; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G001660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G001660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCmo_Chr19:1049303..1050282
RNA-Seq ExpressionCmoCh19G001660
SyntenyCmoCh19G001660
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.2e-13985.37Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAK+I   A V GQW+R+VWSHNLLEEIEL++  LSEFPIVA+DTEFPGFLRWTPKGVSDEEFY+CLQFNVNRLSILQLGLTLT+DNGKIGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FD+ISNMEGVYSLDSFLKNKGFNFN LRS GIAP+EF RQF P++RSGRI +WITFHGLYDIAYLMK  NI  MPTSMS+FA+ AAHLLGTVTDLKHMAR
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS
         S+YLFNGNLGLKKLAKLLQ+NR GTAHFAGSDSLLTASVYAKMK+IMKVE KI EGFLYGLPYPIQGYR PVVIVDPSKLTD RIS
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.0e-15193.4Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAKMIGEVA VEGQW+RDVWSHNLLEEIELI+QCLSEFPIVA+DTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFG QF+PILRSGRIHRWITFHGLYDIAYLMK TNI CMPTSMSIFAITAAH+LGTVTDLKHMA 
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISI
         S  L +GNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVE  I EGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISI
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISI

XP_022963785.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]9.3e-166100Show/hide
Query:  MIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDK
        MIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDK
Subjt:  MIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDK

Query:  ISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSN
        ISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSN
Subjt:  ISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSN

Query:  YLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG
        YLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG
Subjt:  YLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG

XP_023511526.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]7.9e-14990.59Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAKMI EVA VEGQW+RDVWSHNL EEIELI+QCLSEFPIVA+DTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FDKISNMEGVYSLDSFLKNKGFNFN LRSYGIAP+EFG+QFNPILRSG+I RWITFHGLYDIAYLMK T I CMPTSMS+FAI+AAH+LGTVTDLKHMAR
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS
         SN L NGNLGLK+LAKLLQVNRTGTAHFAGSDSLLTA+VYAKMKIIMKVE K  EGFLYGLPYPIQGYRRP+VIVDPSKLTDGRIS
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS

XP_023511528.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]2.1e-14990.59Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        M KMIGEVA VEGQW+RDVWSHNLLEEIELI+QCLSEFPIVA+DTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAP+EFG+QFN ILRSG+I RWITFHG YDIAYLMK T + CMPTSMS+FAI+AAH+LGTVTDLKHMAR
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS
         SN L NGNLGLK+LAKLLQVNRTGTAHFAGSDSLLTA++YAKMKIIMKVE KI EGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS

TrEMBL top hitse value%identityAlignment
A0A6J1ESM7 Poly(A)-specific ribonuclease5.6e-14085.37Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAK+I   A V GQW+R+VWSHNLLEEIEL++  LSEFPIVA+DTEFPGFLRWTPKGVSDEEFY+CLQFNVNRLSILQLGLTLT+DNGKIGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FD+ISNMEGVYSLDSFLKNKGFNFN LRS GIAP+EF RQF P++RSGRI +WITFHGLYDIAYLMK  NI  MPTSMS+FA+ AAHLLGTVTDLKHMAR
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS
         S+YLFNGNLGLKKLAKLLQ+NR GTAHFAGSDSLLTASVYAKMK+IMKVE KI EGFLYGLPYPIQGYR PVVIVDPSKLTD RIS
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRIS

A0A6J1HIZ7 Poly(A)-specific ribonuclease4.5e-166100Show/hide
Query:  MIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDK
        MIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDK
Subjt:  MIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDK

Query:  ISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSN
        ISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSN
Subjt:  ISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSN

Query:  YLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG
        YLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG
Subjt:  YLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG

A0A6J1HL76 Poly(A)-specific ribonuclease4.9e-15293.4Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAKMIGEVA VEGQW+RDVWSHNLLEEIELI+QCLSEFPIVA+DTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFG QF+PILRSGRIHRWITFHGLYDIAYLMK TNI CMPTSMSIFAITAAH+LGTVTDLKHMA 
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISI
         S  L +GNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVE  I EGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISI
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISI

A0A6J1HSR3 Poly(A)-specific ribonuclease1.2e-13986.71Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAK+IGE A V G+W+RDVWSHNLLEEIEL++ CLSEFPIVAMDTEFPGFLR TPKGVSDEEFY+CLQFNVNRLSILQLGLTLT++NG+IGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FDKISNMEGVYSLDSFLKNKGFNFN LRS GI+PEEF RQFNPILRSGRI RWITFHGLYDIAYLMK TNI CMPTSMS FAI AAHLLGTVTDLKHMAR
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRI
         S+YL NGNLGLKKLAK+LQVNR GTAHFAGSDSLLTASVYAKM++IMKV+ KI EGFLYGLPYPIQGYR PVVIVDP KLT  RI
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRI

A0A6J1HXB4 Poly(A)-specific ribonuclease2.1e-13986.36Show/hide
Query:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD
        MAK+IGE A V G+W+RDVWSHNLLEEIEL++ CLSEFPIVAMDTEFPGFLR TPKGVSDEEFY+CLQFNVNRLSILQLGLTLT++NG+IGMTWEFNF+D
Subjt:  MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKD

Query:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR
        FDKISNMEGVYSLDSFLKNKGFNFN LRS GI+PEEF RQFNPILRSGRI RWITFHGLYDIAYLMK TNI CMPTSMS FAI AAHLLGTVTDLKHMAR
Subjt:  FDKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMAR

Query:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRI
         S+YL NGNLGLKKLAK+LQVNR GTAHFAGSDS LTASVYAKM++IMKV+ KI EGFLYGLPYPIQGYR PVVIVDP KLT  RI
Subjt:  CSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRI

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 52.9e-3741.56Show/hide
Query:  DVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSFL
        +VW  N   E+  I+ CL     +A+DTEFPG L+ TP   SDE  Y  ++FNV+   ++QLGLTL      I  TWE N  DF++  +++   S+ +FL
Subjt:  DVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSFL

Query:  KNKGFNFNTLRSYGIAPEEFGRQFNPIL--RSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGT-VTDLKHMA-RCSNYLFNGNLGLK
        KN G + + +R  GI  EEF  +F+ IL  + G++ RW+TF G YD AYL+K      +P +   F  T   LLG  V D+K MA  CS    +   GL+
Subjt:  KNKGFNFNTLRSYGIAPEEFGRQFNPIL--RSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGT-VTDLKHMA-RCSNYLFNGNLGLK

Query:  KLAKLLQVNRTGTAHFAGSDSLLTASVYAKM
        ++A +LQ+ R G AH AGSDS LTA V+ K+
Subjt:  KLAKLLQVNRTGTAHFAGSDSLLTASVYAKM

Q9C6M9 Putative CCR4-associated factor 1 homolog 45.5e-3641.38Show/hide
Query:  DVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSFL
        +VW  N   E++ I+ CL  F  +A+DTEFPG L+ TP   S+E  Y  ++FNV+   ++QLG TL +  G I  TWE N  DF++    +   S+ +FL
Subjt:  DVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSFL

Query:  KNKGFNFNTLRSYGIAPEEFGRQFNPIL--RSGRIHRWITFHGLYDIAYLMK-LTNITCMPTSMSIFAITAAHLLGT-VTDLKHMAR-CSNYLFNGNLGL
        K+ G N + +   GI  EEF R F+ IL  + G+I  W+ F G YD AYL+K LT    +P +   F  T   LLG  V D+K +A  CS    +   GL
Subjt:  KNKGFNFNTLRSYGIAPEEFGRQFNPIL--RSGRIHRWITFHGLYDIAYLMK-LTNITCMPTSMSIFAITAAHLLGT-VTDLKHMAR-CSNYLFNGNLGL

Query:  KKLAKLLQVNRTGTAHFAGSDSLLTASVYAKM
        +++A +LQ+ R G AH AGSDS LTA V+ K+
Subjt:  KKLAKLLQVNRTGTAHFAGSDSLLTASVYAKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.0e-3842.53Show/hide
Query:  IELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDF--DKISNMEGVYSLDSFLKNKGFNFN
        + LI+ CL  +  +A+DTEFP  LR T +  +DEE Y  + F+V+R  ++QLGLTL + NG+IG TWE NF DF  D   N + +     FL+  G +  
Subjt:  IELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDF--DKISNMEGVYSLDSFLKNKGFNFN

Query:  TLRSYGIAPEE-FGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA-RCSNYLFNGNLGLKKLAKLLQVNR
         +R  GI  E  F   F  + ++ R   W+TFHG YDIAYL+K      +P +   F+   A +LG+V DLK MA RC     +  LGL+ LA    +NR
Subjt:  TLRSYGIAPEE-FGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA-RCSNYLFNGNLGLKKLAKLLQVNR

Query:  TGTAHFAGSDSLLTASVYAKM
         GTAH AGS++ LTA V+AK+
Subjt:  TGTAHFAGSDSLLTASVYAKM

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.9e-3635.58Show/hide
Query:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWT--------PKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKI-------GMTWEFNFKDF
        R+VW+HNL +E+ LI+Q + +FP VAMDTEFPG +  T        P  +  E  Y+ L+ NVN L ++QLGLTL+++ G +          W+FNF++F
Subjt:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWT--------PKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKI-------GMTWEFNFKDF

Query:  DKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQF--NPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA
        + IS+M  + S++  L+    +       G+  + F      + ++ + +IH W+TFH  YD  YL+KL +   +P  +S F          V D+K++ 
Subjt:  DKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQF--NPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA

Query:  RCSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKID-EGFLYGLPYP
             L+    GL+K+A+LL V R G +H AGSDSLLT   + KMK        +   GFL+GL  P
Subjt:  RCSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKID-EGFLYGLPYP

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.2e-3837.2Show/hide
Query:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSF
        R VW  N+ EE+  + +CL  FP++A DTE+PG +  T    S +E Y  ++ NV    ++Q G TL N  G+IG  WE NF +F   S+     S++ F
Subjt:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSF

Query:  LKNKGFNFNTLRSYGIAPEEFGRQFNP----ILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSNYLFNGNLGL
        L+  G +   +R  G+  + FG  F P    + RS +   ++TF G YD AY + + N   +P +   FA     + G V D K MA     L   +LGL
Subjt:  LKNKGFNFNTLRSYGIAPEEFGRQFNP----ILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSNYLFNGNLGL

Query:  KKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGL
         KLA+LLQ+ R G AH AGSDSL+TA V+ K+K + + + +   G +YG+
Subjt:  KKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.5e-4037.2Show/hide
Query:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSF
        R VW  N+ EE+  + +CL  FP++A DTE+PG +  T    S +E Y  ++ NV    ++Q G TL N  G+IG  WE NF +F   S+     S++ F
Subjt:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSF

Query:  LKNKGFNFNTLRSYGIAPEEFGRQFNP----ILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSNYLFNGNLGL
        L+  G +   +R  G+  + FG  F P    + RS +   ++TF G YD AY + + N   +P +   FA     + G V D K MA     L   +LGL
Subjt:  LKNKGFNFNTLRSYGIAPEEFGRQFNP----ILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSNYLFNGNLGL

Query:  KKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGL
         KLA+LLQ+ R G AH AGSDSL+TA V+ K+K + + + +   G +YG+
Subjt:  KKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGL

AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-3735.58Show/hide
Query:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWT--------PKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKI-------GMTWEFNFKDF
        R+VW+HNL +E+ LI+Q + +FP VAMDTEFPG +  T        P  +  E  Y+ L+ NVN L ++QLGLTL+++ G +          W+FNF++F
Subjt:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWT--------PKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKI-------GMTWEFNFKDF

Query:  DKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQF--NPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA
        + IS+M  + S++  L+    +       G+  + F      + ++ + +IH W+TFH  YD  YL+KL +   +P  +S F          V D+K++ 
Subjt:  DKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQF--NPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA

Query:  RCSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKID-EGFLYGLPYP
             L+    GL+K+A+LL V R G +H AGSDSLLT   + KMK        +   GFL+GL  P
Subjt:  RCSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKID-EGFLYGLPYP

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-3735.58Show/hide
Query:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWT--------PKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKI-------GMTWEFNFKDF
        R+VW+HNL +E+ LI+Q + +FP VAMDTEFPG +  T        P  +  E  Y+ L+ NVN L ++QLGLTL+++ G +          W+FNF++F
Subjt:  RDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWT--------PKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKI-------GMTWEFNFKDF

Query:  DKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQF--NPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA
        + IS+M  + S++  L+    +       G+  + F      + ++ + +IH W+TFH  YD  YL+KL +   +P  +S F          V D+K++ 
Subjt:  DKISNMEGVYSLDSFLKNKGFNFNTLRSYGIAPEEFGRQF--NPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA

Query:  RCSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKID-EGFLYGLPYP
             L+    GL+K+A+LL V R G +H AGSDSLLT   + KMK        +   GFL+GL  P
Subjt:  RCSNYLFNGNLGLKKLAKLLQVNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKID-EGFLYGLPYP

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-3841.56Show/hide
Query:  DVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSFL
        +VW  N   E+  I+ CL     +A+DTEFPG L+ TP   SDE  Y  ++FNV+   ++QLGLTL      I  TWE N  DF++  +++   S+ +FL
Subjt:  DVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGVYSLDSFL

Query:  KNKGFNFNTLRSYGIAPEEFGRQFNPIL--RSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGT-VTDLKHMA-RCSNYLFNGNLGLK
        KN G + + +R  GI  EEF  +F+ IL  + G++ RW+TF G YD AYL+K      +P +   F  T   LLG  V D+K MA  CS    +   GL+
Subjt:  KNKGFNFNTLRSYGIAPEEFGRQFNPIL--RSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGT-VTDLKHMA-RCSNYLFNGNLGLK

Query:  KLAKLLQVNRTGTAHFAGSDSLLTASVYAKM
        ++A +LQ+ R G AH AGSDS LTA V+ K+
Subjt:  KLAKLLQVNRTGTAHFAGSDSLLTASVYAKM

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-3942.53Show/hide
Query:  IELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDF--DKISNMEGVYSLDSFLKNKGFNFN
        + LI+ CL  +  +A+DTEFP  LR T +  +DEE Y  + F+V+R  ++QLGLTL + NG+IG TWE NF DF  D   N + +     FL+  G +  
Subjt:  IELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDF--DKISNMEGVYSLDSFLKNKGFNFN

Query:  TLRSYGIAPEE-FGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA-RCSNYLFNGNLGLKKLAKLLQVNR
         +R  GI  E  F   F  + ++ R   W+TFHG YDIAYL+K      +P +   F+   A +LG+V DLK MA RC     +  LGL+ LA    +NR
Subjt:  TLRSYGIAPEE-FGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMA-RCSNYLFNGNLGLKKLAKLLQVNR

Query:  TGTAHFAGSDSLLTASVYAKM
         GTAH AGS++ LTA V+AK+
Subjt:  TGTAHFAGSDSLLTASVYAKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAATGATTGGAGAAGTTGCTACAGTGGAAGGACAATGGGAGAGAGACGTTTGGTCTCACAATTTATTGGAGGAGATAGAACTTATACAGCAGTGTTTATCCGA
ATTCCCAATTGTGGCTATGGACACTGAGTTTCCAGGATTTTTAAGATGGACTCCCAAAGGTGTTTCAGATGAAGAATTTTATGAATGCCTGCAATTCAACGTCAATCGAC
TGAGCATCCTACAGTTAGGACTCACACTCACGAATGATAATGGAAAAATAGGAATGACGTGGGAGTTTAACTTTAAAGATTTCGATAAAATTAGTAATATGGAGGGTGTT
TATTCCCTTGATTCATTTCTAAAAAATAAAGGATTTAATTTTAATACATTGAGGAGCTATGGAATTGCTCCCGAAGAATTTGGTAGACAATTTAACCCTATTCTTCGAAG
CGGTAGAATACATAGATGGATAACCTTTCATGGATTGTATGACATTGCCTATTTAATGAAGCTTACCAACATAACATGCATGCCTACGTCCATGTCTATTTTCGCCATCA
CTGCTGCACATCTACTGGGAACAGTCACCGACCTCAAACATATGGCTCGGTGCTCCAACTACTTGTTCAATGGCAACCTGGGGTTAAAAAAATTGGCTAAGCTGCTCCAA
GTTAATCGCACTGGTACTGCCCACTTTGCTGGGTCTGACAGTTTACTTACGGCGTCAGTTTATGCCAAGATGAAGATAATTATGAAGGTTGAACAAAAAATAGACGAAGG
ATTTTTATATGGATTACCATATCCCATTCAGGGTTACAGACGACCCGTTGTAATTGTAGATCCATCAAAGTTAACCGACGGTCGTATTTCAATTGGTAGAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAATGATTGGAGAAGTTGCTACAGTGGAAGGACAATGGGAGAGAGACGTTTGGTCTCACAATTTATTGGAGGAGATAGAACTTATACAGCAGTGTTTATCCGA
ATTCCCAATTGTGGCTATGGACACTGAGTTTCCAGGATTTTTAAGATGGACTCCCAAAGGTGTTTCAGATGAAGAATTTTATGAATGCCTGCAATTCAACGTCAATCGAC
TGAGCATCCTACAGTTAGGACTCACACTCACGAATGATAATGGAAAAATAGGAATGACGTGGGAGTTTAACTTTAAAGATTTCGATAAAATTAGTAATATGGAGGGTGTT
TATTCCCTTGATTCATTTCTAAAAAATAAAGGATTTAATTTTAATACATTGAGGAGCTATGGAATTGCTCCCGAAGAATTTGGTAGACAATTTAACCCTATTCTTCGAAG
CGGTAGAATACATAGATGGATAACCTTTCATGGATTGTATGACATTGCCTATTTAATGAAGCTTACCAACATAACATGCATGCCTACGTCCATGTCTATTTTCGCCATCA
CTGCTGCACATCTACTGGGAACAGTCACCGACCTCAAACATATGGCTCGGTGCTCCAACTACTTGTTCAATGGCAACCTGGGGTTAAAAAAATTGGCTAAGCTGCTCCAA
GTTAATCGCACTGGTACTGCCCACTTTGCTGGGTCTGACAGTTTACTTACGGCGTCAGTTTATGCCAAGATGAAGATAATTATGAAGGTTGAACAAAAAATAGACGAAGG
ATTTTTATATGGATTACCATATCCCATTCAGGGTTACAGACGACCCGTTGTAATTGTAGATCCATCAAAGTTAACCGACGGTCGTATTTCAATTGGTAGAGGGTAG
Protein sequenceShow/hide protein sequence
MAKMIGEVATVEGQWERDVWSHNLLEEIELIQQCLSEFPIVAMDTEFPGFLRWTPKGVSDEEFYECLQFNVNRLSILQLGLTLTNDNGKIGMTWEFNFKDFDKISNMEGV
YSLDSFLKNKGFNFNTLRSYGIAPEEFGRQFNPILRSGRIHRWITFHGLYDIAYLMKLTNITCMPTSMSIFAITAAHLLGTVTDLKHMARCSNYLFNGNLGLKKLAKLLQ
VNRTGTAHFAGSDSLLTASVYAKMKIIMKVEQKIDEGFLYGLPYPIQGYRRPVVIVDPSKLTDGRISIGRG