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CmoCh18G009440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G009440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncopper transport protein ATX1-like
Genome locationCmo_Chr18:10574353..10576436
RNA-Seq ExpressionCmoCh18G009440
SyntenyCmoCh18G009440
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573880.1 Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4694.7Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP  APAPAAAAAAAPAPAAAPAA+PAPEA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APA APASEAAP   AAPAEAEAKPAETAAAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

XP_022945074.1 copper transport protein ATX1-like [Cucurbita moschata]2.9e-50100Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

XP_022968569.1 copper transport protein ATX1-like isoform X1 [Cucurbita maxima]2.1e-4089.39Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPA     AAAAAAAPAPAAAPAA+PAP A
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAPA EAAP AAA PAEAEAKPAE+ AAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

XP_022968570.1 copper transport protein ATX1-like isoform X2 [Cucurbita maxima]5.4e-3679.55Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP          AAAPAP AAPAA+PAPEA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAP           PAEAEAKPAE+ AAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

XP_023541206.1 copper transport protein ATX1-like [Cucurbita pepo subsp. pepo]5.7e-4693.94Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPA APAP AAAAAAPAPAAAPAA+PAP A
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAPA EAAPAAAA PAEAEAKPAE+ AAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

TrEMBL top hitse value%identityAlignment
A0A6J1FZY8 copper transport protein ATX1-like1.4e-50100Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

A0A6J1HTV3 copper transport protein ATX1-like isoform X31.3e-3578.03Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP            APAP AAPAA+PAPEA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAP           PAEAEAKPAE+ AAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

A0A6J1HXJ6 copper transport protein ATX1-like isoform X22.6e-3679.55Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAP          AAAPAP AAPAA+PAPEA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAP           PAEAEAKPAE+ AAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

A0A6J1I011 copper transport protein ATX1-like isoform X11.0e-4089.39Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPA     AAAAAAAPAPAAAPAA+PAP A
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV
        APAAAPA EAAP AAA PAEAEAKPAE+ AAV
Subjt:  APAAAPASEAAPAAAAAPAEAEAKPAETAAAV

A0A6J1JL25 copper transport protein ATX1-like3.1e-2989.02Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWED+APA +    AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 451.1e-1050.82Show/hide
Query:  LKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        L V M C+GC   VRR + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

O82089 Copper transport protein CCH9.9e-1755.73Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKTGKKT+YW  E           A A P   A P      E 
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAA----APAEAEAKPAE
           A   +EA   A A      AEAE KP++
Subjt:  APAAAPASEAAPAAAA----APAEAEAKPAE

Q84J88 Heavy metal-associated isoprenylated plant protein 367.6e-0940.62Show/hide
Query:  TTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   ++++L K++GV T +ID+  QKVTV GNVE +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

Q94BT9 Copper transport protein ATX13.8e-2475.71Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE
        MSQT VL+VAM+C+GCVGAV+RVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 12.7e-2575.71Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE
        MSQT VL+VAM+C+GCVGAV+RVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE

AT1G66240.2 homolog of anti-oxidant 13.1e-2175Show/hide
Query:  MSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE
        M+C+GCVGAV+RVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E
Subjt:  MSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE

AT3G56240.1 copper chaperone7.0e-1855.73Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKTGKKT+YW  E           A A P   A P      E 
Subjt:  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEA

Query:  APAAAPASEAAPAAAA----APAEAEAKPAE
           A   +EA   A A      AEAE KP++
Subjt:  APAAAPASEAAPAAAA----APAEAEAKPAE

AT3G56891.1 Heavy metal transport/detoxification superfamily protein7.5e-1250.82Show/hide
Query:  LKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        L V M C+GC   VRR + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW

AT5G27690.1 Heavy metal transport/detoxification superfamily protein5.4e-1040.62Show/hide
Query:  TTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   ++++L K++GV T +ID+  QKVTV GNVE +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGAGTCGAGACATTTGACATCGACAT
TGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAA
CAGCACCAGCACCGGCGGCAGCCGCAGCAGCTGCCCCTGCACCGGCGGCAGCCCCAGCAGCATCGCCTGCACCGGAGGCGGCCCCAGCAGCGGCACCTGCATCAGAGGCG
GCCCCAGCAGCAGCAGCAGCACCAGCTGAAGCAGAAGCTAAACCAGCCGAGACTGCGGCTGCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
GTGAAAGCCTGCAAAACCCAGTAGCGCAGAGATTGGCGAGGGCGAATTTCCCGAGTGTCTGTAATCTTTAACCATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCAT
GTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGAGTCGAGACATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAG
CGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAACAGCACCAGCACCGGCGGCAGCCGCAGCAGCTGCCCC
TGCACCGGCGGCAGCCCCAGCAGCATCGCCTGCACCGGAGGCGGCCCCAGCAGCGGCACCTGCATCAGAGGCGGCCCCAGCAGCAGCAGCAGCACCAGCTGAAGCAGAAG
CTAAACCAGCCGAGACTGCGGCTGCTGTTTAAAGTATTACACCTATTTACTAATGGAAATTTTCTGTTGAATGCGTAAGGTCTTTTGCTTTGTCAAGCTAATAATGATGT
ATTAATACGTAAACTCGGCTTCTGAGTGTGTAGTATTTTGACAAGTGCCTCTTGAATGGCCTTCTACGTTAAAACTCAATTATAATCTACAGATATATTTTTGTTTTTGC
CTCAAATTCTCTTTTCCATTTCGACCTTCTGCTTCCTTGAAAAGACCTTCACTTGTCTACATTGTTGGAAATATTTCAATAAGAGCGTTTAAAGAC
Protein sequenceShow/hide protein sequence
MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEAAPAAAPASEA
APAAAAAPAEAEAKPAETAAAV