; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G010450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G010450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHomologous-pairing protein 2 homolog
Genome locationCmo_Chr18:11154025..11156028
RNA-Seq ExpressionCmoCh18G010450
SyntenyCmoCh18G010450
Gene Ontology termsGO:0000709 - meiotic joint molecule formation (biological process)
GO:0007129 - synapsis (biological process)
GO:0010774 - meiotic strand invasion involved in reciprocal meiotic recombination (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0000794 - condensed nuclear chromosome (cellular component)
GO:0120231 - DNA recombinase auxiliary factor complex (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0120230 - recombinase activator activity (molecular function)
InterPro domainsIPR010776 - Homologous-pairing protein 2, winged helix domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040461 - Homologous-pairing protein 2
IPR040661 - Leucine zipper with capping helix domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573980.1 Homologous-pairing protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-11296.9Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPK D AEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQF IPNSEELTQMKESN+TLQ+NLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEIRTLQSNLTL+QMREKEARLRKEVKEL DKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

XP_022945821.1 homologous-pairing protein 2 homolog isoform X2 [Cucurbita moschata]4.0e-116100Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

XP_022945822.1 homologous-pairing protein 2 homolog isoform X3 [Cucurbita moschata]4.0e-116100Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

XP_023541751.1 homologous-pairing protein 2 homolog isoform X2 [Cucurbita pepo subsp. pepo]4.2e-11397.35Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPK D AEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDAL DSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEE+IRTLQSNLTL+QMREKEARLRKEVKEL DKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

XP_023541752.1 homologous-pairing protein 2 homolog isoform X3 [Cucurbita pepo subsp. pepo]4.2e-11397.35Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPK D AEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDAL DSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEE+IRTLQSNLTL+QMREKEARLRKEVKEL DKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

TrEMBL top hitse value%identityAlignment
A0A6J1G1Y1 Homologous-pairing protein 2 homolog2.0e-116100Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

A0A6J1G1Z5 Homologous-pairing protein 2 homolog2.0e-116100Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFTDMLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

A0A6J1G226 Homologous-pairing protein 2 homolog4.8e-10797.24Show/hide
Query:  AIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKKAISQVEEEI
        +I L F   QNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKKAISQVEEEI
Subjt:  AIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKKAISQVEEEI

Query:  RTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIEYDEDVGVNL
        RTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIEYDEDVGVNL
Subjt:  RTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIEYDEDVGVNL

Query:  QSFTDMLPQTRKRPRGR
        QSFTDMLPQTRKRPRGR
Subjt:  QSFTDMLPQTRKRPRGR

A0A6J1HWT5 Homologous-pairing protein 2 homolog4.7e-11094.69Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPK DSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGK+SFKEYGKQKIYLARQDQFKIPNSE LTQMKESN+TLQ+NLH+QKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEI+TLQSNLTL+QMREKEARLRKEVKEL DKLEILR GVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTI ENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFT+MLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

A0A6J1HZ82 Homologous-pairing protein 2 homolog4.7e-11094.69Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPK DSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGK+SFKEYGKQKIYLARQDQFKIPNSE LTQMKESN+TLQ+NLH+QKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        AISQVEEEI+TLQSNLTL+QMREKEARLRKEVKEL DKLEILR GVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTI ENSPKDLKEFKEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVGVNLQSFT+MLPQTRKRPRGR
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

SwissProt top hitse value%identityAlignment
O35047 Homologous-pairing protein 2 homolog4.8e-2738.28Show/hide
Query:  APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        A  +  A  I+L ++ EQNRP ++Q+V   LQK   L K AV KALD LA  GKI  K YGKQKIY A Q+QF   +  +L  +  S   L   +   ++
Subjt:  APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        +   +E E++ L S LT  +M+++   L+KE  +  ++L+ ++     V PE+++ +     +   +WR+RKRM  +L D I E  PK  K+F EE+GIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNL
         DED  V L
Subjt:  YDEDVGVNL

Q63ZL2 Homologous-pairing protein 2 homolog1.6e-2737.14Show/hide
Query:  KSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKKAI
        K  +A +I+L ++N+QNRP ++Q+V   LQ+   L KTAV K ++ LA  GKI  K YGKQKIY A Q+QF   +  EL  +    + L   L   +++ 
Subjt:  KSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKKAI

Query:  SQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEK---LSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGI
         Q+E E++ L S+LT ++M ++ + L++E      KL  ++     V P ++   E +Y E+     +W++RKRM  D++D I E  PK  K+F EE+G+
Subjt:  SQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEK---LSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGI

Query:  EYDEDVGVNL
        E DED  V +
Subjt:  EYDEDVGVNL

Q91ZY6 Homologous-pairing protein 2 homolog9.6e-2839.23Show/hide
Query:  APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        A  +  A  IVL ++ EQNRP ++Q+V   LQK   L K AV KALD LA  GKI  K YGKQKIY A QDQF   +  +L  +  S   L   +   ++
Subjt:  APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        +   +E E++ L S LT  +M+ +   L+KE     ++L+ ++     V PE+++ +     +   +WR+RKRM  +L D I E  PK  K+F EE+GIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNL
         DED  V L
Subjt:  YDEDVGVNL

Q9FX64 Homologous-pairing protein 2 homolog6.7e-9071.68Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPKSD+ EAIVLNFVNEQN+PLN+QN AD LQKFNLKKTAVQKALD+LAD+GKI+FKEYGKQKIY+ARQDQF+IPNSEEL QMKE N+ LQ+ L E+KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
         IS VE EI++LQSNLTL++++EK+A+LRKEVKE+ +KL  LREG+TLV+PED+KA+E +Y++K++QWR+RKRMF+D+WDT+TENSPKD+KE KEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVG++ Q++ D++   +KRPRG+
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR

Q9P2W1 Homologous-pairing protein 2 homolog2.6e-2536.84Show/hide
Query:  APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        A  +  A  I+L ++ EQNRP +SQ+V   LQ+   L K  V K L+ LA  GKI  K YGKQKIY A QDQF + +  +L  +      L   +   ++
Subjt:  APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
        +   +E E++ L S LT  +M+++   L+KE     ++L+ ++     V PE+++ +     +   +WR+RKRM  +L D I E  PK  K+F EE+GIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNL
         DED  V L
Subjt:  YDEDVGVNL

Arabidopsis top hitse value%identityAlignment
AT1G13330.1 Arabidopsis Hop2 homolog4.8e-9171.68Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK
        MAPKSD+ EAIVLNFVNEQN+PLN+QN AD LQKFNLKKTAVQKALD+LAD+GKI+FKEYGKQKIY+ARQDQF+IPNSEEL QMKE N+ LQ+ L E+KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKK

Query:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE
         IS VE EI++LQSNLTL++++EK+A+LRKEVKE+ +KL  LREG+TLV+PED+KA+E +Y++K++QWR+RKRMF+D+WDT+TENSPKD+KE KEELGIE
Subjt:  AISQVEEEIRTLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIE

Query:  YDEDVGVNLQSFTDMLPQTRKRPRGR
        YDEDVG++ Q++ D++   +KRPRG+
Subjt:  YDEDVGVNLQSFTDMLPQTRKRPRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCAAATCCGACAGCGCAGAGGCGATCGTACTCAACTTCGTAAATGAGCAAAATCGTCCACTGAACTCTCAAAACGTTGCTGATTGCTTACAAAAGTTCAACCT
CAAGAAGACGGCGGTGCAAAAGGCACTGGATGCTCTTGCCGATAGTGGAAAGATTTCTTTCAAGGAATATGGTAAACAGAAGATATATCTCGCCCGGCAAGACCAATTCA
AGATCCCAAACAGCGAGGAACTTACTCAGATGAAGGAATCAAACTCCACATTGCAGCAAAATCTACACGAGCAGAAAAAAGCTATTAGCCAGGTTGAAGAAGAAATACGA
ACTTTGCAGTCAAATTTAACGCTGCAACAGATGCGGGAAAAAGAAGCCAGGCTCAGAAAGGAGGTTAAGGAATTGGTAGACAAATTGGAAATATTGCGCGAAGGTGTTAC
ACTGGTGAAGCCAGAAGACCGCAAAGCAATTGAGCATATATACTCTGAGAAATTAAGCCAGTGGCGAAGGAGAAAAAGAATGTTCAAAGATCTATGGGATACCATCACCG
AGAACTCACCTAAGGATCTAAAAGAATTCAAGGAAGAACTTGGCATTGAATATGATGAAGATGTAGGTGTAAATTTGCAGTCATTCACCGACATGTTACCACAAACTCGA
AAACGACCCAGGGGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCAAATCCGACAGCGCAGAGGCGATCGTACTCAACTTCGTAAATGAGCAAAATCGTCCACTGAACTCTCAAAACGTTGCTGATTGCTTACAAAAGTTCAACCT
CAAGAAGACGGCGGTGCAAAAGGCACTGGATGCTCTTGCCGATAGTGGAAAGATTTCTTTCAAGGAATATGGTAAACAGAAGATATATCTCGCCCGGCAAGACCAATTCA
AGATCCCAAACAGCGAGGAACTTACTCAGATGAAGGAATCAAACTCCACATTGCAGCAAAATCTACACGAGCAGAAAAAAGCTATTAGCCAGGTTGAAGAAGAAATACGA
ACTTTGCAGTCAAATTTAACGCTGCAACAGATGCGGGAAAAAGAAGCCAGGCTCAGAAAGGAGGTTAAGGAATTGGTAGACAAATTGGAAATATTGCGCGAAGGTGTTAC
ACTGGTGAAGCCAGAAGACCGCAAAGCAATTGAGCATATATACTCTGAGAAATTAAGCCAGTGGCGAAGGAGAAAAAGAATGTTCAAAGATCTATGGGATACCATCACCG
AGAACTCACCTAAGGATCTAAAAGAATTCAAGGAAGAACTTGGCATTGAATATGATGAAGATGTAGGTGTAAATTTGCAGTCATTCACCGACATGTTACCACAAACTCGA
AAACGACCCAGGGGAAGGTGAGTGATACCACAATTTGGGACGTCCAACAGGAGTAAAACAAAGAAGAATTATTTGCTTATATTACTTCTCTTTATTCAATCCGTTAAGGC
AAATACAGGTAGATTCTGTCTGCTTAGAGCTTGCCTTTTGTATCACAAATACTTCTCAAGTTGCTTTTCGTTGATTCATGCTGAGTGAAGATACCGTTTATTTACTGTAA
TTCTCAGTAAAAGAAACTGCCGTCTCTGACACTCTTTCTTGGTCCGTAGGGTTCTTAAATTGTTGAATCAGAAAACTCCAGAGATCTTTCCCTCAATTGATTGACCTGTG
AACTAAATTAATATTGTTCTGCTGTTGTGTGAACTTAAGAAAACAGATTCCTTTCTTATCTGCACTAGGTTAATGCATCAGCCTTTAGCCTCATGTGTTGCCTAACAAG
Protein sequenceShow/hide protein sequence
MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKESNSTLQQNLHEQKKAISQVEEEIR
TLQSNLTLQQMREKEARLRKEVKELVDKLEILREGVTLVKPEDRKAIEHIYSEKLSQWRRRKRMFKDLWDTITENSPKDLKEFKEELGIEYDEDVGVNLQSFTDMLPQTR
KRPRGR