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CmoCh18G010410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G010410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHeavy metal-associated domain containing protein
Genome locationCmo_Chr18:11137833..11139320
RNA-Seq ExpressionCmoCh18G010410
SyntenyCmoCh18G010410
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573976.1 hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sororia]6.2e-3776.15Show/hide
Query:  MAERPNKT-AAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
        MAERPNKT AAAGIGVRKLKIFPHASSLAS+ESLSLPL                           VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
Subjt:  MAERPNKT-AAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVN

Query:  LLDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LLDKKVILTRKLQI TSR STIKRLLGSSF
Subjt:  LLDKKVILTRKLQIQTSRVSTIKRLLGSSF
KAG7013033.1 hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3776.92Show/hide
Query:  MAERPNKT-AAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
        MAERPNKT AAAGIGVRKLKIFPHASSLAS+ESLSLPL                           VQEIVFAADIGCAECQKKLANILAKMNDTESVVVN
Subjt:  MAERPNKT-AAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVN

Query:  LLDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LLDKKVILTRKLQI TSRVSTIKRLLGSSF
Subjt:  LLDKKVILTRKLQIQTSRVSTIKRLLGSSF
XP_022945537.1 uncharacterized protein LOC111449743 isoform X1 [Cucurbita moschata]5.8e-59100Show/hide
Query:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
        MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
Subjt:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL

Query:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LDKKVILTRKLQIQTSRVSTIKRLLGSSF
Subjt:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
XP_022945538.1 uncharacterized protein LOC111449743 isoform X2 [Cucurbita moschata]4.6e-5698.45Show/hide
Query:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
        MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMN  ESVVVNL
Subjt:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL

Query:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LDKKVILTRKLQIQTSRVSTIKRLLGSSF
Subjt:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
XP_022945539.1 uncharacterized protein LOC111449743 isoform X3 [Cucurbita moschata]1.3e-3979.07Show/hide
Query:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
        MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPL                           VQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
Subjt:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL

Query:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LDKKVILTRKLQIQTSRVSTIKRLLGSSF
Subjt:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
TrEMBL top hitse value%identityAlignment
A0A6J1G168 uncharacterized protein LOC111449743 isoform X22.2e-5698.45Show/hide
Query:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
        MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMN  ESVVVNL
Subjt:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL

Query:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LDKKVILTRKLQIQTSRVSTIKRLLGSSF
Subjt:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
A0A6J1G176 uncharacterized protein LOC111449743 isoform X12.8e-59100Show/hide
Query:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
        MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
Subjt:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL

Query:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LDKKVILTRKLQIQTSRVSTIKRLLGSSF
Subjt:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
A0A6J1G188 uncharacterized protein LOC111449743 isoform X36.5e-4079.07Show/hide
Query:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
        MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPL                           VQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL
Subjt:  MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNL

Query:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
        LDKKVILTRKLQIQTSRVSTIKRLLGSSF
Subjt:  LDKKVILTRKLQIQTSRVSTIKRLLGSSF
A0A6J1HUG9 uncharacterized protein LOC111467567 isoform X31.3e-3572.52Show/hide
Query:  MAERPNK--TAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVV
        MAERPNK   AAAGIGVRKLKIFPHASSLAS+ESLSLPL                           VQEIVF ADIGCAECQKKLANIL+KMNDTESVVV
Subjt:  MAERPNK--TAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVV

Query:  NLLDKKVILTRKLQIQTSRVSTIKRLLGSSF
        NLLDKKVILTRKLQI +SRVST+KRLLGSSF
Subjt:  NLLDKKVILTRKLQIQTSRVSTIKRLLGSSF
A0A6J1HZ87 uncharacterized protein LOC111467567 isoform X16.9e-3491.01Show/hide
Query:  FSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIQTSRVSTIKRLLGSSF
        F  YLRRFSSSPAEIN LWSVILQVQEIVF ADIGCAECQKKLANIL+KMNDTESVVVNLLDKKVILTRKLQI +SRVST+KRLLGSSF
Subjt:  FSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIQTSRVSTIKRLLGSSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68585.1 unknown protein2.9e-0836.61Show/hide
Query:  SSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILT------RKL-----QI
        +SLASV SLS+PL                           +QEIV +ADI C++CQ+K+A+I+A+M +T S++V++L+KKV LT      R++     + 
Subjt:  SSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILT------RKL-----QI

Query:  QTSRVSTIKRLL
           ++STIKRL+
Subjt:  QTSRVSTIKRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCGGCCCAACAAGACGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCGTCGAATCCTTATCTCTGCCTCT
CGTCTCTGCTTTTTCTCTGTATCTCCGCCGTTTTTCGAGCTCTCCGGCTGAAATTAACGCTTTATGGTCCGTGATTCTTCAGGTTCAGGAAATCGTGTTCGCGGCGGACA
TTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGATACAGAGTCTGTGGTGGTGAATTTGCTGGACAAGAAAGTGATACTGACTCGAAAA
TTGCAGATTCAAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAACAAGGGAGTTTTTGGTCACACAAGCAACCTCGAAGGAATCATCCATGAGAGGAAAAAATTGGCTAACTCTTTGCGGAAAGCAGCTGTCATTGTGAAACGAACCAT
CTTTGTCAACTCTTACTTATCTTCCTTTCCCCTTCTCCTTTATCGCAACCACTTAAACAAAGCTTTTCACAGTCCCATCATCCATGGCTCATAAAATCCTCCCCTGTTTC
GCCGGCAGCGTTTAACCGGACCATGGCGGAGCGGCCCAACAAGACGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCG
TCGAATCCTTATCTCTGCCTCTCGTCTCTGCTTTTTCTCTGTATCTCCGCCGTTTTTCGAGCTCTCCGGCTGAAATTAACGCTTTATGGTCCGTGATTCTTCAGGTTCAG
GAAATCGTGTTCGCGGCGGACATTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGATACAGAGTCTGTGGTGGTGAATTTGCTGGACAA
GAAAGTGATACTGACTCGAAAATTGCAGATTCAAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCTGATAATGGTGAAGATATTGTGATATATAAT
GGAATATTTTCAGTCACATTCGTAGATAAATAAAGGATCATACTCTTTGTTGTTTACTTTCAGCGATTATTGTTTTTATGAGAATATTAAATATTGGGTTCCGAATGCAA
CAAAATCATCGTACATTAAAAGATGATTTTGATCGGAGTTGAAAACATTTTAAAGGGGTGAGTCTTGCTGGAAAACATGGCTCTGGCTCAATGTAATTACGGGTTTAATC
GATTAATGCTCCGTTTGTGTCGTTTTGGTTA
Protein sequenceShow/hide protein sequence
MAERPNKTAAAGIGVRKLKIFPHASSLASVESLSLPLVSAFSLYLRRFSSSPAEINALWSVILQVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRK
LQIQTSRVSTIKRLLGSSF