CuGenDBv2

Gene ID	CmoCh19G000320
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Spindle pole body-associated protein
Genome location	Cmo_Chr19:185997..189292
RNA-Seq Expression	CmoCh19G000320
Synteny	CmoCh19G000320
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571465.1 hypothetical protein SDJN03_28193, partial [Cucurbita argyrosperma subsp. sororia]

8.5e-79

98.69

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKV
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRK+
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKV

KAG7011228.1 hypothetical protein SDJN02_26131 [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-87

99.4

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

XP_022963485.1 uncharacterized protein LOC111463803 [Cucurbita moschata]

2.2e-87

100

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]

5.5e-86

97.6

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]

1.2e-85

97.6

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTG LVIASSWLLIKSIAVTAVVL LICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KED9 Uncharacterized protein

3.7e-72

82.14

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Query:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTV
        MG VS FLA+SLR + FP STQTLLSNFAASSQ +SFTP CT+FR K++VFGKQS N+++SQFLDENG VNDMDGYLNYHSFEYDSVWDTKP+WCQPWT+
Subjt:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTV

Query:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        TLTG LVIASSW+ IKSIAVTAV+L LIC WWYIFLYSYPKAY++MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X1

3.7e-72

82.14

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Query:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTV
        MG +SL LATSL S+HFP STQTLLSNFAASSQ +SFTPKCT+FR K++VFGKQS  +++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWT+
Subjt:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTV

Query:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        TLTG LVIASSW+ IKS+AVTAV+L LIC WWYIFLYSYPKAY++MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1CY32 uncharacterized protein LOC111015275

1.6e-67

76.92

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Query:  MGTVSLFLATSLRSHHFP--STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT
        +  V LFLATSLRSHHFP  STQTLL+NF A+SQ VS TP+CT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPWT
Subjt:  MGTVSLFLATSLRSHHFP--STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT

Query:  VTLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        +TLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAY++MIAERR+KV+DG EDTFGV++TQ
Subjt:  VTLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1HI50 uncharacterized protein LOC111463803

1.1e-87

100

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1HWP2 uncharacterized protein LOC111466970

2.7e-86

97.6

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02725.1 unknown protein

3.5e-38

48.1

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Query:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVTLTGS
        SL ++    S   P T+ LLS  +  +   SF  K  R   K   FG       +S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWT+ LTG 
Subjt:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVTLTGS

Query:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFG
         ++A SW+++ S+ V+++ + +I +WWYIFLYSYPK+Y++MIAERR++V+DG ED +G
Subjt:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFG

AT4G02725.2 unknown protein

6.6e-29

46.32

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Query:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVTLTGS
        SL ++    S   P T+ LLS  +  +   SF  K  R   K   FG       +S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWT+ LTG 
Subjt:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVTLTGS

Query:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPK
         ++A SW+++ S+ V+++ + +I +WWYIFLYSYPK
Subjt:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPK

Sequences

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CDS sequence

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ATGGGAACCGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCATCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGCCGTTTCGTTTAC
TCCCAAATGCACTAGATTCCGCCGGAAAAGCGTTGTTTTCGGGAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATG
GATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTGTAACACTGACAGGATCACTAGTAATTGCCTCTAGC
TGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCTCATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATACTGATATGATTGC
GGAGCGAAGAAGAAAGGTTAGTGATGGAGTTGAAGACACATTTGGTGTGAAAAGGACACAGTGA

mRNA sequence

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CGGGTGCATCGAATTTTGTGGGGCCATGAAGTTTATCCTTTGCAAAGCTTTCTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATCAGCAGACTACTTGG
AAGTGGCCGCCATACAAAAACCCAAATCTATGGGAACCGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCATCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTC
GCAGCTTCGTCGCAAGCCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTTGTTTTCGGGAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGA
TGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTGTAACAC
TGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCTCATGGTGGTACATCTTTCTTTACTCA
TACCCAAAGGCTTATACTGATATGATTGCGGAGCGAAGAAGAAAGGTTAGTGATGGAGTTGAAGACACATTTGGTGTGAAAAGGACACAGTGATTACCGCCTGCTTCTCT
TCTTCTACGAGGCTTTTGCTGGCTTCTGTGGGCTACGTGCTCTATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAAGTGAACCAAGTGTTTC
TTTTCAGACTCTTAAACCAATGCATAGTTCTTTTAAAATCTTTGATTTTAGATACTGTTTTGGTTTTGATTCATTTTCGTTCGTGGACTTTCAAAATATTCGTTTTAGTC
CTTGTACTTTTAAAAAGTGACT

Protein sequence

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MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTVTLTGSLVIASS
WLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

CmoCh19G000320 (gene) of Cucurbita moschata (Rifu) v1 genome