CuGenDBv2

Gene ID	CmoCh18G012450
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome location	Cmo_Chr18:12260626..12267441
RNA-Seq Expression	CmoCh18G012450
Synteny	CmoCh18G012450
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574156.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-157

97.95

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFRAKNGSKSP+ITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+SGGS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

KAG7013210.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

8.0e-157

97.6

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Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFR KNGSKSP+ITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+SGGS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

XP_022945332.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata]

1.0e-159

99.66

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Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

XP_022968395.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucurbita maxima]

5.2e-156

97.6

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Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDIS GS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

3.6e-157

97.95

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSST RFRAKNGSKSPVITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISG DLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

6.2e-131

85.21

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        M  +I SP PL +L+S   FRAK+  K+P I+ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFL+GAVPSGEATLPEG EQIF+LSQ VSDN+K+D+AWATYILLRNTNSISVLIQ QG LCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN
        LQSIGLSAL DA+YFPQISESGLWQMLPKGTRSVLVQPV QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

1.6e-131

84.67

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        M+ +ILSP+PLIRL+STPRFRAK   K+P ++ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GS+SAAP T AQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LG+SLAAFSIALPYLGKFL+GAVPSGEA+LPEG EQIFVLSQ+VSDNVK+DLAWATYILLRNTNSISVLIQI+GELCVRGYWNSPNDI GADL+AWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI
        LQSIGLSALND LYFPQIS+S LW+MLP GTRSVLVQPV     QSGN+MEKIGGFIL+ASSLSYAFSDKDRAWIRALA KF + DI
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

4.9e-160

99.66

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

A0A6J1HX31 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2

2.5e-156

97.6

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK
        LQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDIS GS+
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

A0A6J1HXW3 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

1.2e-155

97.93

Show/hide

Query:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
        MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSP+RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA
Subjt:  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEA

Query:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ
        LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRGYWNSPNDISGADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQ

Query:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGG
        LQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDIS G
Subjt:  LQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGG

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

6.7e-82

58.89

Show/hide

Query:  PRFRAK-NGSKSPVITARLD-DSKNSPS--RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALP
        P+F  +    +S  I AR + DS  S +  +QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   S++API+ +Q+R+EALG+SLAAFSIALP
Subjt:  PRFRAK-NGSKSPVITARLD-DSKNSPS--RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALP

Query:  YLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDAL
        Y+GKFL+G+V   + +LPE  EQ+FV+S ++ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF++++  IGL+ + + L
Subjt:  YLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDAL

Query:  YFPQISESGL-WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF
        YFPQ + S L   +LP GTRS+ VQP+ QN     NE +K+ GF+LVAS+  YA+SDKDRAWI A+A KF
Subjt:  YFPQISESGL-WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

4.8e-83

58.89

Show/hide

Query:  PRFRAK-NGSKSPVITARLD-DSKNSPS--RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALP
        P+F  +    +S  I AR + DS  S +  +QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   S++API+ +Q+R+EALG+SLAAFSIALP
Subjt:  PRFRAK-NGSKSPVITARLD-DSKNSPS--RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALP

Query:  YLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDAL
        Y+GKFL+G+V   + +LPE  EQ+FV+S ++ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF++++  IGL+ + + L
Subjt:  YLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDAL

Query:  YFPQISESGL-WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF
        YFPQ + S L   +LP GTRS+ VQP+ QN     NE +K+ GF+LVAS+  YA+SDKDRAWI A+A KF
Subjt:  YFPQISESGL-WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF

AT5G52110.2 Protein of unknown function (DUF2930)

4.8e-83

58.89

Show/hide

Query:  PRFRAK-NGSKSPVITARLD-DSKNSPS--RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALP
        P+F  +    +S  I AR + DS  S +  +QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   S++API+ +Q+R+EALG+SLAAFSIALP
Subjt:  PRFRAK-NGSKSPVITARLD-DSKNSPS--RQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALP

Query:  YLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDAL
        Y+GKFL+G+V   + +LPE  EQ+FV+S ++ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF++++  IGL+ + + L
Subjt:  YLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDAL

Query:  YFPQISESGL-WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF
        YFPQ + S L   +LP GTRS+ VQP+ QN     NE +K+ GF+LVAS+  YA+SDKDRAWI A+A KF
Subjt:  YFPQISESGL-WQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAATGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGA
TTCTAAGAACTCGCCCAGTCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTG
GTTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATT
GCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGTGCCGAGCAAATATTTGTCTTGTCACAAAGTGTATCGGATAA
TGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACAGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATA
GTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATGCCCTCTATTTTCCTCAAATTTCAGAA
TCTGGACTTTGGCAAATGCTGCCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGATTCAT
ATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGGGGGGAAGTAAGTAAT
AAATCTCCAATATAGTTTTTGGTTATTGACGTGCCTTTCTCAGAAGTCATGAGCATGGTACTGATACTCACTTTTACCAATAAAATAGAGAATGTTACTATTTTTTTTAG
TTCAACAATCTTATTGACGCCCATTTCTTAGAGCTCACTAAGCTTTGCATTGATTGACGTACAAAAATTACTTTTTGATGCAACTGTTTCGAGCAAGACATGGAAAGAAC
AGAAACGTGACGCATTGTCTTTGGGCCAAAATCTATGAGTATATTTTCTATGAACCTGCCTGTAACGGCCCAAACTCACCGCTAGCAGATACGGTCCTCTTTGAGCTTTT
TCTTTCGTGTTTTCCCTCAAAGTTTTTTAAGATGCGTCTACGAGGGAGAAGTGTCCACATCCTTATAAAGGGTGTTTCCTTCTCCTCCCCATCCGATGTGGGATCTTACC
ATCCACCCCCTTCGGAGTTCTAGCGTCCTTGCTGGCACTCGTTCCCTTTTCCAATTGATGTGGGATCCCCCAATCCACTCCCATTTGAGGCCCAGTGTCCTAGTGTCCTT
GTTGGCACACCGTCTCATGTCCACCCCTTTTGGGGCTCAGCCTCCTCGCTGACACATCGCCCGGTATCTAGCTTTGATATCATTTGTAATGGCCCAAACCCGCCGCTAAC
GGATGTTGTCCTCTTTGGGCTTTCCTTTTCGGACTTCCGCTTATTGCGAAAATGATTTTGTTCTAAATTCTCTTTTATTTATACCTAATGAAGTAAATTCTTGGAATAAA
ATTTGGAGTATCCTGCGCCTAGTTGGTACATGTTGCCATTCGCGCTTGGACATCCAAACGAATGCTTGTTACGAATTTGTATAGAACAGAAGCTTAGCAGATCTTAGCAT
GATAATTTGGACATGATGCAGCATCAACATCTATTTAGAGCCTTTGATTTCTTGGGCTGATCTGCTGAACTCAACTCTTTTTCCTCAAATCTAATTTGTTGGGGTGAAAA
TGTAAGAATCTATTAGAATCTGTATGTTTGCGCGAAGAAAAATGTACATGAAAGAATATATGAAGAACAAATGAGGTCATACAAGTATCACAGTGACCCTTTTTAGAGGT
ACCCTTCTTTAAGAACTATAATTTAATTTCTCCATGTACACAAGGAAAATGAAAAACAAAAAGTTATCTTTCAATTCTCTCTAACTTGAGCTCCTGACTCTTCTTTTTGT
TATCAGGTCGAAAGGTCACTCCGTCCAATGAACAACGGAGATGAAGTTTCAGATTGAGCTACTAGGAGAGAGCCTTCGAAGCCTTCTAAAAATTTCTCCCAGCCGTATAC
CAGATTCTGCCAAAGTAGCACAGAAAGGCGATAGTTTGACACAATACAGGATGAAGATCATTCAAGAAAATTTGAGGTGCATATACTGACGTGTGTTTAGGAAAAAAGGA
GAAATAAGCAAGCGAGTCTTTTTCTAAATGGGCTTCTGAGTTTGATGTCTTAGTCATCAACACGTGAAGCACATGAATAAGATAGCTATACGAGGTGAAAGTAAAGAGAA
TAAAAGCAGTTCTGGCCCAAGTTTGAGAGGTTGTTAGCTATTTGAGATGCATCTGAAGATGGCACATCCTGTCACCAAAAAATCTCAACGTTGCAGTAATGGGAGGAAGC
TGAAATTGCTACTCGCTGGAGAAGGATAGAACCAATGGACTGAGTTGGGTTGACAAGCCAACCCTCCTGTGACCAAATCCATTAAAGCATTCACACACGAGAGAGTTTTG
TTAAGAACCACGACCCTCCACAATGGAACATAAACCTCACTTCTCATACCAAATGAAGTTGCCTAAATTGAAAAAAGAAACAAGGCAAAGATGAAGATTTGGGTCTCGAA
TATTTGCAGAGGAGATAGAAGGGCCCATCAGAGAAAAGAAAAAAAAAAGTTTGATGTTTGCCAAATGGGGAAGAAAGATGAAGATGCTACCTGCTTCACGTTCTCATATA
CTTTAGAAGATCAGCAAAAACACAGTGAGGAGAGAAATGAAACTGTGGGGTTTCATTAAAAAAGAAAAGAGACCCAGGGCCGCCATTGTTGTTGTTGAACAAAACAATGA
GAGTTATTGCAGGTGAGTGTGGGGTTACCTTGATATTACTCTGAAGAGAAGCGAATTCAAGATGTGATTGTGGGTTGCTTGAGTTTTTTATACACTGTAAAGGGAATGAG
CAAGCCAAGCCAGGGCCGCCATTGTTGTTGGTTTCCAAGCTCTGTTTCTTCTCTAATTTCCCAAAGAAGATAAGCCCATTTGTAATTGCAAATTCGAGGTCATGCGAAAG
CGACAGGATCAC

Protein sequence

Show/hide protein sequence

MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSI
ALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISE
SGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSK

CmoCh18G012450 (gene) of Cucurbita moschata (Rifu) v1 genome