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CmoCh18G009100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G009100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:10293951..10294322
RNA-Seq ExpressionCmoCh18G009100
SyntenyCmoCh18G009100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648853.1 hypothetical protein Csa_008932 [Cucumis sativus]2.3e-0444.57Show/hide
Query:  LAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSGSAI--FMSPTSNDFVAFEVPNGMD-AKPPMSNRVIRSCKPKGRMRYS
        LA+ S+S+    S  ++    T T        P+ SEA  V G GS++   M P+  DFVAFEVP+ +  A PPM + +IRSCKPKGRMR S
Subjt:  LAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSGSAI--FMSPTSNDFVAFEVPNGMD-AKPPMSNRVIRSCKPKGRMRYS
KAG6573847.1 hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sororia]3.7e-5598.37Show/hide
Query:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSGSAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRM
        MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPST EA TVVGSGSAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRM
Subjt:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSGSAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRM

Query:  RYSAPSDRRNSLPLVSIVCSNMS
        RYSAPSDRRNSLPLVSIVCSNMS
Subjt:  RYSAPSDRRNSLPLVSIVCSNMS
KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0657.14Show/hide
Query:  PTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRMRYSAPSDRRNSLPL
        PTSNDF    +PNG  A PPM    +RSCKPKG +R+S+PS  RN+LP+
Subjt:  PTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRMRYSAPSDRRNSLPL
TYK09256.1 hypothetical protein E5676_scaffold475G002500 [Cucumis melo var. makuwa]1.2e-1653.23Show/hide
Query:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSG-SAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGR
        MATSRAML +  +    +S  +P+ +   V   PS         S+P  SEA  V G G S+  M P+  DFVAFEVP+ + A PP  + +IRSCKPKGR
Subjt:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSG-SAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGR

Query:  MRYSAPSDRRNSLPLVSIVCSNMS
        MRYSAPSDRRNS PL+SIVCSNMS
Subjt:  MRYSAPSDRRNSLPLVSIVCSNMS
TrEMBL top hitse value%identityAlignment
A0A0A0KRI3 Uncharacterized protein2.1e-1652.34Show/hide
Query:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGEST--PSTSEAMTVVGSGSAI--FMSPTSNDFVAFEVPNGMD-AKPPMSNRVIRSCK
        MATSRAML +                     PTP     T D + +  P+ SEA  V G GS++   M P+  DFVAFEVP+ +  A PPM + +IRSCK
Subjt:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGEST--PSTSEAMTVVGSGSAI--FMSPTSNDFVAFEVPNGMD-AKPPMSNRVIRSCK

Query:  PKGRMRYSAPSDRRNSLPLVSIVCSNMS
        PKGRMRYSAPSDRRNS PLVSIVCSNMS
Subjt:  PKGRMRYSAPSDRRNSLPLVSIVCSNMS
A0A5D3CFX3 Uncharacterized protein5.6e-1753.23Show/hide
Query:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSG-SAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGR
        MATSRAML +  +    +S  +P+ +   V   PS         S+P  SEA  V G G S+  M P+  DFVAFEVP+ + A PP  + +IRSCKPKGR
Subjt:  MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSG-SAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGR

Query:  MRYSAPSDRRNSLPLVSIVCSNMS
        MRYSAPSDRRNS PL+SIVCSNMS
Subjt:  MRYSAPSDRRNSLPLVSIVCSNMS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGTCACGAGCCATGCTTAACGTAGTATCGAGTGATCTAGCCATGATATCGAATTCTTCACCTTCTACTGTCTCGTTCCCAGTAATTCCTACTCCGTCCACATC
TACAACCACGTTCGATGGAGAATCTACACCATCAACATCTGAAGCTATGACCGTGGTAGGATCTGGTTCGGCGATTTTCATGTCTCCGACTTCTAATGACTTTGTTGCTT
TTGAGGTCCCAAATGGTATGGATGCAAAGCCACCAATGTCCAACCGGGTTATTCGGAGTTGTAAACCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGGAAT
AGCCTGCCTCTTGTTTCGATTGTATGCTCAAACATGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGTCACGAGCCATGCTTAACGTAGTATCGAGTGATCTAGCCATGATATCGAATTCTTCACCTTCTACTGTCTCGTTCCCAGTAATTCCTACTCCGTCCACATC
TACAACCACGTTCGATGGAGAATCTACACCATCAACATCTGAAGCTATGACCGTGGTAGGATCTGGTTCGGCGATTTTCATGTCTCCGACTTCTAATGACTTTGTTGCTT
TTGAGGTCCCAAATGGTATGGATGCAAAGCCACCAATGTCCAACCGGGTTATTCGGAGTTGTAAACCTAAAGGTCGAATGAGGTATTCTGCTCCCAGTGATCGTAGGAAT
AGCCTGCCTCTTGTTTCGATTGTATGCTCAAACATGTCATGA
Protein sequenceShow/hide protein sequence
MATSRAMLNVVSSDLAMISNSSPSTVSFPVIPTPSTSTTTFDGESTPSTSEAMTVVGSGSAIFMSPTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRMRYSAPSDRRN
SLPLVSIVCSNMS