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CmoCh19G001950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G001950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGEM-like protein 2
Genome locationCmo_Chr19:1262193..1265895
RNA-Seq ExpressionCmoCh19G001950
SyntenyCmoCh19G001950
Gene Ontology termsNA
InterPro domainsIPR037848 - GEM-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460398.1 PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]7.6e-2535.32Show/hide
Query:  IDTIYSMSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----------------------------------
        +DTI++MSN LD+++N YVQ SSAS SPNGKYKMWE LD C K FEDCS+ +EA AD  WNH+                                     
Subjt:  IDTIYSMSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----------------------------------

Query:  --------------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEY
                                              LCYYPSPGQPQWILYK                                              
Subjt:  --------------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEY

Query:  VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF
        +VIAVDQ+ +IN  SN M+PSQKYIQ+IT DSHEF
Subjt:  VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF

XP_022159858.1 GEM-like protein 2 [Momordica charantia]1.5e-2039.25Show/hide
Query:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSFLCYYPSPGQPQWILYKNPTGIINRTNHRRSFVE--------
        MSN LD ++NPYVQ+SSAS SPNGK KMWE L  C K  EDCSR +E  ADS  +HL      PS            T ++    + + F +        
Subjt:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSFLCYYPSPGQPQWILYKNPTGIINRTNHRRSFVE--------

Query:  -----FLVLLSIFFAQGSSVNVFSWVPFHDCDEY-----------------VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF
             F   LS      +     S      C E+                 VV+AVDQLG IN  SN ++PSQKYIQ+ITRD HEF
Subjt:  -----FLVLLSIFFAQGSSVNVFSWVPFHDCDEY-----------------VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF

XP_022967352.1 GEM-like protein 2, partial [Cucurbita maxima]4.6e-2292.98Show/hide
Query:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHL
        MSNPLDAKDNPYVQYSSAS SPNGKYKMWEALD C KTFEDCSRMIEAVADS WNHL
Subjt:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHL

XP_038887653.1 GEM-like protein 2 isoform X1 [Benincasa hispida]1.9e-2336.52Show/hide
Query:  MSNPLDAKDNPYVQYSSASPSPNGKY-KMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF----------------------------------------
        M N LD KDNPYV YSSAS SPNGK  KM E LD C K F DCS+M+EA AD  WNHL                                          
Subjt:  MSNPLDAKDNPYVQYSSASPSPNGKY-KMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF----------------------------------------

Query:  ---------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAV
                                         LCYYPSPG+PQWILYK                                              V+IAV
Subjt:  ---------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAV

Query:  DQLGQIN-PSNLMEPSQKYIQIITRDSHEF
        DQLG+IN  SNLM+PSQKYIQ+ITRDSHEF
Subjt:  DQLGQIN-PSNLMEPSQKYIQIITRDSHEF

XP_038887655.1 GEM-like protein 2 isoform X2 [Benincasa hispida]6.9e-2637.12Show/hide
Query:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----------------------------------------
        M N LD KDNPYV YSSAS SPNGKYKM E LD C K F DCS+M+EA AD  WNHL                                           
Subjt:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----------------------------------------

Query:  --------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVD
                                        LCYYPSPG+PQWILYK                                              V+IAVD
Subjt:  --------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVD

Query:  QLGQIN-PSNLMEPSQKYIQIITRDSHEF
        QLG+IN  SNLM+PSQKYIQ+ITRDSHEF
Subjt:  QLGQIN-PSNLMEPSQKYIQIITRDSHEF

TrEMBL top hitse value%identityAlignment
A0A1S3CCD7 GEM-like protein 2 isoform X23.7e-2535.32Show/hide
Query:  IDTIYSMSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----------------------------------
        +DTI++MSN LD+++N YVQ SSAS SPNGKYKMWE LD C K FEDCS+ +EA AD  WNH+                                     
Subjt:  IDTIYSMSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----------------------------------

Query:  --------------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEY
                                              LCYYPSPGQPQWILYK                                              
Subjt:  --------------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEY

Query:  VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF
        +VIAVDQ+ +IN  SN M+PSQKYIQ+IT DSHEF
Subjt:  VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF

A0A1S3CCH4 GEM-like protein 2 isoform X12.3e-1930.94Show/hide
Query:  IDTIYSMSNPLDAKDNPYVQYSSASPSPNGKY------------------------------KMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----
        +DTI++MSN LD+++N YVQ SSAS SPNGK                               KMWE LD C K FEDCS+ +EA AD  WNH+       
Subjt:  IDTIYSMSNPLDAKDNPYVQYSSASPSPNGKY------------------------------KMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF-----

Query:  --------------------------------------------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFV
                                                                            LCYYPSPGQPQWILYK                
Subjt:  --------------------------------------------------------------------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFV

Query:  EFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF
                                      +VIAVDQ+ +IN  SN M+PSQKYIQ+IT DSHEF
Subjt:  EFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF

A0A1S3CCV4 GEM-like protein 2 isoform X35.5e-1330.39Show/hide
Query:  YKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF------------------------------------------------------------------
        YKMWE LD C K FEDCS+ +EA AD  WNH+                                                                    
Subjt:  YKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSF------------------------------------------------------------------

Query:  -------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVDQLGQIN-PSNLMEPSQKYIQIITRD
               LCYYPSPGQPQWILYK                                              +VIAVDQ+ +IN  SN M+PSQKYIQ+IT D
Subjt:  -------LCYYPSPGQPQWILYKNPTGIINRTNHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVDQLGQIN-PSNLMEPSQKYIQIITRD

Query:  SHEF
        SHEF
Subjt:  SHEF

A0A6J1E018 GEM-like protein 27.2e-2139.25Show/hide
Query:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSFLCYYPSPGQPQWILYKNPTGIINRTNHRRSFVE--------
        MSN LD ++NPYVQ+SSAS SPNGK KMWE L  C K  EDCSR +E  ADS  +HL      PS            T ++    + + F +        
Subjt:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSFLCYYPSPGQPQWILYKNPTGIINRTNHRRSFVE--------

Query:  -----FLVLLSIFFAQGSSVNVFSWVPFHDCDEY-----------------VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF
             F   LS      +     S      C E+                 VV+AVDQLG IN  SN ++PSQKYIQ+ITRD HEF
Subjt:  -----FLVLLSIFFAQGSSVNVFSWVPFHDCDEY-----------------VVIAVDQLGQIN-PSNLMEPSQKYIQIITRDSHEF

A0A6J1HQK3 GEM-like protein 22.2e-2292.98Show/hide
Query:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHL
        MSNPLDAKDNPYVQYSSAS SPNGKYKMWEALD C KTFEDCSRMIEAVADS WNHL
Subjt:  MSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G40100.1 GRAM domain family protein6.1e-0452.78Show/hide
Query:  YVVIAVDQLGQINPS-NLMEPSQKYIQIITRDSHEF
        YVVI + QL  +NPS + + P++KYIQ+I+ D HEF
Subjt:  YVVIAVDQLGQINPS-NLMEPSQKYIQIITRDSHEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCAGATGAACTGAGTTTCTGCCTCCTCTCTGCATCCCATGTCTATCGTATCGGGATCGACACAATCTACAGCATGAGCAATCCCCTTGACGCCAAAGACAACCC
TTATGTTCAGTATTCCTCTGCTTCCCCATCCCCAAATGGGAAATATAAGATGTGGGAAGCGTTGGATTGGTGCAGGAAGACGTTTGAAGATTGTTCTAGGATGATTGAGG
CTGTAGCAGATAGCTTCTGGAATCACTTAAGTTTCCTCTGTTACTATCCATCTCCTGGCCAGCCACAGTGGATCCTTTACAAGAACCCAACTGGAATAATTAACCGAACG
AATCACCGGAGGAGTTTCGTCGAGTTTCTTGTCCTTTTATCTATCTTTTTCGCTCAAGGATCTTCTGTTAATGTCTTTAGTTGGGTTCCTTTTCATGACTGTGATGAATA
TGTGGTGATAGCGGTTGATCAGTTGGGGCAAATCAACCCTTCAAATCTTATGGAGCCCTCACAAAAATACATCCAAATAATCACGAGGGACTCTCATGAATTC
mRNA sequenceShow/hide mRNA sequence
ATGAACCCAGATGAACTGAGTTTCTGCCTCCTCTCTGCATCCCATGTCTATCGTATCGGGATCGACACAATCTACAGCATGAGCAATCCCCTTGACGCCAAAGACAACCC
TTATGTTCAGTATTCCTCTGCTTCCCCATCCCCAAATGGGAAATATAAGATGTGGGAAGCGTTGGATTGGTGCAGGAAGACGTTTGAAGATTGTTCTAGGATGATTGAGG
CTGTAGCAGATAGCTTCTGGAATCACTTAAGTTTCCTCTGTTACTATCCATCTCCTGGCCAGCCACAGTGGATCCTTTACAAGAACCCAACTGGAATAATTAACCGAACG
AATCACCGGAGGAGTTTCGTCGAGTTTCTTGTCCTTTTATCTATCTTTTTCGCTCAAGGATCTTCTGTTAATGTCTTTAGTTGGGTTCCTTTTCATGACTGTGATGAATA
TGTGGTGATAGCGGTTGATCAGTTGGGGCAAATCAACCCTTCAAATCTTATGGAGCCCTCACAAAAATACATCCAAATAATCACGAGGGACTCTCATGAATTC
Protein sequenceShow/hide protein sequence
MNPDELSFCLLSASHVYRIGIDTIYSMSNPLDAKDNPYVQYSSASPSPNGKYKMWEALDWCRKTFEDCSRMIEAVADSFWNHLSFLCYYPSPGQPQWILYKNPTGIINRT
NHRRSFVEFLVLLSIFFAQGSSVNVFSWVPFHDCDEYVVIAVDQLGQINPSNLMEPSQKYIQIITRDSHEF