CuGenDBv2

Gene ID	CmoCh18G012670
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	25.3 kDa vesicle transport protein isoform X1
Genome location	Cmo_Chr18:12348859..12350277
RNA-Seq Expression	CmoCh18G012670
Synteny	CmoCh18G012670
Gene Ontology terms	GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0048280 - vesicle fusion with Golgi apparatus (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005793 - endoplasmic reticulum-Golgi intermediate compartment (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031201 - SNARE complex (cellular component) GO:0005484 - SNAP receptor activity (molecular function)
InterPro domains	IPR010908 - Longin domain IPR011012 - Longin-like domain superfamily IPR044565 - Vesicle-trafficking protein Sec22

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008439222.1 PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo]

2.8e-103

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILKEISRG LSPPKMVI MHHHSFIYL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KF
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN----SSSIWSFSIVKEIGLKWT
        DDAL+N L+KPYSFLKFD+II N+RK+YIDTRTQVNL KLN  R Q D D+++CSF EI ERRRK+ D  ERS CN N    SSSIW    ++EIGLKWT
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN----SSSIWSFSIVKEIGLKWT

Query:  PVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLF
        P+VVTFGVVL++LWASFLLFDISLSHHNQFVILYNNRKLF
Subjt:  PVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLF

XP_022944814.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]

5.8e-157

100

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Query:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
        MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
Subjt:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ

Query:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
        MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
Subjt:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF

Query:  EIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
        EIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
Subjt:  EIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH

XP_022944815.1 25.3 kDa vesicle transport protein isoform X2 [Cucurbita moschata]

5.0e-116

100

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Query:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
        MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
Subjt:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ

Query:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
        MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
Subjt:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF

Query:  EIFERRRKIT
        EIFERRRKIT
Subjt:  EIFERRRKIT

XP_022968542.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]

2.7e-122

94.94

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALS PKM IQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVV
        DDALLNSLVKPYSF KFDNII NIRKRYIDTRTQVNLYKLND R QTDLD+VTCS  EIFERRRKITD  ERSICNANSSSIWSFS VKEIGLKWTPVVV
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVV

Query:  TFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
        TFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
Subjt:  TFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH

XP_023541413.1 25.3 kDa vesicle transport protein [Cucurbita pepo subsp. pepo]

2.0e-125

90.76

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Query:  MRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIH
        MRGFT+EKV+LNMVKLTMVGRVRDGVPLAQGIRYVNEE DDVLGYKQQAEFILK+ISRGALS PKM IQMHHHSFIYL+ENGVCYMTLCDSLYPRKLAIH
Subjt:  MRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIH

Query:  YLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIV
        YLQDLQREFSKFDDALLNSLVKPYS+ KFDNII NIRKRYIDTRTQ NLYKLND RGQ DLDM+TCSF EIFERRRKITD  ERSICNANSSSIWS+S +
Subjt:  YLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIV

Query:  KEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
        KEIGLKWTP+VVTFG VLVLLWASFLLFDISL+HHNQFVILYNNRKLFH
Subjt:  KEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBE2 Longin domain-containing protein

1.4e-100

78.1

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILKEISRG LSPPKMVI MHHHSFIYL+ENGVCYMTLCDS YPRKLAIHYLQDLQ+EF KF
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICN------ANSSSIWSFSIVKEIGLK
        DDAL+N L+KPYSFLKFD+II N+RK+YIDTRTQ NL KLN  R Q D D+ TCS  EI ERRRK  D  ERS  N       NS SIW    ++EIG+K
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICN------ANSSSIWSFSIVKEIGLK

Query:  WTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLF
        WTP+VVTFGVVL++LWASFLLFDISLSHHNQFVILYNNRKLF
Subjt:  WTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLF

A0A1S3AYX3 25.3 kDa vesicle transport protein isoform X1

1.4e-103

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILKEISRG LSPPKMVI MHHHSFIYL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KF
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN----SSSIWSFSIVKEIGLKWT
        DDAL+N L+KPYSFLKFD+II N+RK+YIDTRTQVNL KLN  R Q D D+++CSF EI ERRRK+ D  ERS CN N    SSSIW    ++EIGLKWT
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN----SSSIWSFSIVKEIGLKWT

Query:  PVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLF
        P+VVTFGVVL++LWASFLLFDISLSHHNQFVILYNNRKLF
Subjt:  PVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLF

A0A6J1FZ49 25.3 kDa vesicle transport protein isoform X2

2.4e-116

100

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Query:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
        MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
Subjt:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ

Query:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
        MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
Subjt:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF

Query:  EIFERRRKIT
        EIFERRRKIT
Subjt:  EIFERRRKIT

A0A6J1FZ74 25.3 kDa vesicle transport protein isoform X1

2.8e-157

100

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Query:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
        MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ
Subjt:  MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQ

Query:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
        MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF
Subjt:  MHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFF

Query:  EIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
        EIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
Subjt:  EIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH

A0A6J1HTS6 25.3 kDa vesicle transport protein isoform X1

1.3e-122

94.94

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALS PKM IQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVV
        DDALLNSLVKPYSF KFDNII NIRKRYIDTRTQVNLYKLND R QTDLD+VTCS  EIFERRRKITD  ERSICNANSSSIWSFS VKEIGLKWTPVVV
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIGLKWTPVVV

Query:  TFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
        TFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH
Subjt:  TFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH

SwissProt top hits

e value

%identity

Alignment

O08547 Vesicle-trafficking protein SEC22b

1.2e-22

37.59

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++    +F Y+IE GVCY+ LC++ +P+KLA  YL+DL  EF + 
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN
            + ++ +PYSF++FD  I   +K YID+R + NL  +N
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN

Q5RAI9 Vesicle-trafficking protein SEC22b

1.2e-22

37.59

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++    +F Y+IE GVCY+ LC++ +P+KLA  YL+DL  EF + 
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN
            + ++ +PYSF++FD  I   +K YID+R + NL  +N
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN

Q5ZJW4 Vesicle-trafficking protein SEC22b

4.0e-23

38.3

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++    +F Y+IE GVCY+ LC++ +P+KLA  YL+DLQ EF + 
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN
            + ++ +PYSF++FD  I   +K YID+R + NL  +N
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN

Q6P7L4 Vesicle-trafficking protein SEC22b

3.0e-23

39.01

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++    +F YLIE GVCY+ LC++ +P+KLA  YL+DL  EF + 
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN
            + ++ +PYSF++FDN I   +K YID+R + NL  +N
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLN

Q94AU2 25.3 kDa vesicle transport protein

7.2e-33

37.21

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVK+T++ RV DG+PLA+G+    +  D  + YKQQ + + K +SRG     +M ++   + F Y+IE  VCY+T+CD  YP+KLA  YL+DL+ EF + 
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIG-----LKW
        +   + +  +PY+F+KFD  I   +K Y DTRTQ N+ KLND   +    ++T +  E+     K+   +E S    + S I++    K++       KW
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIG-----LKW

Query:  TPVVVTFGVVLVLLW
         PV + FGVV +L W
Subjt:  TPVVVTFGVVLVLLW

Arabidopsis top hits

e value

%identity

Alignment

AT1G11890.1 Synaptobrevin family protein

5.1e-34

37.21

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Query:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF
        MVK+T++ RV DG+PLA+G+    +  D  + YKQQ + + K +SRG     +M ++   + F Y+IE  VCY+T+CD  YP+KLA  YL+DL+ EF + 
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKF

Query:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIG-----LKW
        +   + +  +PY+F+KFD  I   +K Y DTRTQ N+ KLND   +    ++T +  E+     K+   +E S    + S I++    K++       KW
Subjt:  DDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNANSSSIWSFSIVKEIG-----LKW

Query:  TPVVVTFGVVLVLLW
         PV + FGVV +L W
Subjt:  TPVVVTFGVVLVLLW

AT5G52270.1 SNARE-like superfamily protein

3.5e-43

55.42

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Query:  MVKLTMVGRVRDGVPLAQGIRYVN-EENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSK
        MVKLT+VGRV DG+PLAQ   YVN E+N   L YKQQAEF+LK++S+ +L  PKM I + HHSF +L+E  +CY+ L DS YPRKL  +YLQ+L +E  K
Subjt:  MVKLTMVGRVRDGVPLAQGIRYVN-EENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSK

Query:  FDD-ALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRR
         D+ AL+  + KPYSF++F  II  IRK+YIDTRTQ NL KLN  R Q +LD+VT    +I +R++
Subjt:  FDD-ALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCGAACATCACGTGTCCAAAATAGAATATTTACGAATACCCTTCATTTGGAACAACTTAATGAGCAAGTTGTTTAAGTTTTGGTATAAAATGAGAGGCTTCACAAG
CGAGAAAGTGAGATTAAACATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGAGTGCCACTTGCACAAGGCATTAGGTATGTCAATGAAGAGAATGACGATGTTT
TGGGGTACAAACAGCAAGCTGAGTTCATACTCAAAGAGATCTCTAGAGGGGCTTTGTCACCTCCAAAAATGGTCATTCAAATGCATCATCACTCTTTCATTTACTTGATC
GAGAACGGAGTGTGTTACATGACGTTATGCGATTCTTTGTACCCAAGAAAGCTGGCTATCCATTACTTGCAAGATCTGCAAAGGGAGTTTTCCAAGTTTGATGATGCCCT
ACTAAACAGCCTTGTCAAACCCTATAGTTTCCTCAAATTTGATAATATTATTATCAATATTAGGAAGCGATACATTGATACAAGAACACAAGTCAATCTATACAAGCTCA
ATGATGGGCGTGGCCAAACTGATCTAGACATGGTCACTTGTTCGTTCTTTGAAATTTTTGAAAGAAGGAGAAAGATAACGGATAGAGCGGAAAGATCAATTTGTAATGCA
AATTCCTCTTCCATTTGGAGCTTTTCAATTGTCAAGGAAATTGGGTTGAAATGGACGCCAGTGGTTGTAACTTTTGGTGTAGTGCTTGTACTTTTATGGGCTTCCTTTCT
TCTCTTCGACATCTCATTATCTCATCATAATCAATTTGTAATTCTATATAACAATAGAAAATTGTTTCACTAA

mRNA sequence

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Protein sequence

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MIEHHVSKIEYLRIPFIWNNLMSKLFKFWYKMRGFTSEKVRLNMVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHHHSFIYLI
ENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNA
NSSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKLFH

CmoCh18G012670 (gene) of Cucurbita moschata (Rifu) v1 genome