; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G000060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G000060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationCmo_Chr19:45313..50211
RNA-Seq ExpressionCmoCh19G000060
SyntenyCmoCh19G000060
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-17294.8Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLI GCNGFIWIGEHVDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS SLNI+V
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

XP_022963877.1 exosome complex component RRP4 homolog isoform X1 [Cucurbita moschata]2.9e-180100Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

XP_022967543.1 exosome complex component RRP4 homolog isoform X1 [Cucurbita maxima]6.2e-17597.55Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRELQISLNQTQ+IRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVER+NKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRR+TA DELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGK+ERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLIFGCNGFI IGE VDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLS SLNINV
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]1.1e-17194.5Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLI GCNGFIWIGEHVDPTEDMM+ED +NKSEQKGSKFEG FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSL  SLNI+V
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

XP_023554062.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]1.4e-17999.69Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLS SLNINV
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

TrEMBL top hitse value%identityAlignment
A0A6J1DQ00 exosome complex component RRP4 homolog isoform X15.0e-16288.1Show/hide
Query:  VPTAVAPDMRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVG
        + T +  DMR LQISLNQTQKIRLQ ALE LESIS KANSDASVIVADTIP+NY+DG+LKGHGT DL+GEVVAT+CGVVERVNKLIYVRALRARYKPEVG
Subjt:  VPTAVAPDMRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVG

Query:  DIIVGRVTEVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRR
        DI+VGRV EVAPKRWRL+INYSQ AVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRR
Subjt:  DIIVGRVTEVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRR

Query:  KQHFHHLEQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGN-QVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVS
        KQHFHHLEQYGIDLI GCNGFIWIGEHVDP EDMMIEDQVNK EQKG K EG FGN + QERVYTPLETR+NICR ANA+RVLS LGFI+TVEVIMETV+
Subjt:  KQHFHHLEQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGN-QVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVS

Query:  LSFSLNINVHEMLGSEFCVLTAEKEAERRTSSKKRG
        LS SLNI+VHEMLGSEFCVL AE E ERRTSSKKRG
Subjt:  LSFSLNINVHEMLGSEFCVLTAEKEAERRTSSKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog2.6e-17194.77Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLI GCNGFIWIGEHVDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS SLNI+V
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKK
        HEMLGSEFCVLTAEKEAERRTSSKK
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X11.4e-180100Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

A0A6J1HVC7 exosome complex component RRP4 homolog isoform X13.0e-17597.55Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MRELQISLNQTQ+IRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVER+NKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRR+TA DELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGK+ERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLIFGCNGFI IGE VDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLS SLNINV
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog1.2e-17194.5Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR LQ+SLNQTQKIRLQRALE LESISSKANSDASV+VADTIPLNY+DGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV
        QYGIDLI GCNGFIWIGEHVDPTEDMM+ED +NKSEQKGSKFEG+FGNQVQER+YTPLETRQNICRTANAIRVLS LGFIM+VEVIMETVSLS SLNI+V
Subjt:  QYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNINV

Query:  HEMLGSEFCVLTAEKEAERRTSSKKRG
        HEMLGSEFCVLTAEKEAERRTSSKKRG
Subjt:  HEMLGSEFCVLTAEKEAERRTSSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp41.1e-4437.46Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        M E++  + + +++ L    ++LE      + +   +V     +  D   ++GHGT   +G + A++ G V+RVNKLI V+ LR++Y PE+GD+I+G++ 
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EV PKRW+++I   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D++ AEV+ +  DG + +  RS KYGKL  G  L V P LV R K H + L
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMT
           G+D+I   NG++W+ +H    E+      + + E++ S  E  + N+  E       TR NI R +  I+ L++    +T
Subjt:  EQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMT

Q13868 Exosome complex component RRP41.2e-4350.24Show/hide
Query:  KIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNIN
        ++RL  A + L     +      V+  DTI    D G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW++  N
Subjt:  KIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +I G N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCN

Query:  GFIWI
        GFIWI
Subjt:  GFIWI

Q2KID0 Exosome complex component RRP41.4e-4448.6Show/hide
Query:  KIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNIN
        ++RL  A + L     + +    V+  DTI    D G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW++  N
Subjt:  KIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +I G N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCN

Query:  GFIWIGEHVDPTED
        GFIW+    +  ED
Subjt:  GFIWIGEHVDPTED

Q8VBV3 Exosome complex component RRP46.3e-4549.77Show/hide
Query:  KIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNIN
        ++RL +A + L     + +    V+  DTI    D G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDI+VGR+TEV  KRW++  N
Subjt:  KIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+    DG + L  RS KYGKL +G L+ VSP LVKR+K HFH L   G  +I G N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCN

Query:  GFIWI---GEHVD
        GFIWI    EH D
Subjt:  GFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog6.4e-12267.58Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR+LQ+ L+QTQK+R +RA+E L+S+SS ANSDASVIV D+IP+N+DD  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDI+VGRV 
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+ +N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNIN
        E  GIDLI GCNGFIW+GEHV+  + M I+DQ ++ E   S   G      +E+ + PLETRQ ICR  NAIRVLSNLGF +T+EVIMETV+LS S NI+
Subjt:  EQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNIN

Query:  VHEMLGSEFCVLTAEKEAERRTSSKKR
        +H+MLGSEF V+ AE EAERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEAERRTSSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 44.5e-12367.58Show/hide
Query:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT
        MR+LQ+ L+QTQK+R +RA+E L+S+SS ANSDASVIV D+IP+N+DD  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDI+VGRV 
Subjt:  MRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIIVGRVT

Query:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL
        EVA KRWR+ +N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR FQHDG L LQARSQKYGKLE+GQLL V PYLVKR K HFH++
Subjt:  EVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDG-LHLQARSQKYGKLERGQLLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNIN
        E  GIDLI GCNGFIW+GEHV+  + M I+DQ ++ E   S   G      +E+ + PLETRQ ICR  NAIRVLSNLGF +T+EVIMETV+LS S NI+
Subjt:  EQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIMETVSLSFSLNIN

Query:  VHEMLGSEFCVLTAEKEAERRTSSKKR
        +H+MLGSEF V+ AE EAERR + +K+
Subjt:  VHEMLGSEFCVLTAEKEAERRTSSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACACCAAATCCTCCAAGCGCAGTTCAGTGTGCGAGAGGTTTCTCAAGGCTCTCGGCATGTGTCCTTCCCCAACCCGCCATGAGGAACCCCTGGCTCCTGA
AATGGACAAAAAACAGAGGCTCAACATCAATGGGGCACCTGAAATGGAGAAAAAACAAAAACTTGAACCAAACGACGCGTTCAGCGACTACATCAATCGGGCTAAGCGAA
GGCTGGGAAGCATATCGAGCAAGCGACATGATCCGAGTAGCAAGGGAAAGGAGAATCTGAAGGAGGATCGGCGCTTTACAGATTATATCATCCGAGCTAGGAATAGGCTG
AGGGCTACCTCCTCGACCACTTCCGCTGCCGCTCTTGCTAAGAGGCCGCCGTCACGTCCGTCGTCGTCGTCGCTCCACCACGCGGCACCTGGTTCGCCCGTGGTTCCTAC
CGCCGTCGCACCTGATATGAGAGAATTACAAATTTCCTTGAATCAAACCCAGAAGATTCGGCTTCAAAGAGCCCTAGAATTGCTCGAGTCTATCTCTTCGAAGGCCAATT
CCGATGCTTCTGTTATAGTTGCTGATACCATTCCTTTGAATTACGACGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTAAATGGAGAAGTAGTTGCCACTATTTGT
GGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGCCTTACGTGCTAGATATAAACCGGAGGTTGGTGATATCATAGTGGGGCGTGTTACAGAGGTTGCCCCTAA
ACGTTGGAGATTGAACATAAATTATAGCCAAGATGCTGTCTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACA
TGCGGAGCATTTTCGAAGAAAATGATGTTATTTGTGCAGAAGTGCGTGGTTTTCAGCATGATGGCCTACACCTTCAAGCGAGAAGCCAGAAGTATGGGAAGCTTGAACGA
GGTCAGCTGCTCACAGTATCACCATATCTAGTCAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATATTCGGATGCAATGGATTTATCTG
GATTGGGGAGCATGTTGATCCCACAGAGGATATGATGATAGAAGATCAAGTTAATAAATCTGAACAAAAGGGTTCAAAATTTGAAGGAACTTTTGGTAACCAAGTGCAAG
AAAGAGTATATACTCCACTAGAGACACGTCAGAATATATGCAGAACTGCAAATGCTATTCGAGTATTGTCCAACTTAGGTTTCATAATGACAGTAGAAGTCATAATGGAG
ACAGTTAGTCTAAGTTTTTCTCTGAACATCAATGTGCATGAAATGCTTGGTTCGGAGTTCTGTGTCCTCACTGCAGAAAAAGAGGCTGAACGGCGGACTTCGAGTAAGAA
GAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAACACCAAATCCTCCAAGCGCAGTTCAGTGTGCGAGAGGTTTCTCAAGGCTCTCGGCATGTGTCCTTCCCCAACCCGCCATGAGGAACCCCTGGCTCCTGA
AATGGACAAAAAACAGAGGCTCAACATCAATGGGGCACCTGAAATGGAGAAAAAACAAAAACTTGAACCAAACGACGCGTTCAGCGACTACATCAATCGGGCTAAGCGAA
GGCTGGGAAGCATATCGAGCAAGCGACATGATCCGAGTAGCAAGGGAAAGGAGAATCTGAAGGAGGATCGGCGCTTTACAGATTATATCATCCGAGCTAGGAATAGGCTG
AGGGCTACCTCCTCGACCACTTCCGCTGCCGCTCTTGCTAAGAGGCCGCCGTCACGTCCGTCGTCGTCGTCGCTCCACCACGCGGCACCTGGTTCGCCCGTGGTTCCTAC
CGCCGTCGCACCTGATATGAGAGAATTACAAATTTCCTTGAATCAAACCCAGAAGATTCGGCTTCAAAGAGCCCTAGAATTGCTCGAGTCTATCTCTTCGAAGGCCAATT
CCGATGCTTCTGTTATAGTTGCTGATACCATTCCTTTGAATTACGACGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTAAATGGAGAAGTAGTTGCCACTATTTGT
GGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGTGCCTTACGTGCTAGATATAAACCGGAGGTTGGTGATATCATAGTGGGGCGTGTTACAGAGGTTGCCCCTAA
ACGTTGGAGATTGAACATAAATTATAGCCAAGATGCTGTCTTGATGCTTTCTTCAATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCAGTTGATGAACTCAACA
TGCGGAGCATTTTCGAAGAAAATGATGTTATTTGTGCAGAAGTGCGTGGTTTTCAGCATGATGGCCTACACCTTCAAGCGAGAAGCCAGAAGTATGGGAAGCTTGAACGA
GGTCAGCTGCTCACAGTATCACCATATCTAGTCAAGAGACGCAAACAACACTTCCATCATTTGGAGCAGTATGGTATTGACTTAATATTCGGATGCAATGGATTTATCTG
GATTGGGGAGCATGTTGATCCCACAGAGGATATGATGATAGAAGATCAAGTTAATAAATCTGAACAAAAGGGTTCAAAATTTGAAGGAACTTTTGGTAACCAAGTGCAAG
AAAGAGTATATACTCCACTAGAGACACGTCAGAATATATGCAGAACTGCAAATGCTATTCGAGTATTGTCCAACTTAGGTTTCATAATGACAGTAGAAGTCATAATGGAG
ACAGTTAGTCTAAGTTTTTCTCTGAACATCAATGTGCATGAAATGCTTGGTTCGGAGTTCTGTGTCCTCACTGCAGAAAAAGAGGCTGAACGGCGGACTTCGAGTAAGAA
GAGGGGATGAAACTGTGAGTAATTTAAATTACTGTTCATGATAACTTTTGCTCCAAAGAGTTTGATTTTCAGAGGAACTAACTGTTAGAATATTTTGTAGAATTTTGGAT
TACCACCACTTGGTCTGTTAGTGTTAACAGTATAGAATGCAATATTTGCTTAATTATCTGTATTATGCACTATCTATTAGTACATTATAGAGCCTTCCCTAAGGCCTATA
GAGTCCTTGAACAGCCTCCCCTTAATCGAGGCTCGACTACACTTCTCTAGAGCCCTCAAATAAAGTACACA
Protein sequenceShow/hide protein sequence
MGKNTKSSKRSSVCERFLKALGMCPSPTRHEEPLAPEMDKKQRLNINGAPEMEKKQKLEPNDAFSDYINRAKRRLGSISSKRHDPSSKGKENLKEDRRFTDYIIRARNRL
RATSSTTSAAALAKRPPSRPSSSSLHHAAPGSPVVPTAVAPDMRELQISLNQTQKIRLQRALELLESISSKANSDASVIVADTIPLNYDDGVLKGHGTLDLNGEVVATIC
GVVERVNKLIYVRALRARYKPEVGDIIVGRVTEVAPKRWRLNINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLER
GQLLTVSPYLVKRRKQHFHHLEQYGIDLIFGCNGFIWIGEHVDPTEDMMIEDQVNKSEQKGSKFEGTFGNQVQERVYTPLETRQNICRTANAIRVLSNLGFIMTVEVIME
TVSLSFSLNINVHEMLGSEFCVLTAEKEAERRTSSKKRG