; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G000310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G000310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNascent polypeptide-associated complex subunit alpha, muscle-specific form
Genome locationCmo_Chr19:183182..184491
RNA-Seq ExpressionCmoCh19G000310
SyntenyCmoCh19G000310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571464.1 hypothetical protein SDJN03_28192, partial [Cucurbita argyrosperma subsp. sororia]4.8e-111100Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL
        NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

KAG6606421.1 hypothetical protein SDJN03_03738, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7776.21Show/hide
Query:  MEAVIVVE-QHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKF
        MEAV+VVE QHRNQYYG       A F S PSRDFRG+NCRSFQSGAGILPTP KA  S T+H YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF
Subjt:  MEAVIVVE-QHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKF

Query:  SNKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILN
         N NS LHEEFYD +FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT S E+PRSAPEF++H PSAKSAPPSPTR+   S RF FH+ DSATKTLRRIL+
Subjt:  SNKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILN

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

KAG7011227.1 hypothetical protein SDJN02_26130, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-97100Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSR
        NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSR
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSR

KGN47907.1 hypothetical protein Csa_004001 [Cucumis sativus]1.4e-8680.98Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDFRGMNCRSFQSGAGILPTPLKAC S T+H YP SPKTPP CL+SN+ N KQLA+++SAPIPI  K S
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL
        N+++A HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAKSAPPSPTR+   S+RF FHSADSATKTLRRILNL
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL

Query:  DVDNE
        DV NE
Subjt:  DVDNE

XP_016900729.1 PREDICTED: uncharacterized protein LOC107990294 [Cucumis melo]3.0e-8479.02Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDF GMNCRSFQSGAGILPTPLKAC S T+H YP SPKTPP  L+SN+ N KQLA+ +SAPI I  K S
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL
        N+++  HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAKSAPPSPTR+ + S+R+ FHSADSATKTLRRILNL
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP6 Uncharacterized protein6.9e-8780.98Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDFRGMNCRSFQSGAGILPTPLKAC S T+H YP SPKTPP CL+SN+ N KQLA+++SAPIPI  K S
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL
        N+++A HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAKSAPPSPTR+   S+RF FHSADSATKTLRRILNL
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL

Query:  DVDNE
        DV NE
Subjt:  DVDNE

A0A1S4DXL6 uncharacterized protein LOC1079902941.4e-8479.02Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDF GMNCRSFQSGAGILPTPLKAC S T+H YP SPKTPP  L+SN+ N KQLA+ +SAPI I  K S
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL
        N+++  HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAKSAPPSPTR+ + S+R+ FHSADSATKTLRRILNL
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

A0A5A7UUU2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form5.1e-6672.28Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDF GMNCRSFQSGAGILPTPLKAC S T+H YP SPKTPP  L+SN+ N KQLA+ +SAPI I  K S
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIF
        N+++  HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAK    +P   L  S+  ++
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIF

A0A5D3CPQ8 Nascent polypeptide-associated complex subunit alpha, muscle-specific form5.1e-6672.28Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS
        MEAV+V+EQHRNQYY R++PHGPARF S  SRDF GMNCRSFQSGAGILPTPLKAC S T+H YP SPKTPP  L+SN+ N KQLA+ +SAPI I  K S
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFS

Query:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIF
        N+++  HEEFYDR+FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLEL RSAPEFEMH PSAK    +P   L  S+  ++
Subjt:  NKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIF

A0A6P4A757 uncharacterized protein LOC1074259503.4e-5462.44Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTP-PTCLSSNAGNGKQLASVKSAPIPITAKF
        ME ++VV QHRNQYY R +P GPAR+ S PSRDFRG+NCRSFQS AG+LPTP KAC S       SSPKTP P+  S      + L   KS PI I    
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTP-PTCLSSNAGNGKQLASVKSAPIPITAKF

Query:  SNKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLR
        S+K     EE  +   SFSELWAGP YSNSPPPSSLPIPKFSV  KRT SLELP SAPE EMH P AKSAPPSPTRE   S R +F SA+ ATKTL+
Subjt:  SNKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein4.3e-3346.67Show/hide
Query:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISG-TKHVYP--SSPKTPPTCLSSNAGNGKQLASVKSAPIPITA
        ME +IV  +HR+QYYG+ +  G  RF S PS+ FR +NCR+FQSG G+LP P +   +  TK       SP++P + L     +   + S +++PIPI  
Subjt:  MEAVIVVEQHRNQYYGRIEPHGPARFESPPSRDFRGMNCRSFQSGAGILPTPLKACISG-TKHVYP--SSPKTPPTCLSSNAGNGKQLASVKSAPIPITA

Query:  KFSNKNSALHEEFYD--RNFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTKSLELPRSAPEFEMH-RPSAKSAPPSPTRELESSSRFIFHSADSATKT
           ++      EF D  R+ S+SELWAGPTYSNSPPP+S+PIPKFS+  KRT SL  P  AP+  +  R  AKSAP SPT    SS    F S  SAT T
Subjt:  KFSNKNSALHEEFYD--RNFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTKSLELPRSAPEFEMH-RPSAKSAPPSPTRELESSSRFIFHSADSATKT

Query:  LRRILNLDVD
        LRR+LNL+++
Subjt:  LRRILNLDVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTGGAACCATTTCAGATCCGTCGATTCTGGTTCAAACCCTCGCTCGGGGCTCAATCTCCATGGCAGCGCTCTAATCCAAACTGAAGAAAATCTTCAA
AAACAGGAAAGAAAATATACAAAAAATTTGGAAAAGAAATTAGTGCCTCTACTGCTCGTTGACGGAGAATTTCAGTCTAAATCTTCTTTACGATACGCAGATCGA
GTCATCTCTGCTATGGAAGCAGTGATTGTTGTTGAGCAGCATAGGAACCAATATTATGGTCGGATCGAGCCGCATGGACCAGCTCGATTTGAATCACCCCCTTCC
CGGGACTTCAGAGGGATGAACTGTAGGAGTTTCCAGTCGGGAGCTGGTATACTCCCAACTCCCTTGAAGGCTTGTATCTCTGGAACTAAACATGTCTACCCTTCT
TCCCCCAAGACACCCCCAACTTGTTTAAGTTCCAACGCCGGAAATGGCAAACAACTTGCTAGTGTGAAAAGTGCTCCAATTCCCATCACTGCCAAATTTTCAAAC
AAGAACAGTGCTTTGCATGAAGAGTTTTATGACCGAAATTTCTCATTCTCTGAGCTTTGGGCTGGACCCACTTACTCAAATTCACCGCCACCAAGTTCATTACCC
ATTCCCAAATTTTCAGTTGCTAAGAGAACCAAGTCACTGGAGTTGCCTCGCTCTGCACCTGAATTTGAAATGCATCGTCCATCTGCCAAGTCTGCACCACCATCC
CCAACTCGGGAGCTTGAGTCTTCCTCCAGGTTTATCTTTCATAGTGCTGACTCTGCGACTAAGACACTACGTCGCATTCTTAATCTAGATGTCGACAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTGGAACCATTTCAGATCCGTCGATTCTGGTTCAAACCCTCGCTCGGGGCTCAATCTCCATGGCAGCGCTCTAATCCAAACTGAAGAAAATCTTCAA
AAACAGGAAAGAAAATATACAAAAAATTTGGAAAAGAAATTAGTGCCTCTACTGCTCGTTGACGGAGAATTTCAGTCTAAATCTTCTTTACGATACGCAGATCGA
GTCATCTCTGCTATGGAAGCAGTGATTGTTGTTGAGCAGCATAGGAACCAATATTATGGTCGGATCGAGCCGCATGGACCAGCTCGATTTGAATCACCCCCTTCC
CGGGACTTCAGAGGGATGAACTGTAGGAGTTTCCAGTCGGGAGCTGGTATACTCCCAACTCCCTTGAAGGCTTGTATCTCTGGAACTAAACATGTCTACCCTTCT
TCCCCCAAGACACCCCCAACTTGTTTAAGTTCCAACGCCGGAAATGGCAAACAACTTGCTAGTGTGAAAAGTGCTCCAATTCCCATCACTGCCAAATTTTCAAAC
AAGAACAGTGCTTTGCATGAAGAGTTTTATGACCGAAATTTCTCATTCTCTGAGCTTTGGGCTGGACCCACTTACTCAAATTCACCGCCACCAAGTTCATTACCC
ATTCCCAAATTTTCAGTTGCTAAGAGAACCAAGTCACTGGAGTTGCCTCGCTCTGCACCTGAATTTGAAATGCATCGTCCATCTGCCAAGTCTGCACCACCATCC
CCAACTCGGGAGCTTGAGTCTTCCTCCAGGTTTATCTTTCATAGTGCTGACTCTGCGACTAAGACACTACGTCGCATTCTTAATCTAGATGTCGACAATGAATGA
Protein sequenceShow/hide protein sequence
MQLWNHFRSVDSGSNPRSGLNLHGSALIQTEENLQKQERKYTKNLEKKLVPLLLVDGEFQSKSSLRYADRVISAMEAVIVVEQHRNQYYGRIEPHGPARFESPPS
RDFRGMNCRSFQSGAGILPTPLKACISGTKHVYPSSPKTPPTCLSSNAGNGKQLASVKSAPIPITAKFSNKNSALHEEFYDRNFSFSELWAGPTYSNSPPPSSLP
IPKFSVAKRTKSLELPRSAPEFEMHRPSAKSAPPSPTRELESSSRFIFHSADSATKTLRRILNLDVDNE