; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G009130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G009130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich RNA-binding protein RZ1C-like
Genome locationCmo_Chr18:10310328..10315911
RNA-Seq ExpressionCmoCh18G009130
SyntenyCmoCh18G009130
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573850.1 Glycine-rich RNA-binding protein RZ1B, partial [Cucurbita argyrosperma subsp. sororia]8.0e-19399.41Show/hide
Query:  MAVDFRCIYTHFFIGDAPVLQESLEGNEGSFFEDISHYTARTRRSFLKYGVDMAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDS--QIMLEKNTGR
        MAVDFRCIYTHFFIGDAPVLQESLEGNEGSFFEDISHYTARTRRSFLKYGVDMAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDS  QIMLEKNTGR
Subjt:  MAVDFRCIYTHFFIGDAPVLQESLEGNEGSFFEDISHYTARTRRSFLKYGVDMAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDS--QIMLEKNTGR

Query:  PRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRG
        PRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRG
Subjt:  PRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRG

Query:  GDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV
        GDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV
Subjt:  GDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV

Query:  DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

XP_022945121.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata]1.2e-161100Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
        SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD

Query:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

XP_022966702.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita maxima]2.6e-15999.3Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
        SSGGRDSSY GGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDS+YGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD

Query:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

XP_023541916.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita pepo subsp. pepo]8.9e-16099.65Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
        SSGGRDSSY GGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD

Query:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

XP_038892830.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]3.4e-14390.97Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSW+ITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSR--DKYG
        S+GGR S  GGGGGGDRSARQDECFKCGR GHWARDCP VGGGRGRGGDSFL+R RLGDSD GDRFAGDNNRYVDDRYEGGGR GDRDRFDSS   +KYG
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSR--DKYG

Query:  SRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        SRDRYVS+RYPP GDRFGSSRYNNDS RFPVN +GKDRGYYRDGGPRGVDKY S GPARNEGRSYRNRPAPYDRPSR  GRPSSFDRY
Subjt:  SRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

TrEMBL top hitse value%identityAlignment
A0A1S3BGN5 glycine-rich RNA-binding protein RZ1C-like isoform X13.5e-13889.24Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSW+ITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSR--DKYG
        S+GGR S   GGGGGDRSARQDECFKCGR GHWARDCP VGGGRGRGGDSFL+R RLGD D GDRFAGD NRYVDDRYEGGGR GDRDRFDSS   +KYG
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSR--DKYG

Query:  SRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        SRDRYVSDRYPP GDRFGS RYNNDS RFPVN +GKDRGYYRD GPRGVDKY S GPAR+EGRSYRNRPAPYDRPSR  GRPSSFDRY
Subjt:  SRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

A0A5D3CG30 Glycine-rich RNA-binding protein RZ1C-like isoform X13.5e-13889.24Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSW+ITERQLENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSR--DKYG
        S+GGR S   GGGGGDRSARQDECFKCGR GHWARDCP VGGGRGRGGDSFL+R RLGD D GDRFAGD NRYVDDRYEGGGR GDRDRFDSS   +KYG
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSR--DKYG

Query:  SRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        SRDRYVSDRYPP GDRFGS RYNNDS RFPVN +GKDRGYYRD GPRGVDKY S GPAR+EGRSYRNRPAPYDRPSR  GRPSSFDRY
Subjt:  SRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

A0A6J1FZZ1 glycine-rich RNA-binding protein RZ1C-like isoform X16.0e-162100Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
        SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD

Query:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

A0A6J1G022 glycine-rich RNA-binding protein RZ1C-like isoform X27.1e-139100Show/hide
Query:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP
        MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP
Subjt:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP

Query:  VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYY
        VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYY
Subjt:  VGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYY

Query:  RDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  RDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

A0A6J1HNQ1 glycine-rich RNA-binding protein RZ1C-like isoform X11.3e-15999.3Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGY

Query:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
        SSGGRDSSY GGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDS+YGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD
Subjt:  SSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRD

Query:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
Subjt:  RYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B6.8e-7052.84Show/hide
Query:  GRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSW++TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS
Subjt:  GRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYS

Query:  SGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSD-----YGDR-------FAGDNNRYVDDRYE-GGGRLGDRD
        S G+ +             +DECFKC RPGHWARDCP  G  R R       R R+GD D     YGDR          + +RY+D R +  GGR   RD
Subjt:  SGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSD-----YGDR-------FAGDNNRYVDDRYE-GGGRLGDRD

Query:  RFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV-DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RFDS  DKY  RD Y  +RY P GDRF S RY            G++R Y RD   R   D+Y   GP R+EGR YR+RP PYDRPSR  GRPSS++R+
Subjt:  RFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV-DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

P49310 Glycine-rich RNA-binding protein GRP1A1.3e-2347.33Show/hide
Query:  MAGRD-EYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYR--G
        MA  D EYR FVGGL+W   +R LE AFS++G+++DS+I+ ++ TGR RGFGF+TF D + M DAI  M+GQ+   R I+VN+A+ + G     G R  G
Subjt:  MAGRD-EYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYR--G

Query:  GGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGG
        GGY SGG    YGGGGGG     ++  +  G  G+ +R    GGG G GG
Subjt:  GGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGG

P49311 Glycine-rich RNA-binding protein GRP2A1.5e-2448Show/hide
Query:  MAGRD-EYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYR--G
        MA  D EYR FVGGL+W   ER LE AFS+FG+++DS+I+ ++ TGR RGFGF+TF D + M DAI  M+GQ+   R I+VN+A+ + G     G R  G
Subjt:  MAGRD-EYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYR--G

Query:  GGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGG
        GGY  GG    YGGGGGG    R++     G  G ++     GGG G GG
Subjt:  GGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C5.0e-7355.13Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG
        MA ++  RIFVGGLS E+T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG

Query:  ---GYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRL--GDSDYGDRFAG-----DNNRYVDDRYEGGGRLGDRD
           GYS  G+  S+GGGGGG     +DECFKCGR GHWARDCP  GGGRG     F SR     G     DR+A      D  RY+DDRY+G  R G RD
Subjt:  ---GYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRL--GDSDYGDRFAG-----DNNRYVDDRYEGGGRLGDRD

Query:  RFDSSRDKYGSRDRYVSDRYPPSGDRF-GSSRYNNDSGRFPVNSFGKDRGYYRDGGP-RGVDKY---ESSGPAR---NEGRSYRNRP-APYDRPSRAAG-
        RFD SR+ Y  RDRY SDRY    DRF G  RY+  S R+P  S+ K R + RD  P  G D+Y    + GP R    EGR +R+R  APY+RPSR+ G 
Subjt:  RFDSSRDKYGSRDRYVSDRYPPSGDRF-GSSRYNNDSGRFPVNSFGKDRGYYRDGGP-RGVDKY---ESSGPAR---NEGRSYRNRP-APYDRPSRAAG-

Query:  ----RPSSFDRY
              S+FDRY
Subjt:  ----RPSSFDRY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A2.7e-3439.44Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G 
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGY

Query:  RGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRY--VDDRYEGGGRLGDRDRFDSSR
        R  GY    R    GG GGGD       CFKCG+PGH+AR+CP    R  GG       R    D  DR++  ++RY   DDRY         DR+ +  
Subjt:  RGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRY--VDDRYEGGGRLGDRDRFDSSR

Query:  DKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAG
        D+Y S+D    DRY    DR+G SR    S   P  S  +  G  RDGG RG    E            R+  APYDRP RA G
Subjt:  DKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain4.8e-7152.84Show/hide
Query:  GRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSW++TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS
Subjt:  GRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYS

Query:  SGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSD-----YGDR-------FAGDNNRYVDDRYE-GGGRLGDRD
        S G+ +             +DECFKC RPGHWARDCP  G  R R       R R+GD D     YGDR          + +RY+D R +  GGR   RD
Subjt:  SGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSD-----YGDR-------FAGDNNRYVDDRYE-GGGRLGDRD

Query:  RFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV-DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RFDS  DKY  RD Y  +RY P GDRF S RY            G++R Y RD   R   D+Y   GP R+EGR YR+RP PYDRPSR  GRPSS++R+
Subjt:  RFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV-DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain4.8e-7152.84Show/hide
Query:  GRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSW++TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G ++ISVNKAEPK+ GED+D   +GGGYS
Subjt:  GRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYS

Query:  SGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSD-----YGDR-------FAGDNNRYVDDRYE-GGGRLGDRD
        S G+ +             +DECFKC RPGHWARDCP  G  R R       R R+GD D     YGDR          + +RY+D R +  GGR   RD
Subjt:  SGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRLGDSD-----YGDR-------FAGDNNRYVDDRYE-GGGRLGDRD

Query:  RFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV-DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY
        RFDS  DKY  RD Y  +RY P GDRF S RY            G++R Y RD   R   D+Y   GP R+EGR YR+RP PYDRPSR  GRPSS++R+
Subjt:  RFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGV-DKYESSGPARNEGRSYRNRPAPYDRPSRAAGRPSSFDRY

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.9e-3539.44Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G 
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGY

Query:  RGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRY--VDDRYEGGGRLGDRDRFDSSR
        R  GY    R    GG GGGD       CFKCG+PGH+AR+CP    R  GG       R    D  DR++  ++RY   DDRY         DR+ +  
Subjt:  RGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRY--VDDRYEGGGRLGDRDRFDSSR

Query:  DKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAG
        D+Y S+D    DRY    DR+G SR    S   P  S  +  G  RDGG RG    E            R+  APYDRP RA G
Subjt:  DKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAG

AT4G39260.1 cold, circadian rhythm, and RNA binding 19.8e-2441.01Show/hide
Query:  EYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPK--MGEDMDHGYRGGGYSSG
        EYR FVGGL+W   +  L+  FS+FG +IDS+I+ ++ +GR RGFGF+TF D + M DAI EM+G+E   R+I+VN+A+ +   G     G  GGGY SG
Subjt:  EYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPK--MGEDMDHGYRGGGYSSG

Query:  GRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGG
        G     GGGGGG            G  G+  R    G G G GG  +    R     YG    GD   Y      GGG
Subjt:  GRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGDNNRYVDDRYEGGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.6e-7455.13Show/hide
Query:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG
        MA ++  RIFVGGLS E+T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG
Subjt:  MAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG

Query:  ---GYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRL--GDSDYGDRFAG-----DNNRYVDDRYEGGGRLGDRD
           GYS  G+  S+GGGGGG     +DECFKCGR GHWARDCP  GGGRG     F SR     G     DR+A      D  RY+DDRY+G  R G RD
Subjt:  ---GYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCP-VGGGRGRGGDSFLSRPRL--GDSDYGDRFAG-----DNNRYVDDRYEGGGRLGDRD

Query:  RFDSSRDKYGSRDRYVSDRYPPSGDRF-GSSRYNNDSGRFPVNSFGKDRGYYRDGGP-RGVDKY---ESSGPAR---NEGRSYRNRP-APYDRPSRAAG-
        RFD SR+ Y  RDRY SDRY    DRF G  RY+  S R+P  S+ K R + RD  P  G D+Y    + GP R    EGR +R+R  APY+RPSR+ G 
Subjt:  RFDSSRDKYGSRDRYVSDRYPPSGDRF-GSSRYNNDSGRFPVNSFGKDRGYYRDGGP-RGVDKY---ESSGPAR---NEGRSYRNRP-APYDRPSRAAG-

Query:  ----RPSSFDRY
              S+FDRY
Subjt:  ----RPSSFDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGACTTCCGATGCATATATACTCATTTTTTCATCGGCGACGCGCCGGTTCTTCAGGAATCTCTAGAAGGAAACGAGGGTTCATTCTTTGAGGATATTTCACA
CTACACAGCACGAACAAGGAGGAGTTTTCTGAAATACGGTGTTGATATGGCTGGGAGAGATGAGTACCGAATATTTGTGGGTGGGTTATCGTGGGAAATCACGGAGCGTC
AGCTTGAGAATGCCTTCAGTCGATTCGGAAAGATTATCGATTCTCAGATCATGTTGGAAAAAAATACAGGGCGCCCACGTGGCTTTGGGTTTATCACGTTTTCAGATCGA
CGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCACGGTTA
CAGGGGGGGAGGCTACTCAAGTGGTGGCAGGGATAGCAGCTATGGTGGTGGAGGAGGAGGAGATAGATCTGCTAGGCAAGATGAATGCTTCAAATGTGGACGTCCTGGAC
ACTGGGCCAGAGATTGTCCTGTGGGCGGTGGTCGAGGAAGGGGAGGAGACTCATTTCTTTCACGTCCTCGACTTGGGGATAGCGATTATGGGGATCGCTTTGCTGGAGAT
AATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGACGCCTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGACAAATATGGGAGTCGCGATCGCTATGTTAGTGA
CAGGTACCCACCTAGCGGAGACCGCTTTGGAAGCAGTAGGTACAACAACGACTCTGGTCGATTTCCCGTAAACAGCTTTGGTAAAGATAGGGGCTATTATAGAGATGGTG
GACCTCGTGGGGTTGATAAGTACGAAAGCAGCGGTCCAGCACGCAACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTACGATCGCCCTAGCAGAGCAGCAGGGAGG
CCATCATCATTTGATCGTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCGACTTCCGATGCATATATACTCATTTTTTCATCGGCGACGCGCCGGTTCTTCAGGAATCTCTAGAAGGAAACGAGGGTTCATTCTTTGAGGATATTTCACA
CTACACAGCACGAACAAGGAGGAGTTTTCTGAAATACGGTGTTGATATGGCTGGGAGAGATGAGTACCGAATATTTGTGGGTGGGTTATCGTGGGAAATCACGGAGCGTC
AGCTTGAGAATGCCTTCAGTCGATTCGGAAAGATTATCGATTCTCAGATCATGTTGGAAAAAAATACAGGGCGCCCACGTGGCTTTGGGTTTATCACGTTTTCAGATCGA
CGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCACGGTTA
CAGGGGGGGAGGCTACTCAAGTGGTGGCAGGGATAGCAGCTATGGTGGTGGAGGAGGAGGAGATAGATCTGCTAGGCAAGATGAATGCTTCAAATGTGGACGTCCTGGAC
ACTGGGCCAGAGATTGTCCTGTGGGCGGTGGTCGAGGAAGGGGAGGAGACTCATTTCTTTCACGTCCTCGACTTGGGGATAGCGATTATGGGGATCGCTTTGCTGGAGAT
AATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGACGCCTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGACAAATATGGGAGTCGCGATCGCTATGTTAGTGA
CAGGTACCCACCTAGCGGAGACCGCTTTGGAAGCAGTAGGTACAACAACGACTCTGGTCGATTTCCCGTAAACAGCTTTGGTAAAGATAGGGGCTATTATAGAGATGGTG
GACCTCGTGGGGTTGATAAGTACGAAAGCAGCGGTCCAGCACGCAACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTACGATCGCCCTAGCAGAGCAGCAGGGAGG
CCATCATCATTTGATCGTTATTGAATGTTGACAGTTAGCAACATTATCAGTTTTATCTAGTAAGTACTACACGCACGGTGTCGTCGAACTTTTAGTCATCTAGGATATAT
AGTTACTGTACCATGGCCTGCCAGCTGATCGCTGCTGTTTCATCTTGCTTTCATGTATCTGATAATGGAAAGAGAACTGATTTAAGTTGACCCTGAAATGTTGAGCCGAA
TCTTCGAGGACTCGAAGCTCGTTCGATTCATAATATCCGTTAACGAATTAGGAAATTAGGAAATAGAAGTGTAGAAGTCAGAGGGCACCCTACATGAAAGGGGCATGAAT
GGCAGACCAGAAGTCTCCTCTCAGTTAAGAGTGGAAAGGTAAGAGAGGCCATTAATGGAAGAAAACTGGTATGGTTTGGCCCACAACTATTGGAATTGTCGACTTGCCTT
TAATCCATCCCCCACTGTCTTGACATGTACTTGCAATGGCACTATCTTCGTCGGCTCTTGTTCATGATTTACTTGACTTTAGTTTTTGTGGAAAAATTAGAGAAGAAAGT
GTAGTTTTTGATTGGTTGACTATAAAACCCACTTGCAATTTGGTGTCCTCCCATCC
Protein sequenceShow/hide protein sequence
MAVDFRCIYTHFFIGDAPVLQESLEGNEGSFFEDISHYTARTRRSFLKYGVDMAGRDEYRIFVGGLSWEITERQLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDR
RGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSSGGRDSSYGGGGGGDRSARQDECFKCGRPGHWARDCPVGGGRGRGGDSFLSRPRLGDSDYGDRFAGD
NNRYVDDRYEGGGRLGDRDRFDSSRDKYGSRDRYVSDRYPPSGDRFGSSRYNNDSGRFPVNSFGKDRGYYRDGGPRGVDKYESSGPARNEGRSYRNRPAPYDRPSRAAGR
PSSFDRY