CuGenDBv2

Gene ID	CmoCh18G008410
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	F-box/LRR-repeat protein At4g29420
Genome location	Cmo_Chr18:9773645..9778160
RNA-Seq Expression	CmoCh18G008410
Synteny	CmoCh18G008410
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily IPR036047 - F-box-like domain superfamily IPR044809 - F-box protein AUF1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573780.1 F-box/LRR-repeat protein, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-238

98.35

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKSLN LSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTP+LSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTLNTMQRAESVESVKLCLDTLF IFPNLSFLKLGPGV SEAETCYQAEGLDGRIGMRDLK+LHASLETYKIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAV
        LDMELLIY NADSHLAGGIMSKRA+
Subjt:  LDMELLIYRNADSHLAGGIMSKRAV

XP_022945179.1 F-box/LRR-repeat protein At4g29420 [Cucurbita moschata]

9.8e-263

100

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGHLSCQV
        LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGHLSCQV
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGHLSCQV

XP_022966761.1 F-box/LRR-repeat protein At4g29420 [Cucurbita maxima]

9.8e-255

98.44

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRL+DSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLEILNLIGVGGLNEPKIHLS LKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPM+SDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGV SEAETCYQAEGLDGRIGMRDLKK+HASLETYKIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG
        L MELLIY NADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG

XP_023542813.1 F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo]

3.4e-255

98.66

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISY HDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGV SEAETCYQAEGLD RIGMRDLKK+HASLETYK+ELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG
        LDMELLIY NADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG

XP_038893164.1 F-box/LRR-repeat protein At4g29420 [Benincasa hispida]

1.9e-229

87.97

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPP LVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRA ET+LLV PFKVILK+LMNDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVG+A+EWLPAIGR LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+ SLKCLTLEFIRLDDEDLSEVN NF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLE+LNL+GVGGLNEPKIHL HLKTC+W VSNAPVSLSI APSLSKLELKCVKPKSLII+TPMLSDFHFCL+DASGLQVN FPCLRKL LH PCL SLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTL+TMQRAES+ESVK CLDT+FEIFPNLSFLKLGPGVLSEAETCYQAEGL+GR+GMRDLKK+H+SL+TYKIE+KLPFII ILEKCTD 
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH
         DM LL+Y NADS + GGI+ KRA NHPRP+WRWELWKEG  E WAKG+
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPS5 Uncharacterized protein

3.4e-221

85.52

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKS+NVLSR+VRSVNLFCSLDRYLKSRA ET+LLV PFKVILK+L+N+F+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVG+A+EWLP+IG+ LTSLSIVDFWVQSCWRQSKILALITL C NL ELELKNAWLSVDGL+R+NSLK LTLEFIRLDDEDLSE+N NF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLE+LNLIGVGGLNEPKI L HLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LII+TPMLSDFHFCL+DASGLQV+EFPCLRKL LHFP L+SLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSART+KELTL+TMQRAES+ESVK CLDT+FEIFPNLSFLKLGPGVL EAET YQAEGL+GR+GMRDLKK  ++L+T KIELKLPFII ILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH
         DM LL+Y+NADS + GGIMSKRA+NH RP+WRWELWKEG +E WAKG+
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH

A0A1S4DWD1 F-box/LRR-repeat protein At4g29420

8.5e-228

87.53

Show/hide

Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSR+VRSVNLFCSLDRYLKSRA ET+LLV PFKVILK+L+NDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVG+A+EWLPAIG+ LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+NSLK LTLEFIRLDDEDLSE+N NF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLE+LNLIGVGGLNEPKI L HLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LII+TPMLSDFHFCL+DASGLQV+EFPCLRKL LHFPCL+SLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTL+TMQRAESVESVK CLDT+FEIFPNL FLKLGPGVLSEAETCYQAEGL+GR+GMRDLKK H+SL+T KIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH
         DM LL+Y+NADS + GGIMSKRA+N  RP+WRWELWK+G +E WAKG+
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH

A0A5D3CX32 F-box/LRR-repeat protein

8.5e-228

87.53

Show/hide

Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSR+VRSVNLFCSLDRYLKSRA ET+LLV PFKVILK+L+NDF+ALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVG+A+EWLPAIG+ LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+NSLK LTLEFIRLDDEDLSE+N NF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLE+LNLIGVGGLNEPKI L HLKTC+WTVSNAPVSL I APSLSKLELKCVKPK LII+TPMLSDFHFCL+DASGLQV+EFPCLRKL LHFPCL+SLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTL+TMQRAESVESVK CLDT+FEIFPNL FLKLGPGVLSEAETCYQAEGL+GR+GMRDLKK H+SL+T KIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH
         DM LL+Y+NADS + GGIMSKRA+N  RP+WRWELWK+G +E WAKG+
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGH

A0A6J1G095 F-box/LRR-repeat protein At4g29420

4.8e-263

100

Show/hide

Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGHLSCQV
        LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGHLSCQV
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKGHLSCQV

A0A6J1HNV0 F-box/LRR-repeat protein At4g29420

4.8e-255

98.44

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MDDLPPSLVLEILNRL+DSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
        VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        PHLEILNLIGVGGLNEPKIHLS LKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPM+SDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS
        TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGV SEAETCYQAEGLDGRIGMRDLKK+HASLETYKIELKLPFIIPILEKCTDS
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDS

Query:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG
        L MELLIY NADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG
Subjt:  LDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPWAKG

SwissProt top hits

e value

%identity

Alignment

Q9M0E1 F-box/LRR-repeat protein At4g29420

7.4e-112

47.22

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Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPP L ++IL+R+ DS  LARCRVASK+LN LSREVR+VNL C+  RYLKSR++   ++V PFK I +SL+ +   + S+S+GV+K+L  +S++  +
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
         ED S DL+LTDV F +EWLP +   L +LSI DFW+QSCWR+S ILALI+  C  L +LE+KNAWLSV GL  + +L+ LTLEFIRLDDE+L +VN  F
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        P L+ LNLIGVGGL EP+IH  HLK+C WTVSNAP+SL+I AP+L +L+LKC KPKSL+++TP L   H  ++DA G+   EF  L+ L+L  P +Y LI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE-GLDGRIGMRDLKKLHASLET---YKIELKLPFIIPILEK
        +  S    IK+L +++++  E  E ++L L T+ + FP ++ L L P   S+ ET +Q++ GL    G   LK++ A ++      +   + FI  I+ K
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE-GLDGRIGMRDLKKLHASLET---YKIELKLPFIIPILEK

Query:  CTDSLDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPW
             DM L+I+++ D  +   ++S   +++PR +W+W +W EG ++ W
Subjt:  CTDSLDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPW

Arabidopsis top hits

e value

%identity

Alignment

AT4G29420.1 F-box/RNI-like superfamily protein

5.2e-113

47.22

Show/hide

Query:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD
        MD+LPP L ++IL+R+ DS  LARCRVASK+LN LSREVR+VNL C+  RYLKSR++   ++V PFK I +SL+ +   + S+S+GV+K+L  +S++  +
Subjt:  MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDD

Query:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF
         ED S DL+LTDV F +EWLP +   L +LSI DFW+QSCWR+S ILALI+  C  L +LE+KNAWLSV GL  + +L+ LTLEFIRLDDE+L +VN  F
Subjt:  VEDWSDDLFLTDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNF

Query:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI
        P L+ LNLIGVGGL EP+IH  HLK+C WTVSNAP+SL+I AP+L +L+LKC KPKSL+++TP L   H  ++DA G+   EF  L+ L+L  P +Y LI
Subjt:  PHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI

Query:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE-GLDGRIGMRDLKKLHASLET---YKIELKLPFIIPILEK
        +  S    IK+L +++++  E  E ++L L T+ + FP ++ L L P   S+ ET +Q++ GL    G   LK++ A ++      +   + FI  I+ K
Subjt:  TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE-GLDGRIGMRDLKKLHASLET---YKIELKLPFIIPILEK

Query:  CTDSLDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPW
             DM L+I+++ D  +   ++S   +++PR +W+W +W EG ++ W
Subjt:  CTDSLDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEGLKEPW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGATCTTCCGCCTTCGTTAGTTCTCGAAATCCTGAATCGACTGGCCGATTCCGCCGATTTGGCTCGGTGTCGTGTGGCTTCCAAATCTCTTAATGTTCTTTCTCG
TGAGGTTAGGTCAGTGAACCTCTTTTGTTCATTGGATCGATATCTCAAGTCTAGGGCTGTGGAGACGAGGTTGTTAGTAATGCCTTTCAAGGTCATATTGAAGAGTCTGA
TGAACGATTTTGTGGCTCTTGATTCTGTGTCGATCGGTGTGGAGAAGTCACTTGGACGGATTTCGTATGAGCACGACGATGTTGAGGATTGGTCTGATGACTTGTTCTTG
ACGGATGTTGGTTTCGCTAGGGAATGGCTGCCGGCGATTGGTAGAGGTTTGACTTCCTTGTCGATAGTGGATTTTTGGGTTCAATCATGCTGGAGGCAATCGAAGATTTT
GGCGCTAATTACTTTATGCTGTGGCAATCTTCAGGAACTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGTCTGAATAGATTGAATTCCCTCAAGTGTCTGACCCTAG
AATTTATAAGATTAGATGATGAAGATCTGAGCGAGGTTAACTATAACTTCCCTCATCTTGAAATTCTTAATTTGATAGGGGTTGGGGGCCTAAATGAACCAAAAATTCAT
CTGTCACACCTTAAAACCTGTCGATGGACAGTGTCAAATGCTCCAGTTTCTCTGAGCATATGTGCACCAAGCCTATCAAAACTTGAACTGAAGTGTGTCAAACCAAAATC
TCTTATTATCCAAACTCCCATGCTATCTGATTTTCATTTTTGTCTACAAGATGCAAGTGGGTTACAAGTTAATGAATTCCCTTGCTTGAGAAAGCTTCAGCTTCATTTTC
CGTGTCTTTACAGTCTCATCACAACATTTTCATCTGCAAGAACTATAAAGGAACTCACTCTCAATACAATGCAACGTGCTGAATCTGTTGAATCTGTTAAGCTTTGCCTT
GATACACTGTTTGAAATATTTCCAAATCTTAGCTTTCTTAAATTGGGTCCAGGAGTTTTGTCAGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGATGGACGGATAGG
GATGAGAGATTTGAAAAAGCTTCATGCTAGCCTTGAAACCTACAAGATTGAGTTAAAACTTCCATTTATCATTCCCATTTTGGAAAAATGTACCGACTCCCTCGATATGG
AATTGCTCATCTATCGCAATGCCGATTCTCACCTTGCTGGTGGAATCATGTCAAAACGTGCAGTTAATCATCCAAGACCAAAATGGAGATGGGAACTGTGGAAGGAAGGA
TTAAAAGAACCGTGGGCTAAAGGGCATTTAAGCTGTCAAGTGTAA

mRNA sequence

Show/hide mRNA sequence

TTGTTCGTTAATCGCAATGATTCAATCTCACCGCCAACGAAGAGATGCGTGAATTTATCGCCACAAATTCACAAAATTCATAAACGTTCTTCTGTTTTTCGCCATGGATG
ATCTTCCGCCTTCGTTAGTTCTCGAAATCCTGAATCGACTGGCCGATTCCGCCGATTTGGCTCGGTGTCGTGTGGCTTCCAAATCTCTTAATGTTCTTTCTCGTGAGGTT
AGGTCAGTGAACCTCTTTTGTTCATTGGATCGATATCTCAAGTCTAGGGCTGTGGAGACGAGGTTGTTAGTAATGCCTTTCAAGGTCATATTGAAGAGTCTGATGAACGA
TTTTGTGGCTCTTGATTCTGTGTCGATCGGTGTGGAGAAGTCACTTGGACGGATTTCGTATGAGCACGACGATGTTGAGGATTGGTCTGATGACTTGTTCTTGACGGATG
TTGGTTTCGCTAGGGAATGGCTGCCGGCGATTGGTAGAGGTTTGACTTCCTTGTCGATAGTGGATTTTTGGGTTCAATCATGCTGGAGGCAATCGAAGATTTTGGCGCTA
ATTACTTTATGCTGTGGCAATCTTCAGGAACTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGTCTGAATAGATTGAATTCCCTCAAGTGTCTGACCCTAGAATTTAT
AAGATTAGATGATGAAGATCTGAGCGAGGTTAACTATAACTTCCCTCATCTTGAAATTCTTAATTTGATAGGGGTTGGGGGCCTAAATGAACCAAAAATTCATCTGTCAC
ACCTTAAAACCTGTCGATGGACAGTGTCAAATGCTCCAGTTTCTCTGAGCATATGTGCACCAAGCCTATCAAAACTTGAACTGAAGTGTGTCAAACCAAAATCTCTTATT
ATCCAAACTCCCATGCTATCTGATTTTCATTTTTGTCTACAAGATGCAAGTGGGTTACAAGTTAATGAATTCCCTTGCTTGAGAAAGCTTCAGCTTCATTTTCCGTGTCT
TTACAGTCTCATCACAACATTTTCATCTGCAAGAACTATAAAGGAACTCACTCTCAATACAATGCAACGTGCTGAATCTGTTGAATCTGTTAAGCTTTGCCTTGATACAC
TGTTTGAAATATTTCCAAATCTTAGCTTTCTTAAATTGGGTCCAGGAGTTTTGTCAGAAGCCGAGACTTGTTATCAAGCTGAAGGTTTGGATGGACGGATAGGGATGAGA
GATTTGAAAAAGCTTCATGCTAGCCTTGAAACCTACAAGATTGAGTTAAAACTTCCATTTATCATTCCCATTTTGGAAAAATGTACCGACTCCCTCGATATGGAATTGCT
CATCTATCGCAATGCCGATTCTCACCTTGCTGGTGGAATCATGTCAAAACGTGCAGTTAATCATCCAAGACCAAAATGGAGATGGGAACTGTGGAAGGAAGGATTAAAAG
AACCGTGGGCTAAAGGGCATTTAAGCTGTCAAGTGTAATTGTCATAGTGGTGGGACAAACTCTTGCTCCTGAAGGTGCAAAGCTTCAAAAGAGGCAAATCCATGTCATTT
AAAAACTAAGCCTACCCATCTTTTGAAATTGGCAGACTTATGGGGGTTCTAAAGAACGCCAAAGAACTCAGTAGATCAATGGATGACCCAAAAGCAATCCTACATATGAT
ACCAGGTCTATAAAATTACTTTTTTGATCTTTTATGTTCAGATCTTTGCTCGAAGTCTCCTGTTGATACTTGGTTCGAGAAAAACTGTTGCTGCTGCTGCTGCTGAGCAA
TTTGAAAAAAGGTGACAGAGCTGGTATTAATTAGATGGTTACACTGCTCATGAAGTCAAGTCACTTTGCCAGAGTTTCAGGTTGCTGTGAGCTCCACCCTTTCGATCAAC
CTGGTGCAGCTGTAGAGGGAAGAGATAGGAGTAATCAGATACGTTGACACTGCTCATGATGTCAAATTGTCATGCTGGTTCAGAAATTTTAAGTTCCTGGGTAGGCCAGC
CCCTCCATCAATCCAAACACAAAAGGGTTTCATTATTATCATTAAAAGTATTATAATTCAATAGGAATCAGAGATTCGAACCTATGATTCATATGAGATGAGAATGGGAC
TTCTTCATATCGACAGTTAGTTCTCAATTGTCTATTGTCTACACGATACCTCATTCTGTTCTTGTTGACAGATATCATACTGTTTGATTTCACCAAAGGAGAAATAAGAA
ATGATACGAGAACAAGAGAGAGGAACATGAATATGAAT

Protein sequence

Show/hide protein sequence

MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETRLLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFL
TDVGFAREWLPAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKCLTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIH
LSHLKTCRWTVSNAPVSLSICAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLITTFSSARTIKELTLNTMQRAESVESVKLCL
DTLFEIFPNLSFLKLGPGVLSEAETCYQAEGLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIMSKRAVNHPRPKWRWELWKEG
LKEPWAKGHLSCQV

CmoCh18G008410 (gene) of Cucurbita moschata (Rifu) v1 genome