; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G013480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G013480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthylakoid lumenal 17.4 kDa protein, chloroplastic
Genome locationCmo_Chr18:12748581..12750924
RNA-Seq ExpressionCmoCh18G013480
SyntenyCmoCh18G013480
Gene Ontology termsNA
InterPro domainsIPR001646 - Pentapeptide repeat
IPR044195 - Pentapeptide repeat containing protein TL17-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574243.1 Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.7e-12899.58Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_008455988.1 PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]2.1e-11589.45Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MA LSIP SQNGFSRSF+S KRPQ++ P   SL  ITC A  DGA+P+E+LSPCKHI TVACGLLAVW LTNT+PVIAA QRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+K+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_022945269.1 thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata]5.7e-129100Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_022968163.1 thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]4.0e-12294.94Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTVACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTV+SGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

XP_023541447.1 thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]2.5e-12497.05Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLA ITC A VDGAEPKESLSPCKHIGT ACGLLAVW LTNTTPVIAATQRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA FKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

TrEMBL top hitse value%identityAlignment
A0A1S3C2V7 thylakoid lumenal 17.4 kDa protein, chloroplastic1.0e-11589.45Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MA LSIP SQNGFSRSF+S KRPQ++ P   SL  ITC A  DGA+P+E+LSPCKHI TVACGLLAVW LTNT+PVIAA QRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+K+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1E548 thylakoid lumenal 17.4 kDa protein, chloroplastic-like1.1e-11488.61Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MA LSIP SQNGFSR F+SAK P + +P + SLAPI+C A  DGA P+ESLSPC HIG+VACGLLAVW LTNT+P  AA QRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        +LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1G0I9 thylakoid lumenal 17.4 kDa protein, chloroplastic2.8e-129100Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1HX78 thylakoid lumenal 17.4 kDa protein, chloroplastic-like1.9e-12294.94Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTVACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTV+SGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

A0A6J1JAQ7 thylakoid lumenal 17.4 kDa protein, chloroplastic-like1.7e-11589.45Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN
        MA LSIP SQNGFSR F+SAK P +I+P + SLA I+C A  DGAEP+ESLSPC HIG+VACGLLAVW LTNT+P  AA QRLPPLSTEPNRCERAFVGN
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGN

Query:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
        TIGQANGVYDKPIDLRFCDYTN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA
Subjt:  TIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDA

Query:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Subjt:  QLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

SwissProt top hitse value%identityAlignment
B1WVN5 Pentapeptide repeat protein Rfr325.7e-0729.41Show/hide
Query:  GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC--
        GKSL  A      ++++ F  ADL   V + +  +GA   G D +N +    +F  A+L  A+    ++  + FDDA++  A F   ++   ++ KLC  
Subjt:  GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC--

Query:  ---VNPTISPEGRAELGCR
           VNP      R  LGC+
Subjt:  ---VNPTISPEGRAELGCR

P74221 Uncharacterized protein slr11527.0e-0531.63Show/hide
Query:  QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN
        Q+    L  A +++A    ADL++  +  A+AV  +FKG   S A L       ANL+GA  + T L+G+    A L++A F+     + +LQ+ C++
Subjt:  QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN

P81760 Thylakoid lumenal 17.4 kDa protein, chloroplastic3.9e-8063.75Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAA---VDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAF
        MA+L +  ++N  S  F+S      +     SL  + C A     +G   K+SL P K +G++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AF
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAA---VDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAF

Query:  VGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTF
        VGNTIGQANGVYDKP+DLRFCDYTND++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF
Subjt:  VGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTF

Query:  DDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        ++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  DDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Q8H1Q1 Thylakoid lumenal protein TL20.3, chloroplastic1.5e-1029.52Show/hide
Query:  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV
        VIA++  +P ++ E NR E A      G  +       DL    ++N+    +  +  +A M E+ F G+  +   + KA A  A+F G D S+ ++DR+
Subjt:  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV

Query:  NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC
           +ANL  A+   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Subjt:  NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC

Q8Z4G9 Secreted effector protein PipB27.8e-0434.52Show/hide
Query:  LKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDT
        L G +L A  + +A   GADL   ++  A   GA+FKG + S A L     G +NL  A  +++++ G+T D A L  A  + T
Subjt:  LKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDT

Arabidopsis top hitse value%identityAlignment
AT1G12250.1 Pentapeptide repeat-containing protein1.0e-1129.52Show/hide
Query:  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV
        VIA++  +P ++ E NR E A      G  +       DL    ++N+    +  +  +A M E+ F G+  +   + KA A  A+F G D S+ ++DR+
Subjt:  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV

Query:  NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC
           +ANL  A+   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Subjt:  NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC

AT1G12250.2 Pentapeptide repeat-containing protein1.0e-1129.52Show/hide
Query:  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV
        VIA++  +P ++ E NR E A      G  +       DL    ++N+    +  +  +A M E+ F G+  +   + KA A  A+F G D S+ ++DR+
Subjt:  VIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV

Query:  NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC
           +ANL  A+   +VL+ S    A+++ A F D +I  +  Q LC      NP    + R  LGC
Subjt:  NFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC

AT5G53490.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-8163.75Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAA---VDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAF
        MA+L +  ++N  S  F+S      +     SL  + C A     +G   K+SL P K +G++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AF
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAA---VDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAF

Query:  VGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTF
        VGNTIGQANGVYDKP+DLRFCDYTND++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF
Subjt:  VGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTF

Query:  DDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        ++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  DDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

AT5G53490.2 Tetratricopeptide repeat (TPR)-like superfamily protein8.0e-8163.6Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRA--AVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFV
        MA+L +  ++N  S  F+S      +     SL  + C      +G   K+SL P K +G++AC  L   TLT  +PVIAA QRLPPLSTEP+RCE+AFV
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRA--AVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFV

Query:  GNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFD
        GNTIGQANGVYDKP+DLRFCDYTND++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF+
Subjt:  GNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFD

Query:  DAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        +A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  DAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

AT5G53490.3 Tetratricopeptide repeat (TPR)-like superfamily protein3.1e-8060.63Show/hide
Query:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAV-----------------DGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRL
        MA+L +  ++N  S  F+S      +     SL  + C A V                 +G   K+SL P K +G++AC  L   TLT  +PVIAA QRL
Subjt:  MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAV-----------------DGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRL

Query:  PPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ
        PPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFCDYTND++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFGK+NL+
Subjt:  PPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ

Query:  GALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
        GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Subjt:  GALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTTTATCAATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCCTATCAC
TTGCCGTGCCGCTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGTAGCTTGTGGTCTTCTTGCTGTTTGGACTTTGACAAATACCA
CTCCTGTGATTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGAT
AAGCCAATTGATCTTCGTTTCTGCGACTACACAAATGATAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCCTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCT
CTCTGAAGTGGTGATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAG
GAGCTTTGTTCAAGAACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTG
TGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA
mRNA sequenceShow/hide mRNA sequence
ACGTGTACTGCCACGCCATCAATATCAGATCCCCAACATCTCAGAACGGGTAAGTGAAGCACAGGGAACCAAGGATAGGGAATTCATTTTTCCAAATGGCCGCTTTATCA
ATTCCACTCTCTCAGAATGGTTTCTCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTATATCCCCACTTGCCCCTTCCCTCGCCCCTATCACTTGCCGTGCCGCTGT
GGATGGGGCTGAACCAAAAGAGAGCTTGTCACCTTGCAAGCACATTGGTACCGTAGCTTGTGGTCTTCTTGCTGTTTGGACTTTGACAAATACCACTCCTGTGATTGCAG
CTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTT
CGTTTCTGCGACTACACAAATGATAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCCTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTGAT
GTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAACGCAGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGA
ACACTGTACTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACT
ATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCAATATAGTCTGTGTATGTATTGTATTGTATTGTCTAGACAACTTAATGATTTTGGTAAGTAATACAT
ATTCAAAGAGACAACTCCCTCTAACTTCTGTTGAAGAACAATGTGGTGTCACTGTCAAGTTCATGTTTTCCGTAATCTTCTTTCGTTGTTTCCTTAGGAACAAAATCTGA
TGTTTTTTCTTTTGAGTATACTCTTAACTGCCTATTTAAGTGCATCTAGTGTAGTGTAGTGGTATCATAGTACCCTCCTACGGTACTGTCTGGGGTTCAGTTCCCCGGAT
GCG
Protein sequenceShow/hide protein sequence
MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTVACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYD
KPIDLRFCDYTNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKL
CVNPTISPEGRAELGCR