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CmoCh18G009430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G009430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S acidic ribosomal protein P2-like
Genome locationCmo_Chr18:10569933..10571649
RNA-Seq ExpressionCmoCh18G009430
SyntenyCmoCh18G009430
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022945075.1 60S acidic ribosomal protein P2-2-like [Cucurbita moschata]4.1e-48100Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022968573.1 60S acidic ribosomal protein P2-2-like [Cucurbita maxima]1.2e-4799.13Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGA PAAEESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_023541212.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]9.1e-4899.13Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDE+IELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_038891319.1 60S acidic ribosomal protein P2-2-like [Benincasa hispida]9.7e-4289.57Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLK+ILGSVGAE+D+E+IELLLS+VKGKDVTELIASGREKLASVPSGGGA +A AA GGGGGG  APAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_042514341.1 60S acidic ribosomal protein P2-like [Macadamia integrifolia]5.7e-4286.96Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK++AAYLLAVLGGN+SPSA DLKNILGSVGA+ +D+KIELLLS VKGKD+TELIASGREKLASVPSGGGAA+AVAA  GGGGGGAAPAA+E KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A2N9HS84 Uncharacterized protein8.1e-4286.96Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK++AAYLLAVLGG ++PSA+DLK+ILGSVGAE DD+KIELLLS VKGKD+TELIASGREKLASVPSGGG A+AVAA GGGGGGGAAPAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1FZV9 60S acidic ribosomal protein P2-2-like2.0e-48100Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1GZ75 60S acidic ribosomal protein P2-1-like6.2e-4290.43Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAEVD++KIELL+SSVKGKD+TELIASGREKLASVPSGGGAA+AVAA  GGGGG AAPAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1HYE9 60S acidic ribosomal protein P2-2-like5.8e-4899.13Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGA PAAEESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like6.2e-4290.43Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAEVD++KIELL+SSVKGKD+TELIASGREKLASVPSGGGAA+AVAA  GGGGG AAPAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B4.3e-3270.43Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK++AAYLLAVLGGN+SP+A D+K+IL SVGAE D+EK+E LL+ +K KD+TE+IA+GRE+L+SVPSGGG A+ + A     GGGAAP AEE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESD+DMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P41099 60S acidic ribosomal protein P21.3e-3373.91Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK++AA+LLA+LGGN+SP+ +DLK+IL SVGA+ DD+KIELLLS VKGKD+TELIASGRE+LASVPSGGG A+A AAGGGGG   AA AAEE KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
          EESD+++GFSLFD
Subjt:  EKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A9.5e-3273.91Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK VAAYLLAVL GN+SPSA DL  IL SVG EVD+EK+ELLLS + GKD+TELIA+GREK ASVP GGG     AA      GGAAPAA E+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-13.5e-3475Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGAAPAAEESKKEEKV
        MK+VAA+LLAVL G +SP+  D+K+ILGSVGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA A  GGGGGG APAA ESKKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGAAPAAEESKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-21.6e-3472.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family1.1e-3572.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family1.1e-3572.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family1.1e-3572.17Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA+   GGGGG   +A ESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family2.5e-3575Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGAAPAAEESKKEEKV
        MK+VAA+LLAVL G +SP+  D+K+ILGSVGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA A  GGGGGG APAA ESKKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGAAPAAEESKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27720.3 60S acidic ribosomal protein family1.2e-3267.97Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKNILGS------------VGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGAA
        MK+VAA+LLAVL G +SP+  D+K+ILGS            VGAE +D +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA A  GGGGGG A
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKNILGS------------VGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVA-AGGGGGGGGAA

Query:  PAAEESKKEEKVEEKEESDDDMGFSLFD
        PAA ESKKEEK EEKEESDDDMGFSLF+
Subjt:  PAAEESKKEEKVEEKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCGTAGCTGCATATTTGCTCGCCGTCTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAAAATATTCTTGGATCTGTTGGAGCTGAAGTTGATGATGA
AAAAATCGAGCTTCTGTTGTCTAGCGTTAAGGGCAAGGATGTTACAGAGCTCATTGCTTCCGGAAGAGAAAAACTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCCATGG
CAGTTGCCGCTGGAGGCGGTGGGGGTGGTGGTGGTGCCGCCCCAGCTGCAGAAGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGATGATGACATGGGC
TTCAGTCTCTTCGATTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAACAAATCAGAAACCCTATCTTTCGCCACTATATAAGGTAATAAGAAGCAGTCAGCAACATCTACTGAACCCTAACTAAACTCTCTCTATCTCTCTCTCGTTCT
TTTGCGATTTGCTGTCTGCGAAGGATGAAGATCGTAGCTGCATATTTGCTCGCCGTCTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAAAATATTCTTGGATC
TGTTGGAGCTGAAGTTGATGATGAAAAAATCGAGCTTCTGTTGTCTAGCGTTAAGGGCAAGGATGTTACAGAGCTCATTGCTTCCGGAAGAGAAAAACTAGCATCTGTTC
CTTCTGGTGGAGGTGCTGCCATGGCAGTTGCCGCTGGAGGCGGTGGGGGTGGTGGTGGTGCCGCCCCAGCTGCAGAAGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAG
GAAGAATCAGATGATGACATGGGCTTCAGTCTCTTCGATTAAGTATAATTACAATGTCGAATGTTTTTGTTCAGAGAATTTTCAAGATTTTAGGTTGGATTTTTTGTTAT
TCACGTGTAGTTTCTTTTAACATTATCGTGGTGTTATGATGAGCCAAATGTTATATTTCGTTTCAGTTGATGAATTTCGTCGTTATTTTAAACATCTCGTGTTATATGAA
AAGAGGAATTGCCGCTATGTCATTAATTTGAATCTCCGAGGCCATTTTGATTTCTTCTCAGTGAAGACCGATCCCTCCCTAGGGGTATGGCTGGTAAATTTTCTGCCAAC
ATATTTTGATTAATAAAGTTAAATTTTAAATTTATTAGTATGAAAATTTTGTGTTGAATGCCTAAATATCTTGTTGCTGCGTGGAATCCTTTTCTTTTCTTTGGGATGTA
ATGATAAA
Protein sequenceShow/hide protein sequence
MKIVAAYLLAVLGGNSSPSAKDLKNILGSVGAEVDDEKIELLLSSVKGKDVTELIASGREKLASVPSGGGAAMAVAAGGGGGGGGAAPAAEESKKEEKVEEKEESDDDMG
FSLFD