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CmoCh19G000180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G000180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr19:118443..118889
RNA-Seq ExpressionCmoCh19G000180
SyntenyCmoCh19G000180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571451.1 hypothetical protein SDJN03_28179, partial [Cucurbita argyrosperma subsp. sororia]6.8e-6498.41Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGP MLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCV
        LDLKAREMCEEREMEACLAAAKEK V
Subjt:  LDLKAREMCEEREMEACLAAAKEKCV
KAG7011217.1 hypothetical protein SDJN02_26120, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-7696.62Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        MESSQPQNPDEYS SSTVITFGRPIPLLRGPIRAGQSENPSAGP ML FRDPQAWESAYKICEL IIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
        LDLKAREMCEEREMEACLAAAKEK VGFAKEKCSKPFMDARIGIFQKV
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
XP_022145972.1 uncharacterized protein LOC111015296 [Momordica charantia]9.5e-6687.32Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        ME SQPQNPD+YSASST+ITF RPIPL+RGPIRAG SENPSAGP +LAFRDPQAWESAYKICE KIIEQCEAGARIGCSI AS+KCKP WWGFL+ S KG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        LDLK RE CEEREMEACLAAAKEKCVGFAKEKCSKPFM+ARI
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
XP_022963883.1 uncharacterized protein LOC111464060 [Cucurbita moschata]2.0e-79100Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
        LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
XP_022995502.1 uncharacterized protein LOC111491021 [Cucurbita maxima]6.8e-6485.21Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        ME SQPQNPD+YSA++T+ITF RPIPLLRGPIRAG+SENPSAGP +LAFRDPQAWESAYKICE KIIEQCEAGARIGCSI A +KCK  WW FL+QSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        LDLK RE CEEREMEACLA AKEKCVGFAKEKCSKPFM+ARI
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
TrEMBL top hitse value%identityAlignment
A0A5A7UV37 Uncharacterized protein5.3e-6283.1Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        ME SQP NP EYSASST+ITF RPIPLLRGP+RA QSENPSAGP +LAF+D QAWESA+K CE KIIEQCEAGARIGCSI AS+KCKP WWGFL +SKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        LDLK RE CEE EMEACLAAAKEKCVGFAKEKC KPFM+ARI
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
A0A6J1CY74 uncharacterized protein LOC1110152964.6e-6687.32Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        ME SQPQNPD+YSASST+ITF RPIPL+RGPIRAG SENPSAGP +LAFRDPQAWESAYKICE KIIEQCEAGARIGCSI AS+KCKP WWGFL+ S KG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        LDLK RE CEEREMEACLAAAKEKCVGFAKEKCSKPFM+ARI
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
A0A6J1ES78 uncharacterized protein LOC1114372581.3e-6383.8Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        ME SQPQNPD+YSA++T+ITF RPIPLLRGPIR+G+SENPSAGP +LAFRDPQAW+SAYKICE KIIEQCEAGARIGCSI A +KCK  WW FL+QSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        LDLK RE+CEEREMEACLA AKEKCVGFAKEKCSKPFM+ARI
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
A0A6J1HJ78 uncharacterized protein LOC1114640609.6e-80100Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
        LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV
A0A6J1JZ34 uncharacterized protein LOC1114910213.3e-6485.21Show/hide
Query:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG
        ME SQPQNPD+YSA++T+ITF RPIPLLRGPIRAG+SENPSAGP +LAFRDPQAWESAYKICE KIIEQCEAGARIGCSI A +KCK  WW FL+QSKKG
Subjt:  MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKG

Query:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        LDLK RE CEEREMEACLA AKEKCVGFAKEKCSKPFM+ARI
Subjt:  LDLKAREMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63390.1 unknown protein2.4e-3551.47Show/hide
Query:  QNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKGLDLKAR
        ++ D++SA++T + F RPIPLLRGP+       PS G  +LAFR   +W +A+K CE  I +QCE GA+IGC++ AS+ CKP WW        G D++ R
Subjt:  QNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKGLDLKAR

Query:  EMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI
        E CEERE E C+AAAK KC  FAK+KCS  F+DARI
Subjt:  EMCEEREMEACLAAAKEKCVGFAKEKCSKPFMDARI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTCACAACCTCAGAATCCCGACGAGTACTCTGCCTCTTCGACAGTTATCACCTTCGGACGCCCAATTCCTCTTCTTCGTGGGCCAATTCGAGCCGGTCAATC
CGAAAATCCCTCGGCAGGTCCGTCCATGCTTGCATTTAGGGATCCCCAAGCGTGGGAATCTGCATACAAAATATGCGAGTTGAAGATTATTGAACAGTGCGAGGCCGGCG
CGAGGATTGGCTGTTCAATAATTGCTTCCGACAAATGCAAGCCGCGGTGGTGGGGATTTTTGATGCAATCGAAGAAGGGGTTGGATTTGAAGGCGAGGGAGATGTGCGAA
GAGCGAGAAATGGAGGCTTGCTTGGCTGCTGCAAAGGAGAAGTGTGTTGGTTTCGCGAAGGAGAAGTGTTCTAAGCCGTTCATGGATGCTAGAATTGGAATTTTTCAAAA
GGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTCACAACCTCAGAATCCCGACGAGTACTCTGCCTCTTCGACAGTTATCACCTTCGGACGCCCAATTCCTCTTCTTCGTGGGCCAATTCGAGCCGGTCAATC
CGAAAATCCCTCGGCAGGTCCGTCCATGCTTGCATTTAGGGATCCCCAAGCGTGGGAATCTGCATACAAAATATGCGAGTTGAAGATTATTGAACAGTGCGAGGCCGGCG
CGAGGATTGGCTGTTCAATAATTGCTTCCGACAAATGCAAGCCGCGGTGGTGGGGATTTTTGATGCAATCGAAGAAGGGGTTGGATTTGAAGGCGAGGGAGATGTGCGAA
GAGCGAGAAATGGAGGCTTGCTTGGCTGCTGCAAAGGAGAAGTGTGTTGGTTTCGCGAAGGAGAAGTGTTCTAAGCCGTTCATGGATGCTAGAATTGGAATTTTTCAAAA
GGTCTGA
Protein sequenceShow/hide protein sequence
MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYKICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKGLDLKAREMCE
EREMEACLAAAKEKCVGFAKEKCSKPFMDARIGIFQKV