; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G011610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G011610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription termination factor MTEF1, chloroplastic
Genome locationCmo_Chr18:11800725..11801699
RNA-Seq ExpressionCmoCh18G011610
SyntenyCmoCh18G011610
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013135.1 Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.0e-16699.35Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        M+SRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHL+VDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTADG
        QSSTADG
Subjt:  QSSTADG

XP_022945324.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata]1.8e-167100Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTADG
        QSSTADG
Subjt:  QSSTADG

XP_022968085.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima]1.0e-16297.72Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        M+SRVQNLPP N FLFPRSS PSLNP+RNPNFRKPRFTISLNSQFSDHSDAGL FRQKILYLENHL+VDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTADG
        QSSTADG
Subjt:  QSSTADG

XP_023542512.1 transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo]1.1e-16498.7Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        M+SRVQNLPPWNLFLFPRSSAPSL  LRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHL+VDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTADG
        QSSTADG
Subjt:  QSSTADG

XP_038892906.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida]4.0e-14387.58Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        M+SR Q  PP   FLFPRSS  +L PLRNPNFRKPRF +SLN+QFSDHSDAGLLFR+KILYLENHLNVDFRKAFRENPDSRSATLS VKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYP+LLT++PDYDLYPIFDFLLNEVQIPFPDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVE TLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLE+LGLSH+DVVNMVLRSP LLTYSIQNNLV KV+YFL DMKGDL EL+ FPQYFSFSLERKIKPRHR LV+HGLSL LSKMLKVSDGEFTARL+EMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTAD
        QS TAD
Subjt:  QSSTAD

TrEMBL top hitse value%identityAlignment
A0A1S3BFK9 transcription termination factor MTEF1, chloroplastic5.3e-13381.43Show/hide
Query:  MMSRVQNLPP-WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMG
        M+SR+Q  PP   +F FP S A SL PL+NP+F KPRFT+SLN+QFSD SD+GLLFR+KILYLENHLNVD RKAFRENP  RSA+LS +KSVEVCLSSMG
Subjt:  MMSRVQNLPP-WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMG

Query:  LELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI
        L+ SAVGRVLDMYP+LLTS+PDYD+YPIFDFLLNEVQIPFPDI KSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL AIT QTTLLLVS+VEHTLLPKI
Subjt:  LELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI

Query:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMR
        Q+LE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSF+LERKIKPRHR LVEHGLSL LSKMLKVSDGEF A L EMR
Subjt:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMR

Query:  LQSSTAD
         +S  AD
Subjt:  LQSSTAD

A0A5D3D1U5 Transcription termination factor MTEF15.3e-13381.43Show/hide
Query:  MMSRVQNLPP-WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMG
        M+SR+Q  PP   +F FP S A SL PL+NP+F KPRFT+SLN+QFSD SD+GLLFR+KILYLENHLNVD RKAFRENP  RSA+LS +KSVEVCLSSMG
Subjt:  MMSRVQNLPP-WNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMG

Query:  LELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI
        L+ SAVGRVLDMYP+LLTS+PDYD+YPIFDFLLNEVQIPFPDI KSI+RCPR+LVSDLD QLRPALKFLRDLGFVGL AIT QTTLLLVS+VEHTLLPKI
Subjt:  LELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI

Query:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMR
        Q+LE+LGLSH+DVVNMVLRSP LLTYSIQNNLVPKV+YFLGDMKGDL EL+ FPQYFSF+LERKIKPRHR LVEHGLSL LSKMLKVSDGEF A L EMR
Subjt:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMR

Query:  LQSSTAD
         +S  AD
Subjt:  LQSSTAD

A0A6J1DAK3 transcription termination factor MTEF1, chloroplastic9.7e-14383.71Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDH------SDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVC
        M+SR+Q  PP  L LFPRSS PSL P  NPNFR PRFT+++N+QFS H      SD+G+LFR+KILYLENHL+VD RKAF++NPDSRSATLSA+KSVEVC
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDH------SDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVC

Query:  LSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHT
        LSSMGLELSAVGRVLDMYPQLLTSDP+YDLYPIFDFLLNEV+IPFPDIRKSI+RCPR+LVSDLDLQLRP L FLR+LGFVGLNAIT QTT+LLVSS+EHT
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHT

Query:  LLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTAR
        LLPKI+YLE+LG SHKDVVNMVLRSP LLTYSIQNNLVPKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSLSLS+MLKVSDGEFTAR
Subjt:  LLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTAR

Query:  LLEMRLQSSTADG
        ++EMRLQS+TADG
Subjt:  LLEMRLQSSTADG

A0A6J1G0M2 transcription termination factor MTEF1, chloroplastic8.7e-168100Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTADG
        QSSTADG
Subjt:  QSSTADG

A0A6J1HTW2 transcription termination factor MTEF1, chloroplastic4.9e-16397.72Show/hide
Query:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
        M+SRVQNLPP N FLFPRSS PSLNP+RNPNFRKPRFTISLNSQFSDHSDAGL FRQKILYLENHL+VDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL
Subjt:  MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
        ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQ

Query:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
        YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL
Subjt:  YLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRL

Query:  QSSTADG
        QSSTADG
Subjt:  QSSTADG

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic2.7e-1732.34Show/hide
Query:  MGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFV---GLNAITSQTTLLLVSSVEHT
        +G+    + R+L + P L   D +  + P   F L E+ IP   I   +V+ P LL + L  ++RP + FL     V    +  + +    LL  S+   
Subjt:  MGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFV---GLNAITSQTTLLLVSSVEHT

Query:  LLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTAR
        L P ++Y  +LG+    +  M+   P LL Y++ +NL PK  Y    M   L +L  FP++FS+SLER+I PRH ++VE+ ++  L  ML  +D EF  R
Subjt:  LLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTAR

Query:  L
        +
Subjt:  L

F4JVI3 Transcription termination factor MTERF5, chloroplastic3.6e-1728.43Show/hide
Query:  VKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLL
        +K     L ++G++ +   +++  +P +LT      L    +F L++  +    I + + RCP ++   ++ +LRP +++ R L  V +  +  +     
Subjt:  VKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLL

Query:  VSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVS
          S+E  L P  ++    G    ++  M+ R  AL T+S++ N++PK DYF   M    SEL +FPQ+F +SL+ +IKPR+ L+   G+ L L+++L +S
Subjt:  VSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVS

Query:  DGEF
          EF
Subjt:  DGEF

Q84X53 Transcription termination factor MTEF1, chloroplastic1.5e-8463.28Show/hide
Query:  SDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVR
        SD G+LFR+K++YL++ LNVD  KA R NP  RSA +S+V SVE  LSS GL   AVGR+LDM+P LLTSDP+ ++ P+  FL NE+ I   DI KSI R
Subjt:  SDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVR

Query:  CPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYL-ENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLS
        CPRLL+S +D QLRPAL FL+ LGFVG + ITS+ T+LLVS+VE TL+PKI+YL E LG + ++V  MV+RSPALLTYS+ NNLVPKV++F+ +M+GD+ 
Subjt:  CPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYL-ENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLS

Query:  ELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSS
        EL+RFPQYFSFSLERKIKPRHRLL EHG+ + LS+MLKVSDG+F   LLE+RL+S+
Subjt:  ELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSS

Q9FM80 Transcription termination factor MTERF9, chloroplastic1.4e-1829.12Show/hide
Query:  LSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFL-RDLGFV--GLNAITSQTTLLLVSSV
        L  +G+  S +G+++   P L +   +  L P   +L+ EV I   D+ K +   P++LV  LD+       FL ++LG     +  +  +   LL  S+
Subjt:  LSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFL-RDLGFV--GLNAITSQTTLLLVSSV

Query:  EHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVE
        +   LP+I +L ++G+ + D++ ++     +L+ S+++NL PK  Y + ++  ++  L ++P Y S SL+++I+PRHR LVE
Subjt:  EHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVE

Q9ZT96 Transcription termination factor MTERF4, chloroplastic5.0e-1126.64Show/hide
Query:  VKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYP----IFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQT
        +K +   L  +G+   A  R+++  P +L  + D  + P    + DF + E  +P       I + P ++  DL  +L    K L     +    + S  
Subjt:  VKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYP----IFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQT

Query:  TLL--LVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLS
          +   VS  E  +L  I +L   G S      MV+  P +L  ++   +    +YF  +MK  L +L  FP +F++ LE  +KPRH+ +++ G+  SL+
Subjt:  TLL--LVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLS

Query:  KMLKVSDGEFTARL
         ML  SD +F  R+
Subjt:  KMLKVSDGEFTARL

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein1.1e-8563.28Show/hide
Query:  SDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVR
        SD G+LFR+K++YL++ LNVD  KA R NP  RSA +S+V SVE  LSS GL   AVGR+LDM+P LLTSDP+ ++ P+  FL NE+ I   DI KSI R
Subjt:  SDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVR

Query:  CPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYL-ENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLS
        CPRLL+S +D QLRPAL FL+ LGFVG + ITS+ T+LLVS+VE TL+PKI+YL E LG + ++V  MV+RSPALLTYS+ NNLVPKV++F+ +M+GD+ 
Subjt:  CPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYL-ENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLS

Query:  ELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSS
        EL+RFPQYFSFSLERKIKPRHRLL EHG+ + LS+MLKVSDG+F   LLE+RL+S+
Subjt:  ELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSS

AT2G34620.1 Mitochondrial transcription termination factor family protein4.7e-5748.54Show/hide
Query:  LLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRL
        L  ++KIL LE  + +D  KA   NP   SA L +++SV   L S G+  + + R+L M P++LTSD   +LYP+F FL N++ +P    R+ I +CPRL
Subjt:  LLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRL

Query:  LVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRF
        L+S ++ QL+PAL +L+ LG   L A+  Q  +LLVSSVEHTL+PK+++LE++G S  + + M+LR PAL T+SI+NN  PK+DYF+ ++KG L  L+ F
Subjt:  LVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRF

Query:  PQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEF
        PQYF+FSLE++IKPRH   +E GL L LS MLK +D EF
Subjt:  PQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEF

AT2G36000.1 Mitochondrial transcription termination factor family protein6.0e-3636.3Show/hide
Query:  PSLNPLRNPNFRKPRF---TISLNSQFSDHSDAGLL----------------FRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSS--MGL
        PSL+ LR  NF    F   T S +S F    D   L                  +K++YL++ L +DF      +P   S  LSAV+SV   +++  +  
Subjt:  PSLNPLRNPNFRKPRF---TISLNSQFSDHSDAGLL----------------FRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSS--MGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQI-PFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI
         L    R++ M P+LLTS       P+  FLL EV +    D+R+++ R PRLL   +D QLRP L FL+ +G +       + T LL  SV++ L+P+I
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQI-PFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI

Query:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEF
         Y E LG S +    M  R P L  YSI  N  PK+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH      G+   L  MLK ++  F
Subjt:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEF

AT2G36000.2 Mitochondrial transcription termination factor family protein6.0e-3636.3Show/hide
Query:  PSLNPLRNPNFRKPRF---TISLNSQFSDHSDAGLL----------------FRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSS--MGL
        PSL+ LR  NF    F   T S +S F    D   L                  +K++YL++ L +DF      +P   S  LSAV+SV   +++  +  
Subjt:  PSLNPLRNPNFRKPRF---TISLNSQFSDHSDAGLL----------------FRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSS--MGL

Query:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQI-PFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI
         L    R++ M P+LLTS       P+  FLL EV +    D+R+++ R PRLL   +D QLRP L FL+ +G +       + T LL  SV++ L+P+I
Subjt:  ELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQI-PFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI

Query:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEF
         Y E LG S +    M  R P L  YSI  N  PK+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH      G+   L  MLK ++  F
Subjt:  QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEF

AT3G18870.1 Mitochondrial transcription termination factor family protein2.6e-3136.62Show/hide
Query:  LSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYD---LYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITS
        LS + S    L S G+      R++ + PQL +  P +D   L P+FDFL  E+     + R  IV CP +L SD++  LRP L +L++LG   LN  + 
Subjt:  LSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYD---LYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITS

Query:  QTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLS
            +L + VE  L  K+++L+++G  H++   +  R PA+  YS+++NL PK ++ + DM+ +L EL++FPQYF+FSL ++I+PRH  L +  + +SLS
Subjt:  QTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLS

Query:  KMLKVSDGEFTAR
        +ML   D +F ++
Subjt:  KMLKVSDGEFTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCAGAGTCCAAAATCTTCCTCCATGGAATCTCTTCCTCTTTCCTCGGTCCTCAGCCCCATCTCTTAACCCTCTGAGAAACCCTAATTTCAGAAAACCTCGGTT
CACCATTTCCCTCAATTCCCAATTCTCCGACCATTCCGACGCCGGCCTTCTTTTCCGGCAGAAGATACTCTACCTCGAGAATCACCTTAATGTCGATTTCCGGAAAGCAT
TCCGTGAAAACCCCGATTCTCGCTCCGCCACTCTCTCCGCCGTCAAGTCCGTTGAGGTTTGTCTCTCTTCCATGGGACTCGAGCTCTCTGCAGTCGGACGCGTCCTCGAC
ATGTACCCTCAGCTTCTCACTTCAGACCCGGACTATGATCTTTATCCTATCTTCGATTTCCTTCTCAATGAGGTTCAAATTCCATTTCCCGACATTCGGAAATCCATAGT
TCGATGTCCTAGACTTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGTTGAAGTTCTTGCGCGACCTAGGATTCGTTGGGTTGAATGCCATCACGTCCCAGACGA
CATTGCTACTAGTCTCGAGCGTTGAACATACGCTTCTACCCAAGATTCAGTACCTAGAAAATTTGGGCTTATCGCACAAGGATGTGGTTAATATGGTATTAAGGTCTCCG
GCGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGGATTATTTCTTAGGAGACATGAAGGGTGATTTATCGGAATTGAGAAGGTTTCCGCAATATTTTTC
GTTTAGTTTGGAGAGAAAGATTAAACCGCGCCATCGTTTATTAGTTGAGCATGGATTGTCACTTTCTTTGTCGAAAATGCTGAAGGTTAGTGATGGGGAGTTCACAGCAA
GGCTGTTAGAAATGCGTTTGCAGTCGTCGACGGCAGATGGTTGA
mRNA sequenceShow/hide mRNA sequence
TTCTCTTCTTCATCGTCTTCCTCCACAGGAAACAAATCTTCGGTGTCTGAAATGATGAGCAGAGTCCAAAATCTTCCTCCATGGAATCTCTTCCTCTTTCCTCGGTCCTC
AGCCCCATCTCTTAACCCTCTGAGAAACCCTAATTTCAGAAAACCTCGGTTCACCATTTCCCTCAATTCCCAATTCTCCGACCATTCCGACGCCGGCCTTCTTTTCCGGC
AGAAGATACTCTACCTCGAGAATCACCTTAATGTCGATTTCCGGAAAGCATTCCGTGAAAACCCCGATTCTCGCTCCGCCACTCTCTCCGCCGTCAAGTCCGTTGAGGTT
TGTCTCTCTTCCATGGGACTCGAGCTCTCTGCAGTCGGACGCGTCCTCGACATGTACCCTCAGCTTCTCACTTCAGACCCGGACTATGATCTTTATCCTATCTTCGATTT
CCTTCTCAATGAGGTTCAAATTCCATTTCCCGACATTCGGAAATCCATAGTTCGATGTCCTAGACTTCTCGTCTCCGACTTGGACCTTCAATTGCGACCTGCGTTGAAGT
TCTTGCGCGACCTAGGATTCGTTGGGTTGAATGCCATCACGTCCCAGACGACATTGCTACTAGTCTCGAGCGTTGAACATACGCTTCTACCCAAGATTCAGTACCTAGAA
AATTTGGGCTTATCGCACAAGGATGTGGTTAATATGGTATTAAGGTCTCCGGCGTTGTTGACTTATAGCATTCAAAACAATTTGGTTCCTAAAGTGGATTATTTCTTAGG
AGACATGAAGGGTGATTTATCGGAATTGAGAAGGTTTCCGCAATATTTTTCGTTTAGTTTGGAGAGAAAGATTAAACCGCGCCATCGTTTATTAGTTGAGCATGGATTGT
CACTTTCTTTGTCGAAAATGCTGAAGGTTAGTGATGGGGAGTTCACAGCAAGGCTGTTAGAAATGCGTTTGCAGTCGTCGACGGCAGATGGTTGA
Protein sequenceShow/hide protein sequence
MMSRVQNLPPWNLFLFPRSSAPSLNPLRNPNFRKPRFTISLNSQFSDHSDAGLLFRQKILYLENHLNVDFRKAFRENPDSRSATLSAVKSVEVCLSSMGLELSAVGRVLD
MYPQLLTSDPDYDLYPIFDFLLNEVQIPFPDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKIQYLENLGLSHKDVVNMVLRSP
ALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFSLERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG