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CmoCh19G000010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G000010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmitochondrial import inner membrane translocase subunit PAM16 like 2-like
Genome locationCmo_Chr19:15603..18250
RNA-Seq ExpressionCmoCh19G000010
SyntenyCmoCh19G000010
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005341 - Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011201.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022925423.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]3.0e-5196.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+T ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022963881.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]1.2e-52100Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022967548.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 [Cucurbita maxima]1.8e-5198.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDA S
Subjt:  ERLETLYQSKGQDAPS

XP_023554055.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita pepo subsp. pepo]5.2e-5197.41Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILG+TA TPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLE LYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

TrEMBL top hitse value%identityAlignment
A0A5D3E4Y7 Mitochondrial import inner membrane translocase subunit tim161.6e-5093.97Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QN+VRRASKVMTEQEARQILG+T ETPWEE+VKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQ+KGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1EF52 mitochondrial import inner membrane translocase subunit PAM16 like 2-like1.5e-5196.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+T ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1HHA5 mitochondrial import inner membrane translocase subunit PAM16 like 2-like6.0e-53100Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1HVD2 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X38.7e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDA S
Subjt:  ERLETLYQSKGQDAPS

A0A6J1IG86 mitochondrial import inner membrane translocase subunit PAM16 like 2-like1.2e-5094.83Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG++ ETPWEEIVKKYDALFE+N QTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

SwissProt top hitse value%identityAlignment
Q6NTU3 Mitochondrial import inner membrane translocase subunit tim16-A1.8e-0943.4Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKV--MTEQEARQILGITAETPWEEIVKKYDALFERNAQ--TGSFYLQSKVHR
        AK LA ++VMG  ++ RAF +A RQ    +  +  A+          S +  ++ QEA+QIL ++  TP EEI K Y+ LF+ N +   GSFYLQSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKV--MTEQEARQILGITAETPWEEIVKKYDALFERNAQ--TGSFYLQSKVHR

Query:  AKERLE
        AKERL+
Subjt:  AKERLE

Q6PBL0 Mitochondrial import inner membrane translocase subunit tim163.8e-1249.06Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERN--AQTGSFYLQSKVHR
        AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q++   +   MT QEA+QIL I+  TP EEI K Y+ LF+ N  A  GSFY+QSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERN--AQTGSFYLQSKVHR

Query:  AKERLE
        AKERL+
Subjt:  AKERLE

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 28.1e-3971.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILG+T +T WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        E LE +Y+S+G   PS
Subjt:  ERLETLYQSKGQDAPS

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 14.8e-3168.52Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q   R     + E EARQILG+T ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

Q9C1W5 Mitochondrial import inner membrane translocase subunit tim162.7e-1040.52Show/hide
Query:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNS---VRRASKVMTEQEARQILGITAETPWE-EIVKKYDALFERN--AQTGSFYLQSKVH
        + +   I++GS ++++AFVQAY+Q + NA++    Q     S   VRR    MT QEA  IL I  E+  E E+ K++  +FE N   + GSFYLQSKV 
Subjt:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNS---VRRASKVMTEQEARQILGITAETPWE-EIVKKYDALFERN--AQTGSFYLQSKVH

Query:  RAKERLETLYQSKGQD
        RA E+L++    K Q+
Subjt:  RAKERLETLYQSKGQD

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam165.8e-4071.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILG+T +T WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        E LE +Y+S+G   PS
Subjt:  ERLETLYQSKGQDAPS

AT5G61880.1 Protein Transporter, Pam163.4e-3268.52Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q   R     + E EARQILG+T ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

AT5G61880.2 Protein Transporter, Pam163.4e-3268.52Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q   R     + E EARQILG+T ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGT
TGCTCAAGAAACAATTCAAAACAGTGTTCGCAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCCAGGCAGATTCTTGGCATCACCGCGGAAACGCCTTGGGAGGAAATTG
TGAAGAAATATGACGCATTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAA
GGTCAGGATGCCCCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
CCCCCCCCTCCGTATCAACGATTCGCCCCTACGATTTCCTGCGTGGTTCGCCAAATAACCTTTCTGATTGATTTCGTAGCTCTAGCGGCTTTAACAAATCCGGACCTGTT
ATCAAGGCCAGCCAATTAATCATGGCTGCGAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTAC
GAATGCTTCGAAGTCCGGTGTTGCTCAAGAAACAATTCAAAACAGTGTTCGCAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCCAGGCAGATTCTTGGCATCACCGCGG
AAACGCCTTGGGAGGAAATTGTGAAGAAATATGACGCATTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTA
GAAACTCTCTATCAGAGCAAAGGTCAGGATGCCCCTAGCTGAGGAATGTGTTGTGTTGTGTTTTGCACATTCACCGTTGTATAATTCTTAATTGGTCATGGCCGCCATGA
ATGATGAAATTGATGTAAAATCTTTTTTTCCATTTGTGGGAAAAAAATCGTGCTTTGAAATTAGTATTTTGGATCTCGATGCCTTGAGAGCACCTAACTTTCGTTTCATA
CTTTTAGTAAATCTCAAAAACAGTCTACAATTAACTTAGGTTCAG
Protein sequenceShow/hide protein sequence
MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSK
GQDAPS