; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G009390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G009390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRAB6-interacting golgin
Genome locationCmo_Chr18:10550381..10552843
RNA-Seq ExpressionCmoCh18G009390
SyntenyCmoCh18G009390
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573875.1 hypothetical protein SDJN03_27762, partial [Cucurbita argyrosperma subsp. sororia]1.7e-7698.77Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEE+AKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

XP_022945697.1 uncharacterized protein LOC111449848 isoform X1 [Cucurbita moschata]1.2e-77100Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

XP_022945698.1 uncharacterized protein LOC111449848 isoform X2 [Cucurbita moschata]9.8e-6499.28Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMEL
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLME+
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMEL

XP_022968566.1 uncharacterized protein LOC111467754 isoform X1 [Cucurbita maxima]7.2e-7596.91Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKH DEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

XP_023542304.1 uncharacterized protein LOC111802239 isoform X1 [Cucurbita pepo subsp. pepo]1.9e-7597.53Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKH DEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQ REEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLL TLMELLDQSERWRMNKLEELSKH+ALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

TrEMBL top hitse value%identityAlignment
A0A6J1G1M5 RAB6-interacting golgin4.7e-6499.28Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMEL
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLME+
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMEL

A0A6J1G1N1 RAB6-interacting golgin5.8e-78100Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

A0A6J1G1P6 RAB6-interacting golgin3.5e-5983.33Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKK                           LLDQSERWRMNKLEELSKHIALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

A0A6J1HTV1 RAB6-interacting golgin1.3e-6196.4Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKH DEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMEL
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLME+
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMEL

A0A6J1HV92 RAB6-interacting golgin3.5e-7596.91Show/hide
Query:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
        MTSKH DEGNGERIVSEGSRGRD+ GEMGK+LTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE
Subjt:  MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKE

Query:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN
        LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEEL+KHIALTN
Subjt:  LKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.2 Family of unknown function (DUF662)1.2e-3260.8Show/hide
Query:  VSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLL
        +S  +A+E+EIE+R+MEV+E+++ QL R E+E KRL+ I EELE M DPM KEV  VRK+ID+  KELK LG   QKKE+EYKE L+ FNEK  EK QL+
Subjt:  VSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLL

Query:  TTLMELLDQSERWRMNKLEELSKHI
        T LMEL+ +SE+ RM KLEELSK I
Subjt:  TTLMELLDQSERWRMNKLEELSKHI

AT2G36410.3 Family of unknown function (DUF662)1.8e-3160Show/hide
Query:  VSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLL
        +S  +A+E+EIE+R+MEV+E+++ QL R E+E KRL+ I EELE M DPM KEV  VRK+ID+  KELK LG   QKK  EYKE L+ FNEK  EK QL+
Subjt:  VSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKAQLL

Query:  TTLMELLDQSERWRMNKLEELSKHI
        T LMEL+ +SE+ RM KLEELSK I
Subjt:  TTLMELLDQSERWRMNKLEELSKHI

AT3G09980.1 Family of unknown function (DUF662)2.3e-3461.72Show/hide
Query:  KLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKA
        +  +S  +A+EEEIE++KME++E+V+ QL R EEE KRLA I EELE + DPM KEV  VRK+ID+  KELK LG   QKKE+EYKE LE FNEK  EK 
Subjt:  KLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKA

Query:  QLLTTLMELLDQSERWRMNKLEELSKHI
        QL+T LMEL+ +SE+ RM KLEELSK+I
Subjt:  QLLTTLMELLDQSERWRMNKLEELSKHI

AT3G52900.1 Family of unknown function (DUF662)1.7e-3462.5Show/hide
Query:  KLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKA
        K+ V+  QAREEEIER+KM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG VRK+ID A +++KSL Q CQKKEKEYK+ LE FNEK  EKA
Subjt:  KLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKEYKEVLEIFNEKTNEKA

Query:  QLLTTLMELLDQSERWRMNKLEELSKHI
         L++ LMELL +SER R+ KLEE++K +
Subjt:  QLLTTLMELLDQSERWRMNKLEELSKHI

AT3G52920.2 Family of unknown function (DUF662)3.6e-3255.56Show/hide
Query:  VSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKE
        +S  S+   +  EM +   +S  +A+E+EIE+RKMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+  KELK LG   QKKE+E
Subjt:  VSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQKKEKE

Query:  YKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHI
        YKE L+ FNEK  EK QL+T LMEL+ +SE+ R+ KL+ELS+ I
Subjt:  YKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTAAGCACAGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGCGGTCGAGACGATGGCGGTGAGATGGGGAAGAAACTGACCGTATCGACATT
GCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTTAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAAGAAGCTAAACGCTTAGCACAAATTTGGG
AAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAAGTTGGTAATGTGAGAAAAAGAATAGACACAGCTAAGAAGGAACTGAAATCACTGGGACAGATCTGCCAAAAG
AAGGAAAAAGAATATAAAGAAGTCTTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTCATGGAGCTGCTGGATCAAAGTGAGAGATGGAG
GATGAACAAGCTTGAAGAATTGAGTAAGCACATAGCATTGACGAACTGA
mRNA sequenceShow/hide mRNA sequence
AGCGTATTGTTTCAGACATTTTCCAAGAAAACCAACTTGTAGTTACAGAGAGGGAAATGGAAAGAAAGTTTTAAAGCAAAAGCAAAAGGCGAAAAGCTCAGCTCATCTAA
AGGCATTCAACCATCTGTATAAAGAAGAAGTGTGCTTGCTTGCTTGCTTGCTTTTGTAAGAGCTGCAAGGAAGGCCATTGATGAGGAGACGAAGCTCGTAAGAAACGAGA
GAGAGAATGACGAGTAAGCACAGAGACGAAGGAAATGGCGAGCGGATTGTATCGGAAGGAAGTCGCGGTCGAGACGATGGCGGTGAGATGGGGAAGAAACTGACCGTATC
GACATTGCAAGCTAGAGAAGAAGAGATTGAGAGGAGGAAGATGGAAGTTAAGGAGAAGGTTGAGTTGCAGTTAAGCCGTGCTGAGGAAGAAGCTAAACGCTTAGCACAAA
TTTGGGAAGAGCTGGAGGTAATGGGAGATCCAATGGGGAAAGAAGTTGGTAATGTGAGAAAAAGAATAGACACAGCTAAGAAGGAACTGAAATCACTGGGACAGATCTGC
CAAAAGAAGGAAAAAGAATATAAAGAAGTCTTGGAAATATTCAATGAAAAAACCAACGAGAAAGCTCAGCTACTCACTACACTCATGGAGCTGCTGGATCAAAGTGAGAG
ATGGAGGATGAACAAGCTTGAAGAATTGAGTAAGCACATAGCATTGACGAACTGATCGAGAAAATATGAATGGCTATCTATATTGTTGTCCATGAGTAGCACCTTCATTT
TTTCTGTTCTTGTTAAAATTGTACTTTTATTTAAAGAAATGTTTCAGAAAGTGTTAAAGATAAACATGCAGGCCATCCTCCATAACGTGTAATTAATATCAATAATATTA
TTAATCCTTCTATCATATCATAACATTTAATTTGGC
Protein sequenceShow/hide protein sequence
MTSKHRDEGNGERIVSEGSRGRDDGGEMGKKLTVSTLQAREEEIERRKMEVKEKVELQLSRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTAKKELKSLGQICQK
KEKEYKEVLEIFNEKTNEKAQLLTTLMELLDQSERWRMNKLEELSKHIALTN