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CmoCh18G011380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G011380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLeucine-rich repeat receptor-like protein kinase
Genome locationCmo_Chr18:11662129..11664225
RNA-Seq ExpressionCmoCh18G011380
SyntenyCmoCh18G011380
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034461.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]5.0e-2535.17Show/hide
Query:  MRSRLLLAGEWCIHGLEMIRVAMVIFLLGPVSLVLLKEITEREVYEVSIVGPFPTAVTNLLDLTR-----------------------------------
        MRSRLLLAGEWCI G  MIRVAMVI LLG VSLVLLKEI E EVY VSIVGPFPTAVTNLLDLTR                                   
Subjt:  MRSRLLLAGEWCIHGLEMIRVAMVIFLLGPVSLVLLKEITEREVYEVSIVGPFPTAVTNLLDLTR-----------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------LFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
                                            LFLDYNQFSGRI D FYKHPLLKEMFI+GNAFRQ VKPI  HK LEVSD +FLV
Subjt:  ------------------------------------LFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

KAB2073362.1 hypothetical protein ES319_A07G077300v1 [Gossypium barbadense]1.1e-2469.14Show/hide
Query:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        +TE EVY VSI+GPFP A+TNLLDLTRL+LD+NQFSGRIP+  YKHP LKE++I+GN FR  V PI  HK LE+SD +FLV
Subjt:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

KAG6574052.1 putative inactive receptor kinase, partial [Cucurbita argyrosperma subsp. sororia]3.7e-3693.98Show/hide
Query:  KEITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        +E+T+ EVYEVSIVGPFPTAVTNLLDLT LFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
Subjt:  KEITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

XP_022968318.1 uncharacterized protein LOC111467583 [Cucurbita maxima]1.3e-3379.25Show/hide
Query:  EMIRVAMVIFLLGPVSLVLLKEITE---REVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVS
        EMIRVAMVIFLLG VSLVLLKEITE     +    +   FPTAVTNLLDLT LFLDYNQFSGRIPDDFYKHPLLKEMFI  NA  QQVKPI +HKALEVS
Subjt:  EMIRVAMVIFLLGPVSLVLLKEITE---REVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVS

Query:  DAEFLV
        DAEFLV
Subjt:  DAEFLV

XP_022973271.1 probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita maxima]1.1e-1962.79Show/hide
Query:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFL
        L  +T  E+  +S   + G  P  V ++  LT L+LD+NQFSGRIPD FYKHP LKEM+IEGNAFRQ VKPI IHK LEVSDAEFL
Subjt:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFL

TrEMBL top hitse value%identityAlignment
A0A2P5VXF4 LRRNT_2 domain-containing protein5.4e-2569.14Show/hide
Query:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        +TE EVY VSI+GPFP A+TNLLDLTRL+LD+NQFSGRIP+  YKHP LKE++I+GN FR  V PI  HK LE+SD +FLV
Subjt:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

A0A5A7SYD4 Putative leucine-rich repeat receptor-like protein kinase2.4e-2535.17Show/hide
Query:  MRSRLLLAGEWCIHGLEMIRVAMVIFLLGPVSLVLLKEITEREVYEVSIVGPFPTAVTNLLDLTR-----------------------------------
        MRSRLLLAGEWCI G  MIRVAMVI LLG VSLVLLKEI E EVY VSIVGPFPTAVTNLLDLTR                                   
Subjt:  MRSRLLLAGEWCIHGLEMIRVAMVIFLLGPVSLVLLKEITEREVYEVSIVGPFPTAVTNLLDLTR-----------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------LFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
                                            LFLDYNQFSGRI D FYKHPLLKEMFI+GNAFRQ VKPI  HK LEVSD +FLV
Subjt:  ------------------------------------LFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

A0A6J1HXP1 uncharacterized protein LOC1114675836.4e-3479.25Show/hide
Query:  EMIRVAMVIFLLGPVSLVLLKEITE---REVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVS
        EMIRVAMVIFLLG VSLVLLKEITE     +    +   FPTAVTNLLDLT LFLDYNQFSGRIPDDFYKHPLLKEMFI  NA  QQVKPI +HKALEVS
Subjt:  EMIRVAMVIFLLGPVSLVLLKEITE---REVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVS

Query:  DAEFLV
        DAEFLV
Subjt:  DAEFLV

A0A6J1I873 probable leucine-rich repeat receptor-like protein kinase At1g357105.3e-2062.79Show/hide
Query:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFL
        L  +T  E+  +S   + G  P  V ++  LT L+LD+NQFSGRIPD FYKHP LKEM+IEGNAFRQ VKPI IHK LEVSDAEFL
Subjt:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFL

A0A6J1J9I3 LRR receptor-like serine/threonine-protein kinase GSO16.9e-2063.22Show/hide
Query:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        L  +T  E+  +S   + G  P  +  +  LT LFLDYNQFSGRI D FYKHPLLKEMFIEGNAFRQ VKPI  HK LEVSDA+FLV
Subjt:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

SwissProt top hitse value%identityAlignment
Q9FMD7 Probable inactive receptor kinase At5g165901.3e-0433.33Show/hide
Query:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQV
        +T   +  V + GP P A+ NL  L  L   +N  +G +P DF    LL+ ++++GNAF  ++
Subjt:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQV

Arabidopsis top hitse value%identityAlignment
AT1G13910.1 Leucine-rich repeat (LRR) family protein4.9e-1849.43Show/hide
Query:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        L  +T  E+  +S   + G  P A+ ++  LT L LD+N F+G IP+ FYKHP LK+M+IEGNAF+  VK I  HK LE+SD +FLV
Subjt:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

AT4G16162.3 Leucine-rich repeat (LRR) family protein3.6e-0537.04Show/hide
Query:  IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVK
        + GP P  + N++ L RL L+ NQ SG +P +  +   LK +F+  N FR  +K
Subjt:  IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVK

AT5G16590.1 Leucine-rich repeat protein kinase family protein9.5e-0633.33Show/hide
Query:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQV
        +T   +  V + GP P A+ NL  L  L   +N  +G +P DF    LL+ ++++GNAF  ++
Subjt:  ITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQV

AT5G61240.1 Leucine-rich repeat (LRR) family protein4.7e-2154.02Show/hide
Query:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        L  +T  E+  +S    +G  P A+ ++  LT L+LD+NQF+GRIPD FYKHP LKEM+IEGN F+  V PI  HK LEVSDA+F V
Subjt:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV

AT5G61240.2 Leucine-rich repeat (LRR) family protein4.7e-2154.02Show/hide
Query:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV
        L  +T  E+  +S    +G  P A+ ++  LT L+LD+NQF+GRIPD FYKHP LKEM+IEGN F+  V PI  HK LEVSDA+F V
Subjt:  LKEITEREVYEVS---IVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKALEVSDAEFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCATGGGTTGGAGATGATCCGTGTGGCGATGGTGATCTTCCTGCTTGGTCCGGTGTCACTTGTTCTACTCAA
GGAGATTACAGAGAGGGAAGTTTATGAGGTTTCTATTGTCGGACCGTTTCCCACTGCTGTTACTAATCTCTTGGATCTTACTAGGCTGTTCTTGGACTACAACCAATTTA
GTGGGAGAATTCCAGATGATTTTTACAAACATCCATTATTGAAAGAGATGTTCATCGAGGGTAATGCCTTTAGGCAACAAGTGAAGCCAATAAGCATTCACAAAGCTCTT
GAAGTTTCAGACGCAGAATTCCTCGTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGGAGTCTCTGTTTGAGGCGCGCAAGTTTTCATAATCGTTTCTCCACGCAGATCTATCAAACCAGCATCGATTT
CATCTCTGCATTTTCAAATTCCTTTAACTTCTCGGAGTTAAGGAACTCACAAATCTGAAATAACGGCGCGGCGACTTTCACTGCCCGCGTTTTCTGTATTCCTGATCTTG
TTCTCTCTGCTCAACGATTCTGTTCTCTGTAAAACACTTAAACGAGATGTTAAAGCATTGAATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCATGGGTTGG
AGATGATCCGTGTGGCGATGGTGATCTTCCTGCTTGGTCCGGTGTCACTTGTTCTACTCAAGGAGATTACAGAGAGGGAAGTTTATGAGGTTTCTATTGTCGGACCGTTT
CCCACTGCTGTTACTAATCTCTTGGATCTTACTAGGCTGTTCTTGGACTACAACCAATTTAGTGGGAGAATTCCAGATGATTTTTACAAACATCCATTATTGAAAGAGAT
GTTCATCGAGGGTAATGCCTTTAGGCAACAAGTGAAGCCAATAAGCATTCACAAAGCTCTTGAAGTTTCAGACGCAGAATTCCTCGTTTAA
Protein sequenceShow/hide protein sequence
MRSRLLLAGEWCIHGLEMIRVAMVIFLLGPVSLVLLKEITEREVYEVSIVGPFPTAVTNLLDLTRLFLDYNQFSGRIPDDFYKHPLLKEMFIEGNAFRQQVKPISIHKAL
EVSDAEFLV