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CmoCh18G010360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G010360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NIM1-INTERACTING 2
Genome locationCmo_Chr18:11112040..11113456
RNA-Seq ExpressionCmoCh18G010360
SyntenyCmoCh18G010360
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573971.1 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia]5.3e-7599.36Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNER+MTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_022944860.1 uncharacterized protein LOC111449260 [Cucurbita moschata]2.4e-75100Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_022968293.1 uncharacterized protein LOC111467566 [Cucurbita maxima]2.5e-5682.17Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFPSSR DRGKRKRERGEHADY+AAAA AGNQK+TVA+RG ER+MTSDEEVEEFF ILKRLHAATKYIEKIDGARS LMGKRAKTAKASEKEGDGV
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        EIRTKRIPEQKLDRNLDLDLDLNLEPAS                   DDSAADSRRK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_023542001.1 uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo]3.9e-7095.51Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNER+MTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIP+QKLDRN  LDLDLNLEP  VESDGKERRSRSHNLKSLT DSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

XP_038892789.1 protein NIM1-INTERACTING 2 [Benincasa hispida]1.0e-3865.61Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP+SR TDRGKRKRE          A  G+Q++ VA+RG E +  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR+K  K+SE+E D V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        EIR ++IP+ KLDRN  LDLDLNLEPA VESD  ++ SRS NLK+   DSAADS RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

TrEMBL top hitse value%identityAlignment
A0A0A0KT67 Uncharacterized protein6.9e-3664.33Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP+SR T+RGKRK  RG+       A  GNQK+  AE G E +  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR K  K++E+EGD V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
         I+ +RIPEQKLDRN  LDLDLNLEP  VES+GK R  +  N K    DSAADS RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A1S3BFE7 protein NIM1-INTERACTING 21.4e-3665.61Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E +  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
         IR +RIPEQKLDRN  LDLDLNLEP  VES+GK R+S+  NLK    DSAA S RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A5A7SZN6 Protein NIM1-INTERACTING 21.4e-3665.61Show/hide
Query:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E +  +DEEVEEFF+ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V
Subjt:  MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
         IR +RIPEQKLDRN  LDLDLNLEP  VES+GK R+S+  NLK    DSAA S RK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A6J1FZ89 uncharacterized protein LOC1114492601.2e-75100Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
        MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVE

Query:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
Subjt:  IRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

A0A6J1HXL3 uncharacterized protein LOC1114675661.2e-5682.17Show/hide
Query:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV
        MPFELFPSSR DRGKRKRERGEHADY+AAAA AGNQK+TVA+RG ER+MTSDEEVEEFF ILKRLHAATKYIEKIDGARS LMGKRAKTAKASEKEGDGV
Subjt:  MPFELFPSSRTDRGKRKRERGEHADYDAAAA-AGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGV

Query:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK
        EIRTKRIPEQKLDRNLDLDLDLNLEPAS                   DDSAADSRRK
Subjt:  EIRTKRIPEQKLDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCTGATTACGATGCCGCCGCCGCTGCCGGAAACCAGAAGGA
GACGGTGGCGGAGAGAGGAAATGAGAGGCAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGA
TCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGAGCAGAAA
TTGGACAGAAATTTGGATTTGGATCTGGATCTGAACTTAGAACCTGCTTCCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCATTAACCGA
CGATTCGGCTGCCGATTCTCGTCGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTTGAGTTGTTTCCATCGAGTCGTACGGATAGAGGGAAAAGAAAGCGGGAGCGGGGAGAACACGCTGATTACGATGCCGCCGCCGCTGCCGGAAACCAGAAGGA
GACGGTGGCGGAGAGAGGAAATGAGAGGCAGATGACGTCGGATGAAGAGGTGGAGGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACGAAATACATAGAGAAGA
TCGATGGTGCGAGAAGCTTGTTGATGGGGAAAAGAGCGAAGACGGCGAAGGCGAGCGAGAAAGAAGGCGATGGAGTTGAAATTAGAACAAAGAGAATTCCAGAGCAGAAA
TTGGACAGAAATTTGGATTTGGATCTGGATCTGAACTTAGAACCTGCTTCCGTTGAATCGGACGGTAAGGAGAGGAGAAGCCGGAGCCACAATCTGAAGTCATTAACCGA
CGATTCGGCTGCCGATTCTCGTCGGAAGTAGAAATTTACGGCGGCGGAGGTTACAGTTCGGCTATACCTGAAAGAACTCGATCGCTCCGATCATGCGGACCGATGAACTG
ATATTGGAGGCTTCTGGTTGCGGATCCGGGAGAAAACGGTTGGTTTCATTGATTCCTAGTAGGATTGGGACGTAAGAGAATCGAATCGAGGCTAGATTGGGATCACATGG
CCTCGAGAGAGCCAGACTTTTCAAGGTGGGTCGACCAAGCTTAGGTTCAAGCTGTTAGATGAACACGACTCTCCACAATAGTATGATATTGTCCACTTTGAACATAAACT
CTAGTGACTTTGCTTTGGGTTCCCCAAAGGCCCCACACCAATAGAGATAGTCGTGTTCATCTAACATGGCATCAGAGCATCATTCTGAGTATCAGAGTTGTGCCCTAGAC
TTAGACATGTCAATTGTTGAACAAAAATATTGTGAGGCTCGAAGGCATAGTAAAAAACGACTAACACTCCAAAAGAAAAGAAGTCGAGCCTCGATTAAAGTCTCATCGGC
TAATTTAAGGAATAATAATGAATTTATAATCAAGAAATACTATCTCCATCGGTATAAGACATTTTGGGGAAGCCAAAAGTAAAGTCACGAGAGCTTATGTTCTAAGTGGA
CAACATCATAGCATTGTGAGATCGGTGATTACTAACATGATATCAGAACATCATTCTTTACTACCGAGTTCGAATTTATGTTTTGGCTAACCTACATCGAGCTTTTGATT
CGATCTATCTCTCAAATAATATATGAATGTATTCTGAGTATTGGTCCCAAAAAAACGG
Protein sequenceShow/hide protein sequence
MPFELFPSSRTDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFAILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQK
LDRNLDLDLDLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK