CuGenDBv2

Gene ID	CmoCh18G010840
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	importin-9
Genome location	Cmo_Chr18:11381468..11382484
RNA-Seq Expression	CmoCh18G010840
Synteny	CmoCh18G010840
Gene Ontology terms	GO:0006606 - protein import into nucleus (biological process) GO:0005635 - nuclear envelope (cellular component) GO:0005829 - cytosol (cellular component) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034507.1 importin-9 isoform X1 [Cucumis melo var. makuwa]

2.4e-30

77.08

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP---------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP         QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP---------QFIKKHWQEGDELFEHPTVSDDDKS

XP_004135416.1 importin-9 isoform X1 [Cucumis sativus]

5.3e-30

74.75

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP            QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

XP_022149014.1 importin-9 [Momordica charantia]

4.1e-30

72.73

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWLLNCLSATLDPN EVRS+AE SLNQASLQPG     FGVALSK++ANRELP            QFIKKHWQ+G+ELFEHP VSDD+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

XP_031741860.1 importin-9 isoform X2 [Cucumis sativus]

5.3e-30

74.75

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP            QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

XP_038892157.1 importin-9 [Benincasa hispida]

1.1e-30

73.74

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MAN++DQDQQWL+NCLSATLDPNQEVRSFAE SLNQASLQPG     FGVALSKVTANRELP            QFIKKHWQEGDE FEHP VS+D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQZ8 Importin N-terminal domain-containing protein

2.6e-30

74.75

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP            QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

A0A1S3BF85 importin-9 isoform X1

2.6e-30

74.75

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP            QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

A0A1S3BFX2 importin-9 isoform X2

2.6e-30

74.75

Show/hide

Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP            QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

A0A5A7SZ00 Importin-9 isoform X1

1.2e-30

77.08

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP---------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWL+NCLSATLDPN EVRSFAE SLNQASLQPG     FGVALSKV ANRELP         QFIKKHWQEGDELFEHP VS D+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP---------QFIKKHWQEGDELFEHPTVSDDDKS

A0A6J1D5R8 importin-9

2.0e-30

72.73

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Query:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS
        MANVIDQDQQWLLNCLSATLDPN EVRS+AE SLNQASLQPG     FGVALSK++ANRELP            QFIKKHWQ+G+ELFEHP VSDD+K+
Subjt:  MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELP------------QFIKKHWQEGDELFEHPTVSDDDKS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26170.1 ARM repeat superfamily protein

1.9e-25

60.42

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Query:  VIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRE------------LPQFIKKHWQEGDELFEHPTVSDDDKS
        V+DQDQQWLL CLSA+LDPNQ VRSFAETSLNQASLQPG     FG AL +V AN++            L QFIKKHW+E +E FE+P VS ++K+
Subjt:  VIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRE------------LPQFIKKHWQEGDELFEHPTVSDDDKS

Sequences

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CDS sequence

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ATGGCCAATGTGATTGATCAAGATCAACAGTGGCTTCTCAATTGCTTGTCCGCCACTCTTGACCCCAACCAGGAGGTTCGCTCATTCGCTGAAACCTCGCTAAATCAGGC
ATCTCTCCAACCAGGTTCTTGCCGTCACCGTTTTGGGGTTGCATTATCCAAAGTCACTGCGAACAGGGAGCTGCCACAGTTCATCAAAAAACACTGGCAGGAGGGTGACG
AATTATTTGAACATCCCACTGTTTCTGACGATGATAAGTCATTCGCAAGCTTCTTTTGTTAA

mRNA sequence

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Protein sequence

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MANVIDQDQQWLLNCLSATLDPNQEVRSFAETSLNQASLQPGSCRHRFGVALSKVTANRELPQFIKKHWQEGDELFEHPTVSDDDKSFASFFC

CmoCh18G010840 (gene) of Cucurbita moschata (Rifu) v1 genome