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CmoCh18G010080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G010080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReticulon-like protein
Genome locationCmo_Chr18:10967808..10968841
RNA-Seq ExpressionCmoCh18G010080
SyntenyCmoCh18G010080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573940.1 Reticulon-like protein B14, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2966.1Show/hide
Query:  MPVEEVVHSVCFRQGGGLKE---GIEL--YCRSFLDHEQVITIRNVYGKRTKRPELGYGRHVKMKECESKRILTRKQCSMAKCSVLICRNG---------
        MPVE VVHSVCFRQGGGLKE    + L    RSFLDHEQ+ITIRNVYGKRT RPELGY   VKMKECESKRILTRKQCSMAKCSVLIC N          
Subjt:  MPVEEVVHSVCFRQGGGLKE---GIEL--YCRSFLDHEQVITIRNVYGKRTKRPELGYGRHVKMKECESKRILTRKQCSMAKCSVLICRNG---------

Query:  KCMRAGD---PLMETQRW
         C +  D   P+ E   W
Subjt:  KCMRAGD---PLMETQRW

KAG7013004.1 Reticulon-like protein B9, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-5483.85Show/hide
Query:  MPVEEVVHSVCFRQGGGLKEGIELYCRSFLDHEQVITIRNVYGKRTKRPELGYGRHVKMKECESKRILTRKQCSMAKCSVLICRNGKC----------MR
        MPV+ V HSVC RQGGGLKEGIELYCRSFLDHEQ+ITIRNVYGKRT RPELGY   VKMKECESKRILTRKQCSMAKCSVLIC NGKC           R
Subjt:  MPVEEVVHSVCFRQGGGLKEGIELYCRSFLDHEQVITIRNVYGKRTKRPELGYGRHVKMKECESKRILTRKQCSMAKCSVLICRNGKC----------MR

Query:  AGDPLMETQRWLACLVFIGPVTKFLIPPYQ
        AGDPLMETQRWLACLVFIGPVTKFLIPPYQ
Subjt:  AGDPLMETQRWLACLVFIGPVTKFLIPPYQ

XP_022945840.1 reticulon-like protein B14 isoform X3 [Cucurbita moschata]4.8e-05100Show/hide
Query:  MKECESKRILTRKQCSMAKCSVLICRN
        MKECESKRILTRKQCSMAKCSVLICRN
Subjt:  MKECESKRILTRKQCSMAKCSVLICRN

TrEMBL top hitse value%identityAlignment
A0A6J1G247 Reticulon-like protein2.3e-05100Show/hide
Query:  MKECESKRILTRKQCSMAKCSVLICRN
        MKECESKRILTRKQCSMAKCSVLICRN
Subjt:  MKECESKRILTRKQCSMAKCSVLICRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTTGAAGAAGTGGTACACTCAGTTTGCTTTCGTCAAGGTGGGGGATTGAAGGAAGGCATTGAACTGTACTGCAGGAGTTTCCTTGACCATGAACAGGTTATAAC
GATTAGAAATGTATATGGAAAGCGTACAAAACGCCCTGAACTTGGGTATGGCCGTCATGTGAAGATGAAAGAATGTGAAAGCAAGAGGATCCTTACTCGTAAGCAATGCT
CAATGGCCAAGTGTTCTGTCCTGATCTGTAGAAATGGTAAGTGTATGAGGGCAGGGGACCCACTAATGGAAACACAGCGTTGGCTTGCTTGCCTGGTGTTCATAGGACCT
GTAACAAAGTTTCTGATTCCACCATACCAAGGTATTAAAACTAAATTGGAAAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGTTGAAGAAGTGGTACACTCAGTTTGCTTTCGTCAAGGTGGGGGATTGAAGGAAGGCATTGAACTGTACTGCAGGAGTTTCCTTGACCATGAACAGGTTATAAC
GATTAGAAATGTATATGGAAAGCGTACAAAACGCCCTGAACTTGGGTATGGCCGTCATGTGAAGATGAAAGAATGTGAAAGCAAGAGGATCCTTACTCGTAAGCAATGCT
CAATGGCCAAGTGTTCTGTCCTGATCTGTAGAAATGGTAAGTGTATGAGGGCAGGGGACCCACTAATGGAAACACAGCGTTGGCTTGCTTGCCTGGTGTTCATAGGACCT
GTAACAAAGTTTCTGATTCCACCATACCAAGGTATTAAAACTAAATTGGAAAATGCTTGA
Protein sequenceShow/hide protein sequence
MPVEEVVHSVCFRQGGGLKEGIELYCRSFLDHEQVITIRNVYGKRTKRPELGYGRHVKMKECESKRILTRKQCSMAKCSVLICRNGKCMRAGDPLMETQRWLACLVFIGP
VTKFLIPPYQGIKTKLENA