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CmoCh18G012460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G012460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description4-hydroxy-tetrahydrodipicolinate reductase
Genome locationCmo_Chr18:12262957..12263800
RNA-Seq ExpressionCmoCh18G012460
SyntenyCmoCh18G012460
Gene Ontology termsGO:0009089 - lysine biosynthetic process via diaminopimelate (biological process)
GO:0019877 - diaminopimelate biosynthetic process (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase (molecular function)
InterPro domainsIPR023940 - Dihydrodipicolinate reductase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AQX44122.1 4-hydroxy-tetrahydrodipicolinate reductase [Apostasia odorata]1.1e-1184.09Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S +GEVYTL+HD+TNVQCL+PGLL+AIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

CAA3001677.1 dihydrodipicolinate reductase CRR1, chloroplastic [Olea europaea subsp. europaea]1.1e-1186.36Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GEVYTLKHDVT+VQCL+PGL+LAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

CAA3001678.1 dihydrodipicolinate reductase CRR1, chloroplastic [Olea europaea subsp. europaea]1.1e-1186.36Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GEVYTLKHDVT+VQCL+PGL+LAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

KAG7013209.1 Dihydrodipicolinate reductase-like protein CRR1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-1292.5Show/hide
Query:  EVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        EVYTLKHDVTNVQCL+PGLLLAIRKVVRL+NLVYGWEK L
Subjt:  EVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

XP_028806274.1 dihydrodipicolinate reductase-like protein CRR1, chloroplastic [Prosopis alba]1.5e-1184.09Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GE+YTLKHD+TNVQCL+PGLLLAIR+VVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

TrEMBL top hitse value%identityAlignment
A0A0A0L5T6 Uncharacterized protein9.3e-1286.36Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GEVYTLKHD+ NVQCL+PGLLLAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

A0A0F7H0U3 Dihydrodipicolinate reductase-like protein (Fragment)4.2e-1286.36Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GEVYT+KHD+TNVQCL+PGLLLAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

A0A1S6YFS6 4-hydroxy-tetrahydrodipicolinate reductase5.4e-1284.09Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S +GEVYTL+HD+TNVQCL+PGLL+AIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

A0A444XW33 Uncharacterized protein9.3e-1281.82Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GE+Y++KHD+TNVQCL+PGLLLAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

A0A444XW37 Dihydrodipicolinate reductase-like protein9.3e-1281.82Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S  GE+Y++KHD+TNVQCL+PGLLLAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

SwissProt top hitse value%identityAlignment
B2J0A9 4-hydroxy-tetrahydrodipicolinate reductase6.0e-0859.52Show/hide
Query:  SGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        +G++YTL+HD ++  C +PG+LLAIRKV+ LK+LVYG EK L
Subjt:  SGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

Q3MFY8 4-hydroxy-tetrahydrodipicolinate reductase4.6e-0860.98Show/hide
Query:  GEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        G++YTL+HD ++  C +PG+LLAIRKV++LK+LVYG EK L
Subjt:  GEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

Q8DHH2 4-hydroxy-tetrahydrodipicolinate reductase4.6e-0860.98Show/hide
Query:  GEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        G++YTL+HD ++ QC +PG+LLAIRKV +LK L+YG EK L
Subjt:  GEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

Q8YU19 4-hydroxy-tetrahydrodipicolinate reductase4.6e-0860.98Show/hide
Query:  GEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        G++YTL+HD ++  C +PG+LLAIRKV++LK+LVYG EK L
Subjt:  GEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

Q9FJ82 Dihydrodipicolinate reductase-like protein CRR1, chloroplastic1.2e-1175Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S+ G+VYT+KHD+ +V+ L+PGLLLAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL

Arabidopsis top hitse value%identityAlignment
AT5G52100.1 Dihydrodipicolinate reductase, bacterial/plant8.3e-1375Show/hide
Query:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL
        S+ G+VYT+KHD+ +V+ L+PGLLLAIRKVVRLKNLVYG EKFL
Subjt:  STSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTCTGGAGAGGTTTACACTCTCAAACATGATGTTACAAATGTGCAATGTCTAGTACCAGGCTTGTTATTGGCAATTAGAAAGGTGGTGCGTCTTAAGAATCT
GGTATACGGCTGGGAGAAATTTTTAGAAGGCTTCGAAGGCTCTCTCCTAGTAGCTCAATCTGAAACTTCATCTCCGTTGTTCATTGGACGGAGTGACCTTTCGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTTCTGGAGAGGTTTACACTCTCAAACATGATGTTACAAATGTGCAATGTCTAGTACCAGGCTTGTTATTGGCAATTAGAAAGGTGGTGCGTCTTAAGAATCT
GGTATACGGCTGGGAGAAATTTTTAGAAGGCTTCGAAGGCTCTCTCCTAGTAGCTCAATCTGAAACTTCATCTCCGTTGTTCATTGGACGGAGTGACCTTTCGACCTGAT
AACAAAAAGAAGAGTCAGGAGCTCAAGTTAGAGAGAATTGAAAGATAACTTTTTGTTTTTCATTTTCCTTGTGTACATGGAGAAATTAAATTATAGTTCTTAAAGAAGGG
TACCTCTAAAAAGGGTCACTGTGATACTTGTATGACCTCATTTGTTCTTCATATATTCTTTCATGTACATTTTTCTTCGCGCAAACATACAGATTCTAATAGATTCTTAC
ATTTTCACCCCAACAAA
Protein sequenceShow/hide protein sequence
MSTSGEVYTLKHDVTNVQCLVPGLLLAIRKVVRLKNLVYGWEKFLEGFEGSLLVAQSETSSPLFIGRSDLST