CuGenDBv2

Gene ID	CmoCh18G013030
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF3464)
Genome location	Cmo_Chr18:12496259..12496828
RNA-Seq Expression	CmoCh18G013030
Synteny	CmoCh18G013030
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574203.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-100

97.91

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGG--DDDEIPEAVAKRIITRI
        MKALVCSFRHALHLSKPPPWKQRSRIDDST TKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGG  DDDEIPEAVAKRIITRI
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGG--DDDEIPEAVAKRIITRI

Query:  LAFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        LAFVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  LAFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

KAG7013265.1 putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.8e-100

97.88

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
        MKALVCSFRHAL LSKPPPWKQRSRIDDST TKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGG DDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA

Query:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

XP_022944901.1 uncharacterized protein PAM68-like [Cucurbita moschata]

1.6e-102

100

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
        MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA

Query:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

XP_022968628.1 uncharacterized protein PAM68-like [Cucurbita maxima]

3.3e-95

95.24

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
        MKALVCSFRHAL LSKPPPWKQRSRID+STTTKNLR+FT TSRGQIQLNAKGFTGSPATAKDRETAVKK S QNNSRD GGDDDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA

Query:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGG+
Subjt:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

XP_023541387.1 uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]

1.1e-98

97.89

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSR-DGGGDDDEIPEAVAKRIITRIL
        MKALVCSFRHAL LSKPPPWKQRSRIDDST TKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSR  GGGDDDEIPEAVAKRIITRIL
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSR-DGGGDDDEIPEAVAKRIITRIL

Query:  AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZ57 uncharacterized protein PAM68-like

3.9e-70

74.87

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Query:  MKALVCSFRHALHLSKPPPWKQRS-RIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRIL
        MK+  CSFR AL L KPPP  QR+  I+DST TKNL  FT TSRGQ+Q+NAKGFTGSPATAK+RETA K  SGQNN+ D   DDDEIPEAV  RIITRIL
Subjt:  MKALVCSFRHALHLSKPPPWKQRS-RIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRIL

Query:  AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR
        AFVG+PMAFGVTL+KI +A+ EQ LW VPIW+PF T FLTFGASTMGIAYGTLSTSLDPEK+G++ GW+EAQKNWVEMWKEEDE +R
Subjt:  AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

3.9e-70

74.87

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Query:  MKALVCSFRHALHLSKPPPWKQRS-RIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRIL
        MK+  CSFR AL L KPPP  QR+  I+DST TKNL  FT TSRGQ+Q+NAKGFTGSPATAK+RETA K  SGQNN+ D   DDDEIPEAV  RIITRIL
Subjt:  MKALVCSFRHALHLSKPPPWKQRS-RIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRIL

Query:  AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR
        AFVG+PMAFGVTL+KI +A+ EQ LW VPIW+PF T FLTFGASTMGIAYGTLSTSLDPEK+G++ GW+EAQKNWVEMWKEEDE +R
Subjt:  AFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR

A0A6J1CGP3 uncharacterized protein PAM68-like

5.9e-74

75.81

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
        MKAL+CS+R ALHLS+PPPWK RSRI+DST TKNL   +R +RG +++NAKGFTG+PATAK+RE A +K SGQNNS     DDDEI EAV+ RIITRILA
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA

Query:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR
        FVGVPMAFGV L+KI E + EQK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMWKEEDEA+R
Subjt:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANR

A0A6J1FZC0 uncharacterized protein PAM68-like

7.9e-103

100

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
        MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA

Query:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
Subjt:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

A0A6J1HYL3 uncharacterized protein PAM68-like

1.6e-95

95.24

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA
        MKALVCSFRHAL LSKPPPWKQRSRID+STTTKNLR+FT TSRGQIQLNAKGFTGSPATAKDRETAVKK S QNNSRD GGDDDEIPEAVAKRIITRILA
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILA

Query:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN
        FVG+PMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGG+
Subjt:  FVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

3.7e-17

32.16

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Query:  KQRSRIDDSTTTKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDE-----------IPEAVAKRIITRILAFVGVPMAF
        K +S++  S T  N    +R +     +N+ KGF   P   K +++   KP  Q++  D   D+D+           IPE V  R+I+R+   VG+P+  
Subjt:  KQRSRIDDSTTTKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDE-----------IPEAVAKRIITRILAFVGVPMAF

Query:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK
        G+        +       VP W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW+EA+KNW   W+
Subjt:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

1.5e-26

37.3

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIIT
        M+AL+CS R         P    SR    T + N +     ++     ++    KGF  S  +        +KP   +   +   DD  IP+ V +R++ 
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIIT

Query:  RILAFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE
        RI+  VG P+  GV ++K+LE + ++ +W VP+W+P+LT  +TFG+S +GIAYG+LST+LDP K  +LFG  EA++NWVEMWKE+
Subjt:  RILAFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

2.7e-18

32.16

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Query:  KQRSRIDDSTTTKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDE-----------IPEAVAKRIITRILAFVGVPMAF
        K +S++  S T  N    +R +     +N+ KGF   P   K +++   KP  Q++  D   D+D+           IPE V  R+I+R+   VG+P+  
Subjt:  KQRSRIDDSTTTKNLRIFTRTSRGQIQLNA-KGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDE-----------IPEAVAKRIITRILAFVGVPMAF

Query:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK
        G+        +       VP W+PF+  F+ FG +  G++YG +S+S DP +EG+L GW+EA+KNW   W+
Subjt:  GVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

1.1e-27

37.3

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Query:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIIT
        M+AL+CS R         P    SR    T + N +     ++     ++    KGF  S  +        +KP   +   +   DD  IP+ V +R++ 
Subjt:  MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSR----GQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIIT

Query:  RILAFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE
        RI+  VG P+  GV ++K+LE + ++ +W VP+W+P+LT  +TFG+S +GIAYG+LST+LDP K  +LFG  EA++NWVEMWKE+
Subjt:  RILAFVGVPMAFGVTLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAAGCTCTGGTGTGTTCCTTCCGGCACGCTCTACACCTCTCGAAGCCTCCGCCATGGAAACAGAGAAGCCGAATCGATGACTCAACGACCACGAAGAATCTCAGAAT
TTTCACAAGAACATCCCGAGGCCAGATCCAACTAAACGCCAAGGGTTTCACAGGTTCTCCGGCAACAGCGAAAGACAGAGAAACCGCCGTGAAAAAACCTTCCGGCCAAA
ACAATAGCAGAGACGGCGGCGGCGACGACGATGAAATTCCAGAGGCCGTAGCCAAGAGGATCATAACGAGAATCTTGGCTTTCGTTGGAGTTCCGATGGCGTTCGGCGTG
ACATTGGTGAAGATCTTAGAGGCGGTCCATGAGCAGAAACTTTGGCATGTGCCAATTTGGCTGCCGTTCTTGACGATTTTCTTGACATTTGGAGCTTCGACGATGGGAAT
CGCTTACGGGACGCTGTCGACGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGATGGGATGAGGCGCAGAAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAG
CCAATCGTGGAGGAAACTAA

mRNA sequence

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Protein sequence

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MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATAKDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGV
TLVKILEAVHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEEDEANRGGN

CmoCh18G013030 (gene) of Cucurbita moschata (Rifu) v1 genome