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CmoCh18G013790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G013790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHeavy metal-associated domain containing protein
Genome locationCmo_Chr18:12854805..12855318
RNA-Seq ExpressionCmoCh18G013790
SyntenyCmoCh18G013790
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574268.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]3.9e-6884.94Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAH PFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDD--NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFWNN+DDD  NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFWNNDDDD--NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

KAG7013336.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-6986.67Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFW-NNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFW NNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFW-NNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

XP_022945716.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata]8.4e-7187.2Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

XP_022968373.1 heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]5.1e-6883.93Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDY+EQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDD----NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFWN DDDD    NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFWNNDDDD----NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

XP_023542922.1 heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo]9.2e-7085.98Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDY+EQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFWN DDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

TrEMBL top hitse value%identityAlignment
A0A3Q7FME6 HMA domain-containing protein2.0e-3051.88Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+K                     GIYSVNVD+E+QKVT+WGICNK  VL+ VRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDD------DNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS
        RFWN +D+      D++++ P A    +  R     + + RSLS KLA KK F  TRSYS
Subjt:  RFWNNDDD------DNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS

A0A6J1CHX5 uncharacterized protein LOC1110116616.7e-3459.88Show/hide
Query:  MANLQIVPAHT--PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRK
        MA L IVPA T   ++VEPQLVEMMVPLYSHGCANK+HKALSHLK                     GIYSVNVD  +QKVTVWGICNK QVLSTVRSKRK
Subjt:  MANLQIVPAHT--PFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRK

Query:  AARFWNND-DDDNNNNDPQAEEEGLN-SRRPSFGVNKLRSLSFKLACKKV--FTTTRSYSLR
        AARFWN++ + + +N+ P         S RP F V   RSLS KLACKKV   TT RSYS R
Subjt:  AARFWNND-DDDNNNNDPQAEEEGLN-SRRPSFGVNKLRSLSFKLACKKV--FTTTRSYSLR

A0A6J1G1N8 protein SODIUM POTASSIUM ROOT DEFECTIVE 24.0e-7187.2Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

A0A6J1HXU2 heavy metal-associated isoprenylated plant protein 282.5e-6883.93Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLK                     GIYSVNVDY+EQKVTVWGICNKNQVLSTVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDD----NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
        RFWN DDDD    NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS
Subjt:  RFWNNDDDD----NNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS

M0ZIL1 HMA domain-containing protein1.2e-3053.9Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        MAN+QIVPA    +VEPQ VEMMVPLYS+GC  KI+ ALSH+K                     GIYSVNVD+E+QKVTVWGICNK  VL+TVRSKRKAA
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS
        RFWN +D+    ++  +        RP   + + RSLS+KLA KK F  TRSYS
Subjt:  RFWNNDDDDNNNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56891.1 Heavy metal transport/detoxification superfamily protein2.5e-0427.06Show/hide
Query:  LVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW
        +VE++V +   GC  K+ +A+S L                      G+ +V +D + QKVTV G  ++ +VL  V+   + A +W
Subjt:  LVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFW

AT4G27590.1 Heavy metal transport/detoxification superfamily protein2.8e-2453.57Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLK                     GIYSV VDY  QKVTVWGICNK  VL+ V+ KRK A
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDDNNN
        RFWN ++++NNN
Subjt:  RFWNNDDDDNNN

AT4G27590.2 Heavy metal transport/detoxification superfamily protein2.8e-2453.57Show/hide
Query:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA
        M +LQIVP +    VE Q VEMMVPLYS+GC  K+ +ALSHLK                     GIYSV VDY  QKVTVWGICNK  VL+ V+ KRK A
Subjt:  MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAA

Query:  RFWNNDDDDNNN
        RFWN ++++NNN
Subjt:  RFWNNDDDDNNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAA
GGCTCTCTCCCATCTCAAAGTACAACACCCATCTATATATTCTCCAAAACCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTACG
AGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAATGATGATGATGATAAC
AATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTT
CACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATTTGCAAATAGTTCCGGCTCACACCCCATTTCATGTGGAGCCTCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAA
GGCTCTCTCCCATCTCAAAGTACAACACCCATCTATATATTCTCCAAAACCTCACACTAACAACATGCATGGTATGATTGCAGGGATATATTCAGTTAACGTAGATTACG
AGGAGCAGAAAGTGACGGTGTGGGGAATATGCAACAAAAACCAAGTGTTGAGCACTGTGAGAAGCAAGAGAAAAGCAGCTCGTTTTTGGAACAATGATGATGATGATAAC
AATAATAATGATCCACAAGCAGAAGAAGAAGGTCTAAACTCAAGAAGGCCTTCTTTTGGTGTTAACAAGCTTCGTTCCCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTT
CACCACTACAAGATCATATTCCTTGCGTATCTTTGGGGCTCCTACTGTTTCCTAA
Protein sequenceShow/hide protein sequence
MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKVQHPSIYSPKPHTNNMHGMIAGIYSVNVDYEEQKVTVWGICNKNQVLSTVRSKRKAARFWNNDDDDN
NNNDPQAEEEGLNSRRPSFGVNKLRSLSFKLACKKVFTTTRSYSLRIFGAPTVS