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CmoCh18G013850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G013850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:12878436..12880331
RNA-Seq ExpressionCmoCh18G013850
SyntenyCmoCh18G013850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574273.1 hypothetical protein SDJN03_28160, partial [Cucurbita argyrosperma subsp. sororia]3.2e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

XP_022945025.1 uncharacterized protein LOC111449390 isoform X1 [Cucurbita moschata]3.2e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

XP_022945026.1 uncharacterized protein LOC111449390 isoform X2 [Cucurbita moschata]3.2e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

XP_022967983.1 uncharacterized protein LOC111467357 isoform X1 [Cucurbita maxima]3.2e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

XP_023542354.1 uncharacterized protein LOC111802281 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-7397.83Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        +SSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

TrEMBL top hitse value%identityAlignment
A0A6J1CI74 uncharacterized protein LOC1110117293.1e-7092.86Show/hide
Query:  MELNGKSMVS--ANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD
        MELNGKSMVS  ANVIYLSTILGRD QV+AHKCDWKCENEHVCGNMYRCKLTG+THICDKNCDQRI+YDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD
Subjt:  MELNGKSMVS--ANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLD

Query:  ADNSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        ADNSS+DDF FKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  ADNSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

A0A6J1FZP7 uncharacterized protein LOC111449390 isoform X21.6e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

A0A6J1FZQ8 uncharacterized protein LOC111449390 isoform X11.6e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

A0A6J1HTL7 uncharacterized protein LOC111467357 isoform X21.6e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

A0A6J1HWR1 uncharacterized protein LOC111467357 isoform X11.6e-7498.55Show/hide
Query:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
        MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD
Subjt:  MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDAD

Query:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN
        NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQ G+
Subjt:  NSSVDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49550.1 unknown protein1.4e-5166.9Show/hide
Query:  MELNGKSMV---SANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL
        ME+ GKS V   SANVIYLS ILG +     HKCDWKCENE+VCGNMYRCKLTG+TH+CDKNC+QRI+YDNH+SLCRASG+IFPL+L EEQA++G+RRKL
Subjt:  MELNGKSMV---SANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL

Query:  DADNSS--VDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGNAG
        D ++     +    +RRRDAQFH SPFERSF+A  P CSQ G  G
Subjt:  DADNSS--VDDFGFKRRRDAQFHPSPFERSFSAAVPICSQKGNAG

AT5G24610.1 unknown protein5.7e-5368.71Show/hide
Query:  MELNGKS---MVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL
        ME+ GKS   + SANVIYLS ILGRD     HKCDWKCENE+VCGNMYRCKLTG+TH+CDKNC+QRI+YDNHSSLCRASG+IFPL+  EEQA++G+RRKL
Subjt:  MELNGKS---MVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKL

Query:  D-ADNSSVDDFGFK-RRRDAQFHPSPFERSFSAAVPICSQKGNAGQL
        D A++   +   FK RRRDAQFH SPFERSF+A  PICS  G+  +L
Subjt:  D-ADNSSVDDFGFK-RRRDAQFHPSPFERSFSAAVPICSQKGNAGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAA
TGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTC
GTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAATTCCTCCGTTGATGATTTTGGTTTTAAG
CGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAAAGGGCAACGCCGGCCAGCTCACCGACGCCGAGGG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGAACGGCAAATCCATGGTCTCTGCAAACGTTATTTATCTTTCAACTATTCTGGGTAGAGATGAGCAAGTTGTTGCCCACAAATGTGATTGGAAATGTGAGAA
TGAACATGTGTGTGGTAATATGTACCGCTGCAAACTTACAGGAATGACTCACATTTGTGACAAAAACTGTGACCAAAGAATTGTGTATGATAACCATAGCTCACTTTGTC
GTGCAAGTGGGCAAATTTTCCCGCTTACACTGACAGAGGAACAAGCAATCAGAGGCATTCGCAGGAAACTTGATGCTGACAATTCCTCCGTTGATGATTTTGGTTTTAAG
CGTAGGCGGGATGCCCAGTTTCATCCTTCACCTTTTGAGAGATCTTTCTCTGCTGCCGTCCCAATTTGTAGTCAAAAGGGCAACGCCGGCCAGCTCACCGACGCCGAGGG
TTGA
Protein sequenceShow/hide protein sequence
MELNGKSMVSANVIYLSTILGRDEQVVAHKCDWKCENEHVCGNMYRCKLTGMTHICDKNCDQRIVYDNHSSLCRASGQIFPLTLTEEQAIRGIRRKLDADNSSVDDFGFK
RRRDAQFHPSPFERSFSAAVPICSQKGNAGQLTDAEG