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CmoCh18G011690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G011690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:11824321..11828217
RNA-Seq ExpressionCmoCh18G011690
SyntenyCmoCh18G011690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8087626.1 hypothetical protein EE612_011987 [Oryza sativa]7.8e-1251.09Show/hide
Query:  PTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHGSK
        PTKKRT T P  TA YCI V R+AI  LKLFAVEK P+KRS                  F+ SSDVG+PLA    + KSP+  TS+T+H SK
Subjt:  PTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHGSK

TrEMBL top hitse value%identityAlignment
A0A0A9CP36 Uncharacterized protein2.2e-1252.63Show/hide
Query:  LTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNGF----------------AESSDVGKPLARTEINFKSPEIFTSLTSHGSK
        L  PTK RTAT P+ T  YCIQV R AIR LKLFAVEK PMKRS                   ++SS VG+PLA T+ N  SP I TS T+ GSK
Subjt:  LTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNGF----------------AESSDVGKPLARTEINFKSPEIFTSLTSHGSK

A0A0E0CME7 Uncharacterized protein4.9e-1249.02Show/hide
Query:  KLRVHAKLTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHG
        KLRV  +   PTK RT T P  TA YCI V R+AI  LKLFAVEK P+KRS                  F+ SSDVG+PLA    + KSP+  TS+T+H 
Subjt:  KLRVHAKLTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHG

Query:  SK
        SK
Subjt:  SK

A0A0E0CME8 Uncharacterized protein4.9e-1249.02Show/hide
Query:  KLRVHAKLTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHG
        KLRV  +   PTK RT T P  TA YCI V R+AI  LKLFAVEK P+KRS                  F+ SSDVG+PLA    + KSP+  TS+T+H 
Subjt:  KLRVHAKLTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHG

Query:  SK
        SK
Subjt:  SK

A0A0P0VKT7 Os02g0577400 protein3.8e-1251.09Show/hide
Query:  PTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHGSK
        PTKKRT T P  TA YCI V R+AI  LKLFAVEK P+KRS                  F+ SSDVG+PLA    + KSP+  TS+T+H SK
Subjt:  PTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHGSK

Q0E053 Os02g0577400 protein3.8e-1251.09Show/hide
Query:  PTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHGSK
        PTKKRT T P  TA YCI V R+AI  LKLFAVEK P+KRS                  F+ SSDVG+PLA    + KSP+  TS+T+H SK
Subjt:  PTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNG----------------FAESSDVGKPLARTEINFKSPEIFTSLTSHGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGTCTGATGTCAAAGGCATCTTCACTCTTTGGGTTCCAGTCAAAGCCATTTAACTTCCCCACCTTGGAAATAATGCAAAAAAGAGAAGCAAGAACTTCATCCAC
TCGAACAAAGGCATCATCATCTGTCTTCATGATATACTTCGCTGAAGCAATCTCTGCCTGTCAAAGCAGCGAGATTGTTATCTTGAATCATATGATAAATTCACATCATT
TAGTGAAAGAACGGATCTTTACCCCGAAGATGCAGATACCCAACGTTTTCCAGGCTTCTCGAGCAGCTCACTCAACTTCACTTGAAAACATTATGAGCAGACTTAGAAGT
GGCCTCAAGATAAATTTGGGAAATAAATTAAGAGTACATGCGAAGCTCACCAACCCAACAAAGAAGCGAACTGCAACAGACCCTGACTGTACTGCAGGATACTGCATCCA
GGTTCTCCGAATGGCCATCCGATATTTAAAATTGTTTGCTGTGGAGAAAACACCAATGAAAAGATCCAATGGTTTTGCCGAATCCTCGGATGTGGGCAAACCACTAGCCA
GGACAGAAATTAATTTCAAGTCTCCTGAAATCTTCACTTCACTGACCAGCCATGGCTCCAAAAATCAGGGGATGGACATCGCTCCTCATCTCCCCAATCATGAGAAACTG
TCCAGTTGGAACTGCAGGATTGAGCCACTGAAGAGGATCAACGGAATTGTACAAGGGCGTTGCATAATAATTTTGCCGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGGTCTGATGTCAAAGGCATCTTCACTCTTTGGGTTCCAGTCAAAGCCATTTAACTTCCCCACCTTGGAAATAATGCAAAAAAGAGAAGCAAGAACTTCATCCAC
TCGAACAAAGGCATCATCATCTGTCTTCATGATATACTTCGCTGAAGCAATCTCTGCCTGTCAAAGCAGCGAGATTGTTATCTTGAATCATATGATAAATTCACATCATT
TAGTGAAAGAACGGATCTTTACCCCGAAGATGCAGATACCCAACGTTTTCCAGGCTTCTCGAGCAGCTCACTCAACTTCACTTGAAAACATTATGAGCAGACTTAGAAGT
GGCCTCAAGATAAATTTGGGAAATAAATTAAGAGTACATGCGAAGCTCACCAACCCAACAAAGAAGCGAACTGCAACAGACCCTGACTGTACTGCAGGATACTGCATCCA
GGTTCTCCGAATGGCCATCCGATATTTAAAATTGTTTGCTGTGGAGAAAACACCAATGAAAAGATCCAATGGTTTTGCCGAATCCTCGGATGTGGGCAAACCACTAGCCA
GGACAGAAATTAATTTCAAGTCTCCTGAAATCTTCACTTCACTGACCAGCCATGGCTCCAAAAATCAGGGGATGGACATCGCTCCTCATCTCCCCAATCATGAGAAACTG
TCCAGTTGGAACTGCAGGATTGAGCCACTGAAGAGGATCAACGGAATTGTACAAGGGCGTTGCATAATAATTTTGCCGAGTTGA
Protein sequenceShow/hide protein sequence
MPGLMSKASSLFGFQSKPFNFPTLEIMQKREARTSSTRTKASSSVFMIYFAEAISACQSSEIVILNHMINSHHLVKERIFTPKMQIPNVFQASRAAHSTSLENIMSRLRS
GLKINLGNKLRVHAKLTNPTKKRTATDPDCTAGYCIQVLRMAIRYLKLFAVEKTPMKRSNGFAESSDVGKPLARTEINFKSPEIFTSLTSHGSKNQGMDIAPHLPNHEKL
SSWNCRIEPLKRINGIVQGRCIIILPS