; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G008950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G008950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:10196777..10199214
RNA-Seq ExpressionCmoCh18G008950
SyntenyCmoCh18G008950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012900.1 hypothetical protein SDJN02_25653 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-4295.83Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSE
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG  + E
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSE
XP_022139281.1 uncharacterized protein LOC111010237 [Momordica charantia]3.0e-3983Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCGACLSE+EE+
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
XP_022945676.1 uncharacterized protein LOC111449839 [Cucurbita moschata]2.7e-48100Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
XP_022967037.1 uncharacterized protein LOC111466560 [Cucurbita maxima]3.9e-4798Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDAD ETSGKSSS+SFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
XP_023541224.1 uncharacterized protein LOC111801454 [Cucurbita pepo subsp. pepo]6.3e-4596.04Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQK-HQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEE
        MHLWPSTRIRDSFKSAYIQ LEWN HRMKIQK  QQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEE
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQK-HQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEE

Query:  N
        N
Subjt:  N
TrEMBL top hitse value%identityAlignment
A0A0A0KRM0 Uncharacterized protein3.6e-3080.43Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQKH Q QSSSKQNLLDK+++SD AD ETS  S SVSFG RVLEF SE+  LLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG
A0A5A7SU31 Uncharacterized protein3.3e-3182.61Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQKH Q QSSSKQNLLDK+  SD ADGETS +S SVSFG RVLEF SE+L LLSCCYCCYCCG
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSD-ADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCG
A0A6J1CC78 uncharacterized protein LOC1110102371.5e-3983Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
        MHLWPSTRIRDSFK AYI+KLEWN+HRMKIQK QQQQSSSKQNLLDK+Q+SDADGET+  ++ VSFG RVL+FCSE LLLLSCCYCCYCCGACLSE+EE+
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
A0A6J1G1K0 uncharacterized protein LOC1114498391.3e-48100Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
A0A6J1HPM3 uncharacterized protein LOC1114665601.9e-4798Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
        MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDAD ETSGKSSS+SFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G49015.1 Expressed protein2.3e-1341.84Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEE
        MHLWPS ++R+SFKS               QK  Q+ +S KQ+  ++Q+  D D E+   S  +S G      C +V ++LSCCYCC+CCGAC+ EEE
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEE
AT5G49015.2 Expressed protein2.3e-1341.84Show/hide
Query:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEE
        MHLWPS ++R+SFKS               QK  Q+ +S KQ+  ++Q+  D D E+   S  +S G      C +V ++LSCCYCC+CCGAC+ EEE
Subjt:  MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTGTGGCCATCGACGAGGATCAGAGACTCTTTCAAGAGTGCTTATATCCAAAAGCTGGAATGGAACATCCACAGAATGAAAATCCAGAAGCACCAGCAG
CAGCAATCTTCGAGCAAACAGAACTTGTTGGATAAACAACAATCTTCTGATGCCGATGGCGAAACTTCAGGGAAATCCAGTTCAGTTTCCTTTGGTCATCGAGTT
CTTGAATTCTGCTCTGAAGTTCTCCTGCTTCTCTCCTGTTGTTATTGTTGCTATTGCTGTGGAGCTTGCCTCTCCGAAGAAGAAGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
TTTCCCTCCCCACCTTCCTTCTCTGTTAAAGCCCCGTCGGTTCCGCGACTTTTCTTATTTCCTCCCTCCCAGCGCCGGCGATTCTCCACATCGTTCTTCATCTAA
CTCGAGAGGCAAAGATGCATCTGTGGCCATCGACGAGGATCAGAGACTCTTTCAAGAGTGCTTATATCCAAAAGCTGGAATGGAACATCCACAGAATGAAAATCC
AGAAGCACCAGCAGCAGCAATCTTCGAGCAAACAGAACTTGTTGGATAAACAACAATCTTCTGATGCCGATGGCGAAACTTCAGGGAAATCCAGTTCAGTTTCCT
TTGGTCATCGAGTTCTTGAATTCTGCTCTGAAGTTCTCCTGCTTCTCTCCTGTTGTTATTGTTGCTATTGCTGTGGAGCTTGCCTCTCCGAAGAAGAAGAAAATT
GATGCTGAAGTTAAGGATAGATGCTTGGAATTGATAAAGGCAACTAATTGATGCAGATGATATTTTCAGTATCTGTACTGGAGCCTCGTCATGAACAGGTAATAT
CGATGATCATTGGCATATATTGATCTCTTTGTACAGTCAACTTGGATTTGGATGCTGGACAGTTTGATATGTGGATTTGTTTATTTTAGGCTACACATTTGTAAG
TACCAACACTATTTATTGACTTTTTCGGACCATACCCAAACTTAGATTTTTATTACCTGTTCACTTTTACCATCGAAAAC
Protein sequenceShow/hide protein sequence
MHLWPSTRIRDSFKSAYIQKLEWNIHRMKIQKHQQQQSSSKQNLLDKQQSSDADGETSGKSSSVSFGHRVLEFCSEVLLLLSCCYCCYCCGACLSEEEEN