCAGAGCGACAAAAGGCAACTCAATCCAGTTGA

mRNA sequence

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TCAAATGCCCAACTGAAATTTATAATGTTTTATTTATTTATTGCAAACAGAAATGAATTGATAATTCATATAGATTTACTTTTCAATTGCGGAGTCGCGGGTCGATCTCA
ATAATTTATACATTTCGAGAGCGTTTTAGATAATTTGAGAATTCTGGTGGTTAGGAACCCAACACGATTCGGAAAGCGACTTTGGATGCAGAAATCGACACAAATTTGGG
GATTTTCAATTCAAACCAGGTTCTTAGGGCATTGAACTTCCAGTGGGAGAGGGAGATCGGTCGAGAATCGATATGACTCCTGTTTGTCCCTTCGTGAAATCTGCTCGTCC
CGACGACGCTTCTTCTCGGAAGCACCAGCCGGAATCTGCTTGTCCTTTTGCGAAATCCGGCCGTTCCGATGATGCTTCTTCACGAAAACAGCAATCATCAGAGTCTTCTT
GTCCGTTTTCGAAATCTGCTCGTTCGGACGACGGTTCTTTGAAGAAGGATCAGCCTGAGGCGGAGAAAGACGTTGCCGATGCTGCTAAAACTGGCGGCAAATGTCCGTTC
GGATATGATTCTCAAACTTTCAAGATTGGTCCTCTAAGCTGTATGATTTGTCAGGCACTTCTCTTTGAATGCAGCAGATGTGTCCCCTGTTCTCACATTTTCTGCAAAGC
ATGTATATCACGCTTTAATGATTGCCCCCTGTGTGGAGCTGACATTGAGAAGATTGAAGCACACGCTGATCTGCAAGCCACGGTCGATCGATTCATTGAAGGTCATGCGA
GAATCAAGAGATCTCAGATGAACTCAGACAAAGAGCAGGAGGAAGTTAGTGAAAGTAAAGTAGTTATTTATGAAGATTTGTCCATGGAGAGAGGTGCTTTCTTGATCCAA
CAAGCCATGAGGGCATTTCGTGCCCAGAATATTGAAAGTGCCAAATCCAGGCTCACTATCTGTGTTGAAGATATTCGAGATCAATTAGAAAGAGCGGGCAATTCATCAGA
ATTATGCTCACAGCTTGGAGCAGTTCTAGGCACACTTGGTGATTGTTGTCGAGCAGCTGGGGATGCTAGTTCTGCAATAAAGCACTTCGAAGAAAGTGTAGAGTTTCTCT
CAAAACTACCCGAAAAGACTCGCGAGGTCACGCATACACTTTCTGTTTCACTAAATAAAATTGGCGATCTTAAGTATTATGAAGGAGACCTTCAAGCTGCAAGATCTTAT
TATCAGCAGTCTCTTAATGTTCGCCAAGATGCAAGCAAGCATCATTCAGAAGATCCATCCCAGATCCTAGATGTGGCTGTTTCGCTTGCAAAAGTTGCAGATGTGGACAG
TGGTCTAGGAAATGAGGATATGGCAGTTAATGGGTTCGAGGAAGGCATAAAGTTATTGGAATCGTTAACACTGAACTCGGAGAATCCTGGTCTTGAGCAGCGACGTCAAT
CTGTGTTGAAGTTCCTCGAAGGTCAACTTGCAGAGCGACAAAAGGCAACTCAATCCAGTTGATGGAAAGACGAGATGATGGCTTCTGTTAGAGATCATTCATATGCAACG
TCTTAGTTAAGCAAATAAGCTCCTTTTAGCCGAGAAATGGGGAAAAGATCGCGCGAGCGTTAAGGAAATTTGTCACTATGGAATACGTCGACTTAGATGCTCTCATCGTG
TTTTCTTCAGCATATAGTACAGAAGCATACATAATCGATGTTGCTTTATTCGCATTGCTGAATCAGCAGGTCTGCCCAGTCATCACGTCACGTCTCGTGTATAATGGTGT
TCTTATCGTCTCTAATAAGTCTGGTTTTTGTAGAATTTAGCAGGAACTCCTCACGCTCTTTTTCAGTGAAGTTGTTTGCTAAGCTTGAACCTCTGAAATAAATTGAACTT
TTAAGTAGAATTTGATCTTGTTTATGATGCTTTCTTCCAAGAACATATTTGTTGAGTTTATGCAATATTCAGTTGAACATCGTGGACCTTTCATTGGCATTACAATGCCT
TAATATAATATCTTAAAACTTTACCACATTAAC

Protein sequence

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MTPVCPFVKSARPDDASSRKHQPESACPFAKSGRSDDASSRKQQSSESSCPFSKSARSDDGSLKKDQPEAEKDVADAAKTGGKCPFGYDSQTFKIGPLSCMICQALLFEC
SRCVPCSHIFCKACISRFNDCPLCGADIEKIEAHADLQATVDRFIEGHARIKRSQMNSDKEQEEVSESKVVIYEDLSMERGAFLIQQAMRAFRAQNIESAKSRLTICVED
IRDQLERAGNSSELCSQLGAVLGTLGDCCRAAGDASSAIKHFEESVEFLSKLPEKTREVTHTLSVSLNKIGDLKYYEGDLQAARSYYQQSLNVRQDASKHHSEDPSQILD
VAVSLAKVADVDSGLGNEDMAVNGFEEGIKLLESLTLNSENPGLEQRRQSVLKFLEGQLAERQKATQSS

CmoCh18G008400 (gene) of Cucurbita moschata (Rifu) v1 genome